Arvicanthis niloticus (African grass rat): 117710133
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Entry
117710133 CDS
T08817
Symbol
Snapc4
Name
(RefSeq) snRNA-activating protein complex subunit 4 isoform X1
KO
K09453
snRNA-activating protein complex subunit 4
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
anu03000
]
117710133 (Snapc4)
03021 Transcription machinery [BR:
anu03021
]
117710133 (Snapc4)
Transcription factors [BR:
anu03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
117710133 (Snapc4)
Transcription machinery [BR:
anu03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
snRNA-activating protein complex (SNAPc)
117710133 (Snapc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
HTH_Hrp3
SLIDE
SANT_DAMP1_like
Motif
Other DBs
NCBI-GeneID:
117710133
NCBI-ProteinID:
XP_034360654
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Position
6:complement(107030436..107047863)
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AA seq
1336 aa
AA seq
DB search
MDINAEREKITQEIQELERILYPGSSSIHFEVSESSLSSDSEADSLPEEDLETAVAPVLE
EERSSEGSNEEEEDPKDKALPEDPETCLQLNMVYQEVIREKLAEVSQLLAQNQEQQEEIL
FDLAGTKCPKVKDGKSLPSYMYIGHFLKPYFKDKVTGVGPPANEETREKAAQGIKAFEQL
LVTKWKHWEKSLLRKSVVSDRLQRLLQPKLLKLEYLQEKQNRVSSELERQALEKQIKEAE
KEVQDINQLPEEALLGNRLDSHDWEKISNINFEGARSAEEIQKFWQSSEHPSISKQEWST
EEVERLKAIAATHGHLEWHLVAEELGTSRSAFQCLQKFQQYNKALKRKEWTAEEDHMLTQ
LVQEMRVGNHIPYRRIVYFMEGRDSMQLIYRWTKSLDPSLKRGFWAPEEDAKLLQAVAKY
GAQDWFKIREEVPGRSDAQCRDRYIRRLHFSLKKGRWNAKEEQQLIQLIEKYGVGHWARI
ASELPHRSGSQCLSKWKILARKKQHLQRRRGQRPRHSSQWSSSSSSSGSEDCGGSIGGGS
SSSSSSSSEDSDVELEESLQNSRTLAPLQYRVPDIDLWVPTRLITSQSQREGTGCYPVHP
AVSCCTQDATQNHHKEGSTTVSVPEKNQMQVPCETHSTVPRGVQCFHLSDTQLASAKGPA
CKSHTLVKERPRQPPLPNSRSESDPGNCMAGPHLRRLWHGTFQNKQRRKRQALHRRLLKH
RLLLAVIPWVGDINLACTQAPQRPAAIQTQADSIRMRLESARLASTPVFTLFIQLLQIDT
AGCMEVVRERKTQPPALFQPGSQNTQQAPSNAKNSTGCRLPSMPGEQTAKRASHKGRPRL
GSCRAEATPFQVPVAAPHGLRPKPKTVSELLREKRLREAQAKKATQPLAALHSQLLFPSP
VTLQPPLLPASHGAPVVGPATVSVELSVPVAPVMVNSSPSGSWQVGGISATDKQPPNLQT
SPLNSSHKETQIAAPAAFRSLALAPGQVPTSCLLSTGGQSCTTSQKQSLPKVLPILPAAP
NLTQLSVQPLSVPPVLNPPASGQPLATKSSLPVNWLLTAQKLLPIQVPAVVGLPQSVSTP
ETIGLQAKQLPSPAKTPAFLEQPPASTDTEPKGPQGQEIPPTPRPEKKALDLSLLSQESE
AATLTWLKGCQGACVPPLGSRMPYHPPSLCSLRALSSLLLHKQDLEQKASSLVASQAAGA
PPEPQAGALQASLELVQRQFQDNPAYLLLKTRFLAIFSFPAFLATLPPNSVPTTLSPAMA
VGSESDSEDLGDLELKDGTRQLDCMACRVQTSLAASDPKQRTPSPGAVSVPSHLTASDDL
DDLDVLRTRRARHSRK
NT seq
4011 nt
NT seq
+upstream
nt +downstream
nt
atggacatcaacgctgaacgagaaaaaataacacaagagatccaggaacttgaaaggatt
ttgtatcctggatcctccagcatccactttgaggtctctgaatccagtctcagttcggac
tcggaagcagattccctgcctgaggaggacttggagactgctgttgcccccgtcttggaa
gaagaaaggtcaