Arvicanthis niloticus (African grass rat): 117709631
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Entry
117709631 CDS
T08817
Symbol
Hmgcl
Name
(RefSeq) hydroxymethylglutaryl-CoA lyase, mitochondrial
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu00280
Valine, leucine and isoleucine degradation
anu00650
Butanoate metabolism
anu01100
Metabolic pathways
anu04146
Peroxisome
Module
anu_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
117709631 (Hmgcl)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
117709631 (Hmgcl)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
117709631 (Hmgcl)
Enzymes [BR:
anu01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
117709631 (Hmgcl)
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Motif
Pfam:
HMGL-like
Motif
Other DBs
NCBI-GeneID:
117709631
NCBI-ProteinID:
XP_034360008
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Position
5:complement(18895483..18909597)
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AA seq
325 aa
AA seq
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MATVRKAFPRRLVGLASLRAMSTSSMGALPKRVKIVEVGPRDGLQNEKTIVPTPVKIKLI
DMLSEAGLPVIEATSFVSPKWVPQMADHSDVLKGIQKFPGVNYPVLTPNMKGFEEAVAAG
AKEVSIFGAASELFTRKNVNCSIEESFQRFDGVMQAARAAGILVRGYVSCVVGCPYEGKV
SPAKVAEVAKKLYSMGCYEISLGDTIGVGTPGLMKDMLTAVMHEVPVTALAVHCHDTYGQ
ALANTLVALQMGVSVVDSSVAGLGGCPYAKGASGNLATEDLVYMLTGLGIHTGVNLQKLL
EAGDFICQALNRKTSSKVAQATCKL
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atggcgacagtgaggaaggctttcccgcggagactggtgggcttggcatccctccgagct
atgagcacctcctccatgggcgcattgccaaagcgggtgaagatcgtggaagttggtccc
cgagacggtctgcagaatgaaaagactattgtaccaaccccagtgaaaatcaagctgata
gacatgctctccgaagcagggctccctgttattgaggccaccagctttgtctctcccaag
tgggtgccccagatggctgaccactctgacgtattgaagggcattcagaagtttcctggc
gtcaactacccagtcctgactccaaacatgaaaggctttgaggaagcggtagccgcaggt
gccaaggaagtgagtatcttcggggctgcatctgaactcttcacccggaagaatgtgaac
tgctctatagaggagagtttccagcgctttgatggagtcatgcaagctgcgcgggccgcc
ggcatccttgtgagaggatacgtctcctgtgtcgtcggatgcccctacgaggggaaggtg
tccccggctaaagttgctgaggtcgccaagaagctgtactcaatgggctgctatgagatc
tcccttggggacaccatcggcgtaggcaccccaggacttatgaaagacatgctgactgcc
gtcatgcatgaggtgcctgtgaccgcattggctgtccactgccatgatacctatggtcag
gctctggccaacaccttggtggccctgcagatgggcgtgagtgttgtggactcctctgtg
gcgggacttggaggctgtccctatgcaaagggggcatcagggaacctggctacggaggac
ctggtctacatgctgactggcttagggattcacacgggtgtgaaccttcagaagctcctc
gaagccggggacttcatctgtcaagccctgaacagaaaaaccagttccaaagtggcacag
gccacctgcaaactctga
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