Arvicanthis niloticus (African grass rat): 117710115
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Entry
117710115 CDS
T08817
Name
(RefSeq) keratin, type I cytoskeletal 28
KO
K07604
type I keratin, acidic
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04382
Cornified envelope formation
anu04915
Estrogen signaling pathway
anu05150
Staphylococcus aureus infection
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09150 Organismal Systems
09152 Endocrine system
04915 Estrogen signaling pathway
117710115
09158 Development and regeneration
04382 Cornified envelope formation
117710115
09160 Human Diseases
09171 Infectious disease: bacterial
05150 Staphylococcus aureus infection
117710115
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
anu04812
]
117710115
04147 Exosome [BR:
anu04147
]
117710115
Cytoskeleton proteins [BR:
anu04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Types I and II: Acidic and basic keratins
117710115
Exosome [BR:
anu04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
117710115
Exosomal proteins of other body fluids (saliva and urine)
117710115
Exosomal proteins of colorectal cancer cells
117710115
Exosomal proteins of melanoma cells
117710115
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Gene cluster
GFIT
Motif
Pfam:
Filament
TPR_MLP1_2
COLEC12
ANIS5_cation-bd
DUF5703_N
Spectrin
Motif
Other DBs
NCBI-GeneID:
117710115
NCBI-ProteinID:
XP_034360613
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All DBs
Position
6:23108286..23118564
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AA seq
462 aa
AA seq
DB search
MSLRFSGGSRHVGIQSGSLRLPSGGAGFAGSSATAGSVAGSGFSWALGGTLGSAPGGSHA
TSALGNVTGVCFAGSEGGLLSGNEKVTMQNLNNRLASYLDNVKALEEANTELEKKIKTWH
EKYGPGSCRGLDRDYSKYHLTIEDLKSKVISSTAANANIILQIDNARLAADDFRLKYENE
LTLHQNVEADINGLRRVLDELTLCRTDQELQYESLSEEMTYLKKNHEEEMKVLQCAAGGN
VNVEMNAAPGVDLTVLLNNMRAEYEALAEQNRRDAEAWFQEKSATLQQQISNDLGAATSA
RTELTELKRSLQTLEIELQSLSATKHSLECSLAETEGNYCSQLAHIQAQISALEEQLHQV
RMETEGQKLEHEQLLDIKAHLEKEIETYCRLIDGDENSCSSSKGFESGSSGNSCKDVSKT
TLVKTVVEEIDQRGKVLSSRIHSIEEKMSKMSNGKAEQRVPF
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgtctctccggttttctggcggatccaggcacgttggcatacagtcgggatctctcagg
ctgcccagcggaggcgcaggctttgccgggagtagtgcgacggctggttcagttgctggt
agtggattttcttgggccttgggagggacactgggcagtgctcctggtgggagccatgcc
accagtgccctgggaaatgtcactggcgtttgcttcgctggaagtgaagggggtctcctc
tctggaaacgagaaagtcaccatgcagaatcttaacaaccgcttggcctcttacctggat
aacgtgaaggctctggaggaagccaacactgagctagagaaaaagatcaagacttggcat
gagaaatatggacctggatcttgccgtggacttgaccgtgactacagcaagtatcatcta
accattgaggaccttaaaagcaaggtcatctcctccacggctgctaatgctaatatcatt
ctacaaattgataacgccaggctggctgctgatgatttccgactaaagtatgaaaacgaa
ctcacccttcaccaaaacgtggaggccgacatcaatgggctgcggcgtgtgctggacgag
ctgaccctctgcaggacggaccaggagctgcagtatgaatccctgagtgaggagatgact
tatctcaagaagaaccacgaagaggaaatgaaagttctgcagtgcgcagctggaggcaac
gtgaacgtggagatgaacgcagccccaggcgtggacctcaccgtcctgctgaacaacatg
cgagcagagtacgaggccctggctgagcagaaccgcagggacgctgaggcctggttccaa
gagaagagcgccacgctgcagcaacagatctccaatgacttgggcgctgccacctcagcc
aggactgagctaacagaactgaagcgctccctgcagacgctggagatcgagctgcagtca
ctctcagccacgaaacactctctggagtgctccctggcggagaccgagggcaattactgc
tcgcagctggctcacatccaggctcagatcagcgccctggaggagcagctgcaccaggtg
aggatggagaccgagggccagaagctggaacatgagcagctgctggatatcaaggcccac
ctggaaaaggagatcgagacctactgccgcctcatagacggagacgagaattcctgctcc
agctcaaaggggtttgaatctggaagctcagggaattcatgcaaagatgtatctaaaacc
acactggtaaagacggtggttgaagaaatagatcagcgtggaaaggtcctgtcctccagg
atccactccatcgaggaaaagatgtctaagatgagcaacggcaaggctgagcagagggtt
cccttctag
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