Arvicanthis niloticus (African grass rat): 117710121
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Entry
117710121 CDS
T08817
Symbol
Fbxl20
Name
(RefSeq) F-box/LRR-repeat protein 20 isoform X1
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
anu04121
]
117710121 (Fbxl20)
Ubiquitin system [BR:
anu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
117710121 (Fbxl20)
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Gene cluster
GFIT
Motif
Pfam:
LRR_4
F-box-like
LRR_6
LRR_At5g56370
F-box
LRR_8
LRR_RPS2
LRR_EndoS
LRR_At1g61320_AtMIF1
F-box_4
Motif
Other DBs
NCBI-GeneID:
117710121
NCBI-ProteinID:
XP_034360623
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Position
6:24258670..24320110
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AA seq
436 aa
AA seq
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MRRDVNGVTKSRFEMFSNSDEAVINKKLPKELLLRIFSFLDVVTLCRCAQVSRAWNVLAL
DGSNWQRIDLFDFQRDIEGRVVENISKRCGGFLRKLSLRGCLGVGDNALRTFAQNCRNIE
VLSLNGCTKTTDATCTSLSKFCSKLRHLDLASCTSITNMSLKALSEGCPLLEQLNISWCD
QVTKDGIQALVRGCGGLKALFLKGCTQLEDEALKYIGAHCPELVTLNLQTCLQITDEGLI
TICRGCHKLQSLCASGCSNITDAILNALGQNCPRLRILEVARCSQLTDVGFTTLARNCHE
LEKMDLEECVQITDSTLIQLSIHCPRLQVLSLSHCELITDDGIRHLGNGACAHDQLEVIE
LDNCPLITDASLEHLKSCHSLERIELYDCQQITRAGIKRLRTHLPNIKVHAYFAPVTPPP
SVGGSRQRFCRCCIIL
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgaggagggacgtgaacggagtgaccaagagcaggtttgagatgttctcaaacagtgat
gaggctgtaatcaataaaaaacttcccaaagaacttctgctgaggatattttctttcctg
gatgttgttaccctgtgtcgctgtgctcaggtctccagggcctggaatgtcctagctctg
gatggcagtaactggcaacggatagacctgtttgatttccagagggacattgagggccgg
gtagtagaaaatatttcaaaacgatgtggaggctttttacgaaagctaagtcttcgtggg
tgtctcggagtaggagacaatgcattaaggacctttgcacaaaactgtaggaatattgaa
gtactgagtctcaacggatgtacaaagacgacagatgctacctgcactagccttagcaag
ttctgctccaaactcaggcacctcgacttggcttcctgtacgtcaataacaaacatgtct
ctcaaagctctgagtgagggctgtccactgttggagcagttgaacatttcctggtgtgac
caagtaaccaaggatggcattcaagcactagtgagaggctgtgggggtctcaaggcctta
ttcttaaaaggctgcactcagctagaagatgaggccctcaagtacataggtgcacactgc
cctgagctggtgacattgaacttacaaacctgcttacaaatcacagatgaaggtctcatc
accatatgcagagggtgtcataagttgcagtccctctgtgcctctgggtgctccaatatc
acagatgccatcctgaacgctctaggtcagaactgccctcgacttagaatattagaagtg
gccagatgttcccagttaacagatgtgggcttcactaccctggccaggaattgccatgaa
cttgaaaagatggacctagaagaatgtgtgcagatcacagatagcacattaatccaactt
tcaatacactgtcctcgacttcaggtgttgagtctttctcactgtgagctgatcacggac
gatggaatccgtcacctagggaacggggcctgtgcccacgaccagctggaggtgattgag
ctggacaactgcccactgatcaccgatgcatccctggagcacttgaagagctgtcacagc
cttgagcggatagaactctatgactgccagcagatcacacgggctggcatcaagagactc
aggacccatttacccaatattaaagtccacgcctacttcgcccctgtcactccaccccca
tcagtagggggcagcagacagcgcttctgcagatgctgtatcatcctatga
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