Arvicanthis niloticus (African grass rat): 117710001
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Entry
117710001 CDS
T08817
Symbol
Rnf43
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
117710001 (Rnf43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
anu04121
]
117710001 (Rnf43)
Enzymes [BR:
anu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117710001 (Rnf43)
Ubiquitin system [BR:
anu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117710001 (Rnf43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
117710001
NCBI-ProteinID:
XP_034360374
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All DBs
Position
6:complement(34425124..34494847)
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AA seq
778 aa
AA seq
DB search
MSGGHQLQLAVLWPWLLMTTLHAGFGHTGLVLAAAVESERSEQKAIIRVIPLKMDPTGKL
NLTLEGVFAGVAEVTPAEGKLMQSHPLYLCNASDDDNLEPGFISIVKLESPRRAPRPCLS
LASKARMAGERGANAVLFDITEDRSAAEQLQQPLGLTKPVVLIWGNDAEKLMEFVYKNRK
AYVWIELKEPPAWANYDAWILLTVVGTIFVIILASVLRIRCRPHHSRPDPLQQRTAQAIS
QLATRRYHASCRRARAEWPDSGSSCSSAPVCAICLEEFSEGQELRVISCLHEFHRTCVDP
WLHQHRTCPLCMFNIVEGDSFSQALGASPSYQEPGRRLHLIRQHPGHAHYHLPSAYLLGP
SRNSVARTPRPRPFLPSQEPSMGSRHQRLPRASHLRVPEEQQHLAVPVHRSAQGWGLNRL
RCTSQHPTACPAALRRARPHDSSGSGESYCTERSGYLADGPASDSSSGPCHGSSSDSVVN
CTDISLQGIHGSSSTFRSSLSSDFDPLVYCSPEGDPQGKGPSVTSRPRSLDSVVPTGETQ
VSSHIHYHRHRHHHYKKQLQWRGRKPGPETGVPLSRSAASHTQLDPSQLTAPNPTASSTL
PNPQRPRALTEPAPGLAEAAGPSPCPSPNPCSLFNLQKSSLTVRHSQRKRRGGPSEPLPT
SLPQDLTVHTACPTVSPHYSPSLAYPWPPEVPPLMFRPPGLDRRLLHEVPGPCYSSSQPV
WLYLNPCQPLGPCLPGEGHSKWTFDNPEDRRCPYSHYQVLPAQPGSEEELEELCEQAV
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtggccaccagctgcagctggctgtcctctggccctggctgctgatgacgacc
ctgcacgcaggctttggacacacaggactggtgctggcagcagcagtggagtctgaaaga
tcagaacagaaagctattatcagagtgatccccttgaaaatggaccccacaggaaagctg
aacctcactttggaaggtgtgtttgctggtgttgcggaggtgactccagcagaagggaag
ctaatgcagtcccaccccctgtacctgtgcaacgccagtgacgatgacaacctagaacct
ggattcatcagcatcgtcaagctggagagtccccgacgagctcctcgcccctgcctgtca
ctggccagtaaggccagaatggctggcgagcgaggagccaacgcagttctctttgacatc
acagaggatcgatcagctgctgagcagctgcagcagcccctagggctgactaaacccgtg
gtgctgatctggggtaatgatgccgagaagctgatggagtttgtgtacaagaatcggaag
gcctatgtgtggattgagctgaaggagcccccagcttgggcaaattatgatgcgtggatc
ctcctgactgtggtgggtaccatcttcgtgatcatcctggcttccgtgctgcgcatcagg
tgccgcccccaccatagcagaccggatcctcttcagcagcggacagcccaggccatcagc
cagctggccaccaggaggtaccacgccagctgtagacgggctcgagccgagtggccagac
tcagggagtagctgcagctcggcccccgtgtgtgccatctgtctggaagagttctcagag
gggcaggagctccgggtcatttcctgcctccacgagtttcatcgaacctgtgtggacccc
tggctacaccagcatcgaacttgccccctctgcatgttcaacatcgtagagggagattca
ttttctcaggctctgggagcctctccatcttaccaggaaccaggcagaagactccacctc
attcgccagcatcctggccatgcccactatcatctcccttctgcctacctgttgggccct
tctaggaattcggttgcccggactccaagacctagaccctttctgccctcccaggagcca
agtatggggtctcggcatcagcgccttcccagggcttcacatctccgggtaccagaagaa
cagcagcacttggcagtacctgtgcaccggtctgcacagggctgggggctgaatcgcctc
cgatgtacctctcagcatcccacagcttgcccagcggccctacgacgagccaggcctcat
gacagcagtgggtctggagaaagctactgtacagaacgaagtggttacttggcagatggg
ccagccagtgactccagctcagggccctgtcacggctcttccagtgactcagtggtcaac
tgcacggatatcagcctgcagggcatccatggcagcagttctaccttccgaagttccctg
agcagtgactttgaccccttggtatactgtagccctgaaggggatccccaagggaaagga
cctagtgtgacctctcgaccccgctcgctggactcagtggtacctacgggggagacccag
gtttccagccacatacactatcaccgtcaccgccaccaccactacaaaaagcaattgcag
tggcgtggcaggaagcctggcccagaaactggggtcccactgtccaggtctgctgcttct
cacactcagctggatccatctcagctcacggcacccaaccccacagcttcttcaacgctc
cccaacccacaacggcccagggcccttacagagccagcccctggcctagcagaagctgcc
ggccctagcccctgtcccagccccaacccctgcagcctttttaacttgcagaaatccagc
ctcactgtcagacactcacagagaaaacggcggggtggcccctcagaacccctgccaacc
tctctgccccaggacttgactgtgcacacagcttgccctacagtttccccccactacagc
cccagtctagcatacccttggcccccagaggttcctccattgatgttcagacctccaggc
ctggataggaggctgctacatgaagtcccaggcccctgttactcaagttcacagccagtg
tggttgtatctgaatccctgccagcctctgggaccatgcttacctggagagggacattcc
aagtggacttttgacaacccagaggacaggagatgtccttactcacactatcaggtgctg
ccagcccagcctggctcagaggaggagcttgaggagctgtgtgaacaagctgtgtga
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