Arvicanthis niloticus (African grass rat): 117709958
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Entry
117709958 CDS
T08817
Symbol
Scarf1
Name
(RefSeq) scavenger receptor class F member 1
KO
K24318
scavenger receptor class F member 1
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
117709958 (Scarf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
anu04131
]
117709958 (Scarf1)
Membrane trafficking [BR:
anu04131
]
Endocytosis
Phagocytosis
Scavenger receptors
117709958 (Scarf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
EGF_TEN
EGF_2
EGF_Teneurin
EGF_C8A_B_C6
EGF_PEAR1L
Motif
Other DBs
NCBI-GeneID:
117709958
NCBI-ProteinID:
XP_034360298
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All DBs
Position
6:complement(46275243..46287558)
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AA seq
826 aa
AA seq
DB search
MLAAMGRGLVFSLLLLWTRETQGSTLDPTGQHVCVGSSPSELQCCPGWRQKNQECTIPIC
EGPDACRKDEVCVKPGLCRCKPGFFGAQCSSRCPGQYWGHDCRETCPCHPRGQCEPATGV
CQCLPNYWGKLCEFPCTCGSHGHCDPKTGLCHCDPGWWTPTCRRPCQCNPAARCDQATGA
CICPTGLWGHRCSFNCKCNTSPCMQDSGRCICQQGWWGPECSRKCQCVRGQCSVTSGHCS
CPPGFHGVRCELPCSPGHYGAQCKESCGHCELNATCSSVTGNCESCKPGWNGTQCKQPCP
PGTFGERCTGQCPRCWLGEPCQAETGHCQRCDPGWLGHRCENPCPLGTFGKGCSSICPAC
VQGTCDAVTGECICSAGYWGTSCNSSCPSGFHGNNCSIPCQCPEGLCHPVSGACQLGRHG
KNALIVGILVPLLLLLMGIICCAYCCSATRLDPKDRPERNGAAFFRMKQQMWGALTSLGS
TLPCGSLSNYKLPWVTVSHHDPEVPFNHSFIEPPSAGWASDDSFSSDPDSGEEDEAHAYF
MPPREEMVPMSQEKSPAASLPGGPFPPPEDASTPFPIPRTSSLARAKRPSVSFAEGTKFA
PQNSRSSGDLSSPIRKPKRLSRGAQPRPEGQEAEESTGPEQANTEEDAPTATSSGDADIS
HGQLPPDSLTVAECVETTDGGIQESSGSVATIYMLAGTPQKPEGPVWSVFRRLGNYQKDQ
AAPKVKSAIPKPLRRSLGRNQASSGLSQSSGSAPGAVLSGAMESTAVRPEEASRGLGDGV
ESLGTVQEPVTGSSSPEQGSQKQAEEKEQEEPLYENVAPMSVPPQH
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atgctggccgccatgggacgagggctggtgttttcactcttgctgctctggactcgggag
acccagggatccacactagaccctactggtcagcacgtctgtgtaggcagcagcccctct
gagctccagtgctgtcctggctggaggcagaaaaatcaagaatgcaccatccccatctgt
gaggggcctgatgcctgcaggaaggatgaggtgtgcgtgaagccgggcctctgtcgatgt
aaacctggattcttcggagcccagtgcagctcccgctgtccaggccagtactggggccac
gactgtcgtgagacctgcccctgccatccacgtgggcagtgtgaaccagccactggtgtg
tgtcagtgcctgcctaactactggggcaagctctgtgagttcccctgcacctgtggctcc
cacggacactgtgacccaaagacgggcttgtgccactgcgaccccggctggtggacaccc
acgtgtcgtcgcccatgtcaatgcaacccagctgcacgctgcgaccaggccactggagcc
tgcatatgcccgacgggcttgtggggccaccgctgcagcttcaattgcaagtgcaacacc
tcgccctgcatgcaggactctggccgctgcatctgccagcagggctggtggggtccggag
tgtagtcgtaagtgccagtgtgtacgaggccaatgcagcgttacttctggccactgctcc
tgccctcctggattccatggagtccgctgtgagctgccttgcagccctggccactatggg
gcacagtgcaaagaaagctgtggccactgtgagctgaatgccacgtgctcttcagtcaca
ggcaactgtgagtcctgcaagccgggctggaacgggactcagtgcaagcagccatgtcct
ccaggcacatttggtgagaggtgcactgggcagtgcccccgctgctggcttggagagccc
tgtcaagcggaaactgggcactgccagcgctgcgaccctggttggctagggcacaggtgt
gagaacccttgtccccttggtacctttgggaaaggctgcagctctatctgccccgcctgt
gttcaggggacttgtgatgcggtgactggagaatgtatctgcagtgctggctactggggg
accagctgcaatagttcctgtccatctggcttccacggaaacaactgctctatcccctgc
cagtgcccagaggggctctgccaccctgtgtctggggcctgccagctgggccgtcatggt
aaaaacgccctcattgtgggcatcctggtacctctgctgctcctcctcatgggcatcatc
tgctgtgcctactgctgctcagctacccgactggaccccaaggacaggcctgagagaaac
ggagctgcctttttcagaatgaaacagcagatgtggggggccctcaccagcctgggctcg
acactgccctgtggctccctgagtaactacaagctaccctgggtgacagtttctcatcac
gatccggaggttcccttcaaccacagcttcatcgagccgccctctgctggctgggcctct
gacgactccttctcttctgatcctgactctggagaagaggacgaagctcatgcctacttc
atgccacctcgagaagagatggtccctatgtcccaagaaaaatcaccagcggccagcctt
cctggaggccccttccctccccctgaggacgcctccacaccattccccatcccacgcacg
tccagcctggctcgggccaagaggccatctgtctcctttgctgaaggcactaagtttgca
ccacagaatagccgaagctctggggatctctccagccccatacgaaaacccaagagactc
tccagaggtgctcagccacgtcctgaagggcaggaggctgaggagtctacaggcccagag
caagcaaacacagaggaggatgctcctacagccacaagctctggagatgctgacattagt
cacggacaacttccacctgatagcctgacagtggcagagtgtgtggagaccactgatgga
ggcatccaggagagttcggggtctgtggccactatctatatgctggcagggacaccccag
aaacctgagggccctgtctggtctgtctttcgtcgtttgggaaactaccagaaagatcag
gcagcacccaaggtaaagagtgccatccctaagcctttgcgccgatctctgggtcgaaac
caggccagctctgggctgtctcagagctctggctcagctccaggtgccgtgctctccggg
gccatggagtccacagcagttaggccagaggaagcatcgagaggtctgggagatggcgtt
gaaagcttagggacagtccaggagccagtcaccggaagcagttccccggaacagggttcc
cagaagcaggcagaagagaaggagcaggaggagcccctgtatgagaatgttgcgcccatg
tctgtgccgccacagcactga
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