Arvicanthis niloticus (African grass rat): 117710016
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Entry
117710016 CDS
T08817
Symbol
Tubd1
Name
(RefSeq) tubulin delta chain isoform X1
KO
K10390
tubulin delta
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
117710016 (Tubd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
anu03036
]
117710016 (Tubd1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
anu04812
]
117710016 (Tubd1)
Chromosome and associated proteins [BR:
anu03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
117710016 (Tubd1)
Cytoskeleton proteins [BR:
anu04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
117710016 (Tubd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_2
Motif
Other DBs
NCBI-GeneID:
117710016
NCBI-ProteinID:
XP_034360394
LinkDB
All DBs
Position
6:complement(35567628..35587687)
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AA seq
453 aa
AA seq
DB search
MSIVTVQLGQCGNQIGFEVFDALFRDSHCSQGLCSKRENEAYQASCKERFFREEENGVPV
ARAVLVDMEPKVINQTLSKAAQSGRWKYGQHTSFCQKQGSGNNWAYGYSVHGPKHEESIM
NLIQTEVEKCDSLSGFFIIMSMAGGTGSGLGAFITQKLQNQYSSSLKMNQIIWPYGTGEV
IVQNYNSILTLSHLYRSSDALLIHENDAIHKICAKRMNIKQISFRDLNQVLAHQLGSVLQ
PAYSEGSSSHYRRNLLGDLMEHLVPHPEFKMLGVRNIPQMSAESLAYSTFTWAGLLKHLR
QMLISSAKMEEGIDWQVRPPLSGLPPIGKVSAHKEPQFNTSLANLVILRGREVHSADVEG
FKDPALYASWLEPVDAFSVWKTQRAFDKYEKSAALVSNSQLLVKPLNMIVGKAWNMFSSK
AYIHQYTKFGMEEEDFLDSFTLLEQVVASYGSL
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatagtgacagtacagctggggcaatgtggcaaccagattggctttgaggtgttt
gatgctttatttagagactcgcactgttcccagggactctgttctaagagagaaaacgag
gcatatcaagcatcctgcaaagaaagatttttcagggaggaagaaaatggagttccagtg
gcccgggctgttcttgttgacatggaacctaaagttattaatcaaacactatcaaaagct
gcccagtctggccgatggaaatacggtcagcacacaagcttttgtcagaaacaaggatct
gggaacaactgggcatatggttactctgtgcatggaccgaagcatgaagaatctataatg
aacttaatccaaacagaggtggagaaatgtgactctttgagtggatttttcatcataatg
agtatggccgggggaacaggatcagggctgggagccttcatcacccagaagctacaaaat
cagtactccagttccttgaaaatgaaccagattatatggccttatggaacgggtgaggtt
attgtgcagaactacaactccatcttgactctctctcacttgtaccggtcttcagatgcc
cttcttatccacgagaatgacgctatccataagatctgtgccaaacggatgaacatcaag
cagatctccttcagagatttaaatcaagttcttgctcatcagctgggcagtgtgctccag
cctgcatactctgagggcagctcatctcactaccgcagaaatctactaggagacttaatg
gagcatttagttccccaccccgagtttaagatgctgggtgtccgtaacattcctcagatg
tctgcggagtccctggcatacagcacgtttacctgggctggcctcctcaagcatttaaga
cagatgcttatttccagtgcaaaaatggaagaaggtatcgactggcaggtgcggcctcct
ctgtcaggcctcccacctattggcaaagtgtctgcccacaaggaaccccagtttaacact
tctcttgctaacttggtcatcctccgagggagagaggtgcacagtgcggacgtggaggga
tttaaagacccagctctctacgcttcctggttggagcctgttgatgctttcagcgtgtgg
aaaacccagcgagcctttgacaagtatgagaagtctgcagccctggtcagcaatagccag
ctcttagtaaagccactgaatatgattgtgggcaaggcgtggaatatgttctcatccaaa
gcctacatccatcagtacacaaaatttggaatggaggaagaagactttttggacagcttt
acattgttggaacaagttgttgccagctatggtagtctttga
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