Arvicanthis niloticus (African grass rat): 117710123
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Entry
117710123 CDS
T08817
Symbol
Rhbdl3
Name
(RefSeq) rhomboid-related protein 3 isoform X1
KO
K02857
rhomboid-related protein 1/2/3 [EC:
3.4.21.105
]
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
anu01002
]
117710123 (Rhbdl3)
Enzymes [BR:
anu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
117710123 (Rhbdl3)
Peptidases and inhibitors [BR:
anu01002
]
Serine peptidases
Family S54: Rhomboid family
117710123 (Rhbdl3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhomboid
EF-hand_7
EF-hand_6
EF-hand_1
DUF5580_M
AIF-1
EF-hand_11
Motif
Other DBs
NCBI-GeneID:
117710123
NCBI-ProteinID:
XP_034360625
EnsemblRapid:
ENSANLG00005000516
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Position
6:complement(41524461..41577273)
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AA seq
404 aa
AA seq
DB search
MGEHPSPGPAVAACAEAERIEELEPEAEERLPAAPEDHWKVLFEKFDPGSTGYISTGTFR
SLLESHSSKLDPHKKEVLLALADSHADGQICYQDFVNLMSNKRSNSFRQAILQGNRRLSS
KALLEEKGLSLSQRLIRHVAYETLPREIDRKWYYDSYTCCPPPWFMITITLLEVALFLYN
GVLLDQFVLQVTHPRYLKNSLVYHPQLRAQAWRYVTYIFMHAGVEQLGLNVALQLLVGVP
LEMVHGATRIGLVYVAGVVAGSLAVSVADMTAPVVGSSGGVYALVSAHLANIVMNWSGMK
CQFKLLRMAVALICMSMEFGRAVWLRFHPSAYPPCPHPSFVAHLGGVAVGITLGVVVLRN
YEQRLQDQSLWWIFVTMYTIFVLFAVFWNIFAYTLLDLKLPPPP
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgggcgagcaccccagccccggccccgcagtggccgcctgcgccgaggcggagcgcatc
gaggagctggagcccgaggccgaggagcgactgcccgccgcgccagaagaccactggaaa
gtcctgtttgaaaagtttgaccctgggagcaccggctacatcagcacaggaacgttccgg
agcctcctggagagccacagctctaagctggacccacacaaaaaggaggtgctcctggct
ctcgcagacagccatgcagatgggcagatctgctaccaggactttgtcaacctgatgagc
aacaaacgttccaacagcttccgtcaggccatccttcagggaaaccgcagactgagcagc
aaggccctgctggaggagaaggggctgagcctctcacagcggctcatccgccacgtggcc
tacgagactctgccccgggagattgaccgcaagtggtactatgacagctacacctgctgc
cctccgccctggttcatgatcacaatcacgctgctggaggttgcccttttcctgtacaac
ggggtcctactggatcagtttgtgctgcaggtgacgcatcctcggtacctgaagaactct
ctggtttaccacccgcagctccgtgcacaggcttggcgctatgtgacatacatcttcatg
catgcaggggtggaacagctgggactcaatgtggcgctgcagctgctggtaggggtaccc
ctggagatggtacatggagccacccgaattggacttgtctacgtggctggtgttgtggca
ggctccttggcggtgtctgtggctgacatgactgcacctgtcgtgggctcttccggaggg
gtgtatgcgctcgtctctgcccacctcgccaacattgtcatgaactggtcaggcatgaag
tgccagttcaagctgcttcggatggctgtggccttgatctgtatgagtatggagttcggg
agggctgtgtggctccgtttccacccatcggcttatcccccgtgccctcacccaagcttt
gtggcacacttgggtggtgtggctgtgggcatcaccctgggcgtggtggttctcagaaac
tatgagcagaggctgcaggaccagtcgctgtggtggatctttgtgaccatgtacaccatc
ttcgtgctgtttgctgtcttctggaacatctttgcctatacactgctggacttgaagctg
ccaccacccccctaa
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