Arvicanthis niloticus (African grass rat): 117709947
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Entry
117709947 CDS
T08817
Symbol
Itga2b
Name
(RefSeq) integrin alpha-IIb
KO
K06476
integrin alpha 2B
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04015
Rap1 signaling pathway
anu04151
PI3K-Akt signaling pathway
anu04510
Focal adhesion
anu04512
ECM-receptor interaction
anu04611
Platelet activation
anu04613
Neutrophil extracellular trap formation
anu04640
Hematopoietic cell lineage
anu04810
Regulation of actin cytoskeleton
anu04820
Cytoskeleton in muscle cells
anu05165
Human papillomavirus infection
anu05200
Pathways in cancer
anu05222
Small cell lung cancer
anu05410
Hypertrophic cardiomyopathy
anu05412
Arrhythmogenic right ventricular cardiomyopathy
anu05414
Dilated cardiomyopathy
anu05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04015 Rap1 signaling pathway
117709947 (Itga2b)
04151 PI3K-Akt signaling pathway
117709947 (Itga2b)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117709947 (Itga2b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117709947 (Itga2b)
09142 Cell motility
04820 Cytoskeleton in muscle cells
117709947 (Itga2b)
04810 Regulation of actin cytoskeleton
117709947 (Itga2b)
09150 Organismal Systems
09151 Immune system
04640 Hematopoietic cell lineage
117709947 (Itga2b)
04611 Platelet activation
117709947 (Itga2b)
04613 Neutrophil extracellular trap formation
117709947 (Itga2b)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
117709947 (Itga2b)
09162 Cancer: specific types
05222 Small cell lung cancer
117709947 (Itga2b)
09172 Infectious disease: viral
05165 Human papillomavirus infection
117709947 (Itga2b)
09166 Cardiovascular disease
05418 Fluid shear stress and atherosclerosis
117709947 (Itga2b)
05410 Hypertrophic cardiomyopathy
117709947 (Itga2b)
05412 Arrhythmogenic right ventricular cardiomyopathy
117709947 (Itga2b)
05414 Dilated cardiomyopathy
117709947 (Itga2b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
anu01009
]
117709947 (Itga2b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
anu04147
]
117709947 (Itga2b)
04515 Cell adhesion molecules [BR:
anu04515
]
117709947 (Itga2b)
04090 CD molecules [BR:
anu04090
]
117709947 (Itga2b)
Protein phosphatases and associated proteins [BR:
anu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117709947 (Itga2b)
Exosome [BR:
anu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117709947 (Itga2b)
Cell adhesion molecules [BR:
anu04515
]
Integrins
Integrin alpha subunits
117709947 (Itga2b)
CD molecules [BR:
anu04090
]
Proteins
117709947 (Itga2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
117709947
NCBI-ProteinID:
XP_034360285
LinkDB
All DBs
Position
6:19946854..19962834
Genome browser
AA seq
1035 aa
AA seq
DB search
MARASCTWHTLWLLQWTPLFLGPGVAPPAWALNLDSVKFSIYAGPNGSHFGFAVDFHKNN
HGSVSIVVGAPRALNASQEETGGVFLCPWKASGGTCNPLLFDLRDETRNSSFQTYYTFKT
GQGLGASVISWNDVIVACAPWQHWNVLEKFDEAEKTPVGGCFLAQVQSGARAEYSPCRDN
TMNSVYEKGFRTDKRHCEAGFSLAVTQAGELVLGAPGGYFFVGLLARVPIETIISRYRPG
TLLWHVPNQRFTHDYGSEVYSHGYRGYSVAVGEFDGDPHTTEYILGAPTWSWTLGAVEIL
DSYYQPLHRLHGEQLASYFGHSVAVTDVNGDGRHDLLVGAPLYMESRTDLKLAEVGRVYL
FLQPKGPQALSTPTLLLTGTQLYGRFGSAIAPLGDLNRDGYNDVAVAAPYGGPSDQGQVL
IYLGQSEGLSPRPSQVLDSPFPTGSGFGFSLRGAVDIDDNGYPDLVVGAYGASKVAVYRA
QPVVMATAILMVQDFLNPTLKNCVLEPTKTPVSCFDIQMCVGVTGHNIPQKLNLKAELQL
DLQKPLQGRRVLLLASQQASLTLSLDLGEKTRPICHTTRAFLRDEADFRDKLSPIVLSFN
VSLPPEETGKAPAVVLHGDTHVQEQTRIILDCGEDDLCVPELRLTATAGDSPLLIGADNV
LELKIEAANDGEGAYEAELAVHLPPGAHYMRALSNIEGFERLVCAQKKENESRVALCELG
NPMKKDTQIGITMLVSVENLEEAGESVSFQLQIRSKNSQNPNSEALLLSVAVQAEATVEL
