Arvicanthis niloticus (African grass rat): 117710111
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Entry
117710111 CDS
T08817
Symbol
Alyref
Name
(RefSeq) THO complex subunit 4
KO
K12881
THO complex subunit 4
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu03013
Nucleocytoplasmic transport
anu03015
mRNA surveillance pathway
anu03040
Spliceosome
anu05014
Amyotrophic lateral sclerosis
anu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117710111 (Alyref)
09122 Translation
03013 Nucleocytoplasmic transport
117710111 (Alyref)
03015 mRNA surveillance pathway
117710111 (Alyref)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117710111 (Alyref)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
117710111 (Alyref)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
anu03019
]
117710111 (Alyref)
03041 Spliceosome [BR:
anu03041
]
117710111 (Alyref)
Messenger RNA biogenesis [BR:
anu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
117710111 (Alyref)
TREX complex
117710111 (Alyref)
Spliceosome [BR:
anu03041
]
Complex C
Other components
EJC/TREX
117710111 (Alyref)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
117710111 (Alyref)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
117710111
NCBI-ProteinID:
XP_034360607
LinkDB
All DBs
Position
6:1844746..1848686
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AA seq
256 aa
AA seq
DB search
MADKMDMSLDDIIKLNRSQRGGRGGGRGRGRAGSQGGRGGAVQAAARVNRGGGPMRNRPA
IARGAASGGGRNRPAPYSRPKQLPDKWQHDLFDSGFGGGAGVETGGKLLVSNLDFGVSDA
DIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQL
VTSQIDTQRRPAQSINRGGMTRNRGSGGFGGGGTRRGTRGGSRGRGRGTGRNSKQQLSAE
ELDAQLDAYNARMDTS
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atggccgacaaaatggacatgtctttggacgacatcattaagctgaaccggagccagcga
ggaggccgcggcgggggccggggtcggggcagggccggctcccagggaggccgcggcggc
gcagtgcaggcggccgcgcgggtgaatcgaggcggcgggcctatgaggaaccggcccgcc
atcgcccgcggcgccgcaagcggcggcggcaggaaccggccggcaccgtacagcagaccg
aaacaacttcccgacaagtggcagcacgacctattcgacagcggcttcgggggtggagcc
ggcgtggagacgggtgggaagctgctggtgtcaaacctggacttcggagtgtcagacgca
gatattcaggaactctttgccgaatttggaacgttgaaaaaagctgccgtgcactatgat
cgctctggacgaagcttaggcacagcagatgtgcactttgaacggaaagcagacgccctg
aaggctatgaaacagtacaatggtgtccctttggatggccgtcctatgaacatccagctt
gtcacatcacagattgatacacagcgaagacctgcacaaagcataaacagaggtgggatg
acaagaaaccgtggctctgggggttttggcggtggtggcaccaggagaggaacgcgtgga
ggcagccggggaagaggtagaggcaccggcaggaactcaaagcagcagctttctgcagag
gagttggacgcacagctggatgcttataatgcaaggatggacaccagctaa
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integrated database retrieval system
