Arvicanthis niloticus (African grass rat): 117709635
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Entry
117709635 CDS
T08817
Symbol
Smc3
Name
(RefSeq) structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04110
Cell cycle
anu04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
117709635 (Smc3)
04114 Oocyte meiosis
117709635 (Smc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
anu03036
]
117709635 (Smc3)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
anu00535
]
117709635 (Smc3)
Chromosome and associated proteins [BR:
anu03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
117709635 (Smc3)
Meiosis-specific proteins
Cohesin complex and associated proteins
117709635 (Smc3)
Proteoglycans [BR:
anu00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
117709635 (Smc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_23
AAA_29
OmpH
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
117709635
NCBI-ProteinID:
XP_034360018
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All DBs
Position
1:159653350..159692368
Genome browser
AA seq
1217 aa
AA seq
DB search
MYIKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQ
RLALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKND
VMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKEESISLMK
ETEGKREKINELLKYIEERLHTLEEEKEELAQYQKWDKMRRALEYTIYNQELNETRAKLD
ELSAKRETSGEKSRQLRDAQQDARDKMEDIERQVRELKTKISAMKEEKEQLSAERQEQIK
QRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELAETEPKFNSVKEKEER
GIARLAQATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQIAAIHKDL
EDTEANKEKNLEQYNKLDQDLNEVKARVEELDRKYYEVKNKKDELQSERNYLWREENAEQ
QALAAKREDLEKKQQLLRAATGKAILNGIDSINKVLEHFRRKGINQHVQNGYHGIVMNNF
ECEPAFYTCVEVTAGNRLFYHIVDSDEVSTKILMEFNKMNLPGEVTFLPLNKLDVRDTAY
PETNDAIPMISKLRYNPRFDKAFKHVFGKTLICRSMEVSTQLARAFTMDCITLEGDQVSH
RGALTGGYYDTRKSRLELQKDVRKAEEELGELEAKLNENLRRNIERINNEIDQLMNQMQQ
IETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMESTRESLKAE
LGTDLLSQLSLEDQKRVDALNDEIRQLQQENRQLLNERIKLEGIITRVETYLNENLRKRL
DQVEQELNELRETEGGTVLTATTSELEAINKRVKDTMARSEDLDNSIDKTEAGIKELQKS
MERWKNMEKEHMDAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTL
SLKQLFRKLEQCNTELKKYSHVNKKALDQFVNFSEQKEKLIKRQEELDRGYKSIMELMNV
LELRKYEAIQLTFKQVSKNFSEVFQKLVPGGKATLVMKKGDVEGSQSQDEGEGSGESERG
SGSQSSVPSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFY
LFDEIDQALDAQHRKAVSDMIMELAVHAQFITTTFRPELLESADKFYGVKFRNKVSHIDV
ITAEMAKDFVEDDTTHG
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtacatcaagcaggtgattatccagggcttccgaagttaccgagatcaaacaattgta
gatcccttcagttcgaaacataacgttattgtgggcagaaatggatctggaaaaagcaac
tttttttatgcaatccagtttgttctcagcgatgaatttagtcatcttcgtccagagcag
cgattggccttgttgcacgagggtacaggtcctcgtgttatttctgcttttgtggaaatc
atttttgacaattcagacaacagattaccaattgataaagaagaagtttcacttcgaaga
gttattggtgccaagaaagatcagtatttcctagataagaagatggtcacgaaaaatgat
gtgatgaatctccttgaaagtgctgggttttcaagaagtaatccttattacattgttaag
caaggaaagatcaaccaaatggcaacagcaccagattctcagagattaaaactactgaga
gaagtagctggtactagagtgtatgacgagcgtaaagaggaaagcatctccctgatgaaa
gagacagagggcaaacgggagaagatcaatgaattattaaaatacattgaagagcgatta
catactctagaggaggaaaaggaggaactggcccagtatcagaagtgggataaaatgagg