RGNSFPASLVVAAEEGDREQNGLDSWVSRVEHTYELHNNGPGTVNGLRLVIHLPGQSRPS
DLLYILDVEPQGGLLCSTQPAPKLLKVDQRLPTPSPSFIPLVHHERDRRQASLQGPKPPG
QQDPVLVTCDGSAPCTVVECELREMVRGQRAMVTVQAMLGLPSLRQRPQEQFVLQSHAWF
NVSSLPYSVPVISLPSGQALVQTQLLRALEKAVPVWWVLVGVLGGLLLLTLLVFAMWKAG
FFKRNRPPLEEEDEE
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atggccagagcttcatgcacatggcatactctgtggcttctacagtggacaccactgttc
ttgggacctggtgttgctcctccagcctgggccttgaacctggactctgtgaagttctcc
atctatgcagggcccaatggcagccactttggctttgcagtagactttcataagaacaac
catgggagcgtgtccatcgtggtgggcgcccccagggccctaaacgcaagtcaagaggag
actggaggcgtgttcctgtgcccctggaaggccagtggcggcacgtgcaacccgttgctc
ttcgacctcagggatgagacacgaaactcgagcttccaaacttattataccttcaagacc
gggcaaggacttggggcatcagtcatcagctggaatgacgtcattgtggcctgtgccccc
tggcagcactggaatgttctagaaaagttcgatgaggcagagaagactccggtaggaggc
tgcttcctggctcaggtccaaagcggggctcgcgcagagtactcgccctgtcgcgacaac
accatgaactccgtttacgaaaagggttttagaactgacaagcgacactgtgaagcaggc
ttcagcttggcggtgacccaggctggggagctagtgcttggagcccctggaggctacttt
tttgtaggtctcctggctcgcgttccaattgagactatcatctcgaggtaccgcccgggt
acccttttgtggcatgttcccaaccagcgcttcacccatgactacggcagcgaagtgtat
tcccacggttaccggggatattcggtagctgtgggcgagttcgatggggatccgcacact
acagaatatatacttggtgcccccacttggagctggaccttaggagcggtggaaattttg
gactcctactaccagcccctgcaccggctgcatggagagcagctggcttcatatttcggg
cactcggtggcagtcactgacgtcaatggggacgggcggcatgatctactggtgggggct
ccactgtacatggagagcaggacagacctcaagctggccgaggtgggccgagtatatttg
tttctgcagcctaagggcccccaagctctgagcacacccactctcctgctgactggcact
cagctctatgggagatttggatctgccattgcacccctgggtgacctcaaccgagacggc
tataatgatgttgctgtggctgccccctacgggggtcccagtgatcagggccaagtgctg
atatacctgggtcagagtgaagggctgagtccccgcccctcccaggtcctggacagcccc
ttccccacaggctctggctttggcttctcccttcgtggcgctgtggacatcgacgacaac
ggatacccagacctggttgtgggcgcatatggggctagcaaggtggctgtgtacagagct
cagcctgtggtgatggccactgccatcctgatggttcaagacttcctgaatcccacactg
aagaactgtgtcctggaaccgacaaaaacaccagtcagctgctttgacatccagatgtgt
gtgggagtcacaggacataacattcctcagaagctgaatctaaaggcagagctgcagctg
gacctacagaagccccttcagggccgccgggtgctcctgctggcctctcaacaggctagc
ctcaccctgagcctggacctgggtgaaaaaaccagacctatctgccacaccaccagggcc
ttccttcgagatgaggccgacttccgggacaagctgagcccaattgtgctaagcttcaac
gtgtcgctgcccccggaagagactggaaaagccccggctgtggtgttgcatggagatacc
catgtccaggagcagactcgaatcatcctggactgtggggaagacgacctgtgtgtgcct
gagctccggctcacagctacagcgggggactccccactgctaattggtgctgacaacgtg
ttggagctgaagattgaagcagccaatgacggcgagggggcctatgaggcggagctggct
gtgcacctgcctccaggtgcccactacatgcgggctctcagcaacattgagggctttgag
aggcttgtctgtgctcagaagaaggagaatgagtccagggtagcactctgtgagctgggt
aaccccatgaaaaaggacacccagataggaattacgatgttggtgagcgttgagaacctg
gaagaagctggagagtctgtgtccttccagttgcagatcagaagcaagaacagccagaat
ccaaacagtgaggctctgctgttgtctgtggcagtccaagctgaagccacagtggagctt
cgggggaactccttccctgcctccctggtggtggcagcagaagaaggtgacagggagcag
aatggcttggacagctgggtctccagggtggaacacacctatgagctccacaacaatggc
cctggcactgtgaatggcctcagactcgtcatccaccttcctggccagtcccggccctcg
gacctactctacatcctggatgtggagccgcaggggggtctcctatgctccacacagccg
gcccccaagcttctcaaggtggaccagaggctacccactcccagcccttctttcattccc
ctggtccatcatgagcgtgatcgcagacaggcatccctgcagggacccaagcctccggga
cagcaggacccagttctggtgacctgcgacggctcagcgccctgtaccgtggtggagtgt
gagctgcgggagatggtgcgcgggcagcgggccatggtcacagtacaagcaatgctgggg
ctacccagcctccgccagaggccgcaagagcagtttgtgctgcagtcgcacgcctggttc
aacgtctcctccctaccttactcggtgccggtgatcagcttgcccagcgggcaagctctg
gtgcagacacagctgcttcgggccttggagaaggccgttcctgtctggtgggtgctggtg
ggcgtgctgggcggtctgctgctgctgaccctgctagttttcgccatgtggaaggctggc
ttcttcaagcggaaccgaccacctctggaggaagaggatgaggaataa
DBGET
integrated database retrieval system
