Arvicanthis niloticus (African grass rat): 117710073
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Entry
117710073 CDS
T08817
Symbol
Hdac5
Name
(RefSeq) histone deacetylase 5 isoform X1
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04371
Apelin signaling pathway
anu04613
Neutrophil extracellular trap formation
anu05034
Alcoholism
anu05203
Viral carcinogenesis
anu05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
117710073 (Hdac5)
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
117710073 (Hdac5)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
117710073 (Hdac5)
05203 Viral carcinogenesis
117710073 (Hdac5)
09165 Substance dependence
05034 Alcoholism
117710073 (Hdac5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
anu03036
]
117710073 (Hdac5)
Enzymes [BR:
anu01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
117710073 (Hdac5)
Chromosome and associated proteins [BR:
anu03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
117710073 (Hdac5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
Motif
Other DBs
NCBI-GeneID:
117710073
NCBI-ProteinID:
XP_034360507
LinkDB
All DBs
Position
6:20180625..20215184
Genome browser
AA seq
1133 aa
AA seq
DB search
MLLVPKAQGLVEMLQTIYETESCFSADGMSGREPPLEILPRTSLHSIPVAVEVKPVLPGA
MPSSMGGGGGGSPSPVELRGALAGPMDPALREQQLQQELLVLKQQQQLQKQLLFAEFQKQ
HDHLTRQHEVQLQKHLKQQQEMLAAKRQQELEQQRQREQQRQEELEKQRLEQQLLILRNK
EKSKESAIASTEVKLRLQEFLLSKSKEPTPGGLNHSLPQHPKCWGAHHASLDQSSPPQSG
PPGTPPSYKLPLLGPYDSRDDFPLRKTASEPNLKVRSRLKQKVAERRSSPLLRRKDGTVI
STFKKRAVEITGTGPGVSSVCNSAPGSGPSSPNSSHSTIAENGFTGSVPNIPTEMLPQHR
ALPLDSSPNQFSLYTSPSLPNISLGLQATVTVTNSHLTASPKLSTQQEAERQALQSLRQG
GTLTGKFLSTSSIPGCLLGVALEGDTSPHGHASLLQHVLLLEQARQQSTLIAVPLHGQSP
LVTGERVATSMRTVGKLPRHRPLSRTQSSPLPQSPQALQQLVMQQQHQQFLEKQKQQQMQ
LGKILTKTGELSRQPTTHPEETEEELTEQQQEALLGEGALTMPREGSTESESTQEDLEEE
EDEEEEEEDCIQVKDEDGESGPDEGPDLEESSADYRKLFADAQQLQPLQVYQAPLSLATV
PHQALGRTQSSPAAPGSMKSPTDQPTVVKHLFTTGVVYDTFMLKHQCMCGNTHVHPEHAG
RIQSIWSRLQETGLLSKCERIRGRKATLDEIQTVHSEYHTLLYGTSPLNRQKLDSKKLLG
PISQKMYAMLPCGGIGVDSDTVWNEMHSSSAVRMAVGCLVELAFKVAAGELKNGFAIIRP
PGHHAEESTAMGFCFFNSVAITAKLLQQKLSVGKVLIVDWDIHHGNGTQQAFYNDPSVLY
ISLHRYDNGNFFPGSGAPEEVGGGPGVGYNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIA
HEFSPDVVLVSAGFDAVEGHLSPLGGYSVTARCFGHLTRQLMTLAGGRVVLALEGGHDLT
AICDASEACVSALLSVELQPLDEAVLQQKPSVNAVATLEKVIEIQSKHWSCVQRFAAGLG
CSLREAQTGEKEEAETVSAMALLSVGAEQAQAAATQEHSPRPAEEPMEQEPAL
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atgctgctggtgcccaaggcacaggggcttgtggagatgctgcagaccatctatgagacc
gagtcctgtttctcagcagatggcatgtcaggccgggaaccacccttggaaatcctgcca
cggacttctctgcacagcatccctgtggcagtggaggtgaagccggtgctgcctggagcc
atgcccagctccatggggggtggaggtggaggtagccccagccccgtggagcttcggggg
gctctggcaggccccatggaccccgctctacgggagcagcagctgcagcaagagctcctg
gtgctgaagcagcagcagcagcttcagaagcagctcctgtttgccgagtttcagaagcag
catgaccacctgacgcggcagcacgaagtccagctgcagaagcacctcaagcagcagcag
gagatgctagcggctaagaggcagcaggagctggagcagcagcggcagcgtgagcagcag
cggcaagaggagctagagaaacagcggctggagcagcagctgctcattctacgcaacaag
gagaagagcaaagagagtgccatcgccagcaccgaggtaaagctgaggctccaggaattc
ctgttgtccaagtcaaaggagcccacgccaggcggcctcaaccattccctcccacagcat
cccaaatgctggggagcccaccatgcttctttggaccagagttcccctccccagagcggc
cctcctgggacgcctccctcctacaaattgcctttgcttgggccctatgacagccgtgat
gactttcccctccgtaaaacggcctcggaacccaacttaaaagtacgttcgaggctaaaa
cagaaggtagcggagaggagaagcagtcccctcctgcgtcgaaaggatggcaccgttatt
agtacttttaagaagagagcagttgagatcacaggcacagggcctggggtgtcgtccgtg
tgtaacagtgcgcccggctctggccccagctctcccaacagttcccacagcaccatcgct
gagaacggctttactggctcagtccccaacatccccactgagatgcttccccagcaccgg
gccctccctctggacagttccccaaatcagttcagcctctacacgtctccttctctgccc
aacatctccctagggctgcaggccactgtcactgttaccaactcacacctcaccgcctcc
ccgaagctgtcgacacagcaggaggctgagaggcaggcccttcagtccctgcggcagggc
ggcacactgaccggcaagttcttgagcacatcgtccatccctggctgcctgctgggagtg
gcattggagggcgacacgagcccccatgggcacgcttccctgctgcagcatgttctgctt
ctggagcaggcccggcaacagagcacactcatagcagtgccactccatgggcagtcccca
ttggtgacgggtgaacgtgtggccaccagcatgaggacggtgggcaagctcccgaggcac
cgacctctgagccgcactcagtcctccccactgccgcagagtccccaggccctgcagcag
ctggtcatgcagcagcagcaccagcagttcctcgagaagcagaagcagcagcagatgcag
ctgggcaagatccttaccaaaactggggagctgtcaaggcagcccaccacccaccccgag
gagacagaagaggagctgacagaacagcagcaggaggccttgctgggggagggggccctg
accatgccccgagaaggctctacagagagtgagagcacccaggaagacctagaagaggag
gaggatgaggaggaagaagaggaggactgcattcaggtcaaggatgaggatggagagagt
ggtcctgatgagggcccggacttagaggagtccagtgctgattacagaaagttgttcgca
gatgcccagcagttacagcccctccaggtgtaccaggcacccctcagcctggccactgtg
cctcatcaggccctgggccgcacccagtcctcacctgctgctcctgggagcatgaagagc
cccacagaccaacccactgtggtgaagcacctcttcaccacaggtgtggtctatgacacg
ttcatgctgaagcatcagtgtatgtgcggaaacacacatgtccacccagagcacgcaggc
cgcatccagagcatctggtcccggctgcaggaaactggtctgctcagcaaatgtgagcgg
atccggggtcgtaaagccactctggatgaaatccagaccgtgcactctgagtaccacacc
ctactctatgggaccagcccccttaaccggcagaagctggacagcaagaagctgcttggc
cccatcagccagaagatgtacgccatgctgccttgtgggggcattggggtggacagtgac
actgtgtggaacgagatgcactcctctagtgccgtgcgaatggcagtgggctgcctggtg
gagctggccttcaaggtggctgcaggagagctcaagaatggatttgctatcattcggccc
ccaggacatcatgctgaggagtccacagccatgggattctgcttcttcaactccgtagcc
atcacagctaaactcctgcagcagaagctgagcgtgggcaaggttctcatcgtggactgg
gacattcaccatggcaatggcacccagcaagcattctacaatgacccctctgtgctctac
atctctctgcatcgctacgacaatggaaacttctttccaggctctggggctcctgaagag
gttggtggagggccaggcgtggggtacaacgtaaatgtggcgtggacaggaggtgtggat
ccccccattggagatgtggaatacctgacagccttcaggacagtggtgatgcccattgcc
catgagttctcaccggacgtcgtcctagtctccgctgggtttgatgctgttgaaggacat
ctgtctccattgggtggctattctgtcaccgccagatgttttggccacttgaccaggcag
ctcatgacactggcagggggccgggtggtgctggccctggagggaggccacgacttgacc
gccatctgtgatgcctctgaggcctgtgtctcggctctgctcagcgtggagctgcagccc
ttggatgaagcagtcttgcagcagaagcccagtgtcaatgcagttgccacactagagaaa
gtcatcgagatccagagcaaacactggagctgtgtacagaggtttgccgctggtctgggc
tgctcgctgcgggaggctcagacaggtgagaaagaggaggccgagactgtgagcgccatg
gccctgctttccgtgggggctgagcaggcccaggctgctgccactcaggagcacagcccc
aggccagcagaggagcccatggagcaggagcctgccctgtga
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