Arvicanthis niloticus (African grass rat): 117709806
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Entry
117709806 CDS
T08817
Symbol
Sox15
Name
(RefSeq) protein SOX-15
KO
K09271
transcription factor SOX15/30
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
anu03000
]
117709806 (Sox15)
Transcription factors [BR:
anu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
117709806 (Sox15)
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
117709806
NCBI-ProteinID:
XP_034360077
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Position
6:complement(52128522..52130232)
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AA seq
231 aa
AA seq
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MALPGSSQAETWSLDSPSSTASLPLGPQEQEVGGGPGAPGGLPLEKVKRPMNAFMVWSSV
QRRQMAQQNPKMHNSEISKRLGAQWKLLGDEEKRPFVEEAKRLRARHLRDYPDYKYRPRR
KSKNSGTGSVPFSQGGGGLACGGPHWGPGYTTTQGSRGFGYQPPNYSTAYLPGSYTSSHC
RPEAPSPSTFPQSDPRLQGELIPSFSPYPSPDSATPYNTSLAGAPMPVTHL
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgcccggctcctctcaagcagagacctggagcctggattctccgtcttccaca
gcctctttgcccttaggacctcaggagcaggaggtcggcgggggccctggagcgcctggg
gggcttccgctggagaaggtgaagaggcccatgaacgccttcatggtgtggagctctgtt
cagcgccgccagatggcgcagcagaaccccaagatgcacaactctgagatctccaagcgc
ttgggcgctcagtggaagctgctgggcgatgaagagaagcgacccttcgtggaggaagcc
aagcgtcttcgtgcccgccacctccgcgactatcccgactacaagtaccgaccccggcgt
aagagcaaaaactcaggcaccgggtctgtccccttcagccaaggaggaggtggcctggca
tgtggcggcccacactgggggccagggtacacaacaacccaagggagcagagggtttggg
taccagccccccaactattcaacagcttacctgcctggcagttacacctcctcccattgc
agaccggaggccccctcaccgagcaccttccctcagagtgatcctaggctccagggggag
ctaataccctctttctccccctacccatccccagactctgccactccatataatacttcc
cttgctggtgcccccatgccagtaacccacctttaa
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