cgtgccctggagtacaccatctacaaccaggagctcaacgagactcgtgctaagcttgat
gagctttctgctaagcgagaaacaagtggagagaaatccagacaattgagagatgcccaa
caggatgcaagagataaaatggaggatattgagcgccaggttagagaactgaaaacaaaa
atttcagctatgaaagaagaaaaagaacagcttagtgctgaaagacaagagcagattaag
caaaggaccaagttggaacttaaagccaaggatttacaagatgagctggcaggcaatagt
gaacagcggaaacgtttattaaaagagaggcagaagctgcttgaaaaaatagaagaaaag
cagaaagaactggcagaaacagaacctaaattcaacagcgtaaaagaaaaagaagagcga
ggaattgctagattggctcaagctacacaggaaagaactgatctttatgcaaagcagggt
cgaggaagccagtttacatcaaaggaagaaagggacaagtggattaagaaggagctgaag
tctctagaccaggccatcaatgataagaaaagacagattgctgctatacacaaggatctg
gaggacaccgaggcaaataaagaaaaaaatctagagcaatataataaactggatcaggat
ctcaatgaagtcaaagctcgagttgaagaactggacagaaaatattatgaagtaaaaaat
aagaaagatgaactacaaagtgaaagaaattacttgtggagagaggagaatgcagaacaa
caagcacttgctgctaaaagagaagaccttgagaagaagcagcaacttcttagagcagca
acaggaaaggccatcttaaatggaatagatagcattaacaaagtgctagaacattttcgg
cgaaaaggtataaaccaacatgttcagaatggctaccatggcattgtaatgaataacttt
gagtgcgaaccagctttctatacttgtgtggaagtcactgctggtaacaggttattttat
cacattgttgattcagatgaagtcagcacaaagattttaatggagttcaataaaatgaat
cttcctggagaggtgactttcctgcctcttaacaagttagatgtgagggatactgcctat
ccggaaactaacgatgctatccctatgatcagtaagctgaggtacaatcccagatttgac
aaagctttcaaacatgtgtttggaaagacactcatctgtcggagcatggaggtttcaact
cagctggctcgtgccttcactatggactgtattactttggaaggtgatcaagtcagtcat
cgaggtgctctgactggaggctattacgacacaagaaagtctcgacttgagttgcagaaa
gacgttagaaaagcagaagaggagctgggtgagcttgaagcaaagctcaatgaaaaccta
cgcagaaacattgaaaggattaataatgaaattgatcaattgatgaaccaaatgcagcag
atagagacccaacaaagaaaatttaaagcatccagagatagcatattatctgagatgaag
atgctaaaagagaagagacagcaatcagaaaagactttcatgccaaagcaacgtagctta
caaagcttggaggcgagtctgcatgctatggagtctaccagagaatcactgaaagcagaa
ctgggaacagatttgctttctcaactcagtctagaagatcagaaaagagtcgatgcactg
aacgatgaaatccgtcaacttcagcaggaaaacagacagctgctaaatgagagaattaaa
ctagaaggtattataactcgagtagagacctacctgaatgagaacctgaggaaacgcttg
gaccaagtagaacaggaacttaatgaactgagagagacagaaggtggtactgttcttact
gctacaacatcagaacttgaagctattaataaaagagtaaaagatactatggcaagatca
gaagatttggataattccattgacaaaacagaagctggaattaaagagctccagaaaagt
atggagcgctggaaaaacatggagaaagaacacatggacgccataaaccatgacactaaa
gaactggagaagatgaccaaccgacaaggcatgctgttgaagaagaaagaagagtgtatg
aagaaaatccgagagctgggatcccttccgcaggaagcatttgaaaaataccagacactg
agtcttaagcagttgtttcggaaacttgagcagtgcaatacagagttaaagaagtacagc
cacgtgaacaagaaggcgttagatcagtttgtgaacttctctgagcagaaagaaaagctg
ataaagagacaagaggaattggataggggctacaaatcaatcatggaattgatgaatgta
cttgaacttcgaaaatatgaagctattcagttaactttcaagcaggtatctaagaacttc
agtgaagttttccagaagttagtccctggtggcaaagccactctggtgatgaagaaaggc
gatgtggagggcagccagtctcaggatgaaggagagggcagcggcgagagcgagaggggc
tctgggtcacagagcagtgtgccatcagttgaccagttcacaggagtcgggatcagggtg
tcatttacagggaagcaaggggagatgagagaaatgcagcagctttcaggaggacagaag
tctctggtagcccttgctctcatttttgccattcagaaatgtgaccctgctcccttttac
ctgtttgatgagatcgaccaggctttggatgctcagcacagaaaagccgtgtcagacatg
attatggagctagctgtgcacgcccagtttatcactacgacttttaggcctgaactgctt
gagtcagctgacaaattctatggtgtaaagttcagaaataaggttagtcacattgatgtg
atcacagcagagatggccaaagattttgtagaagatgataccacacatggttaa
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integrated database retrieval system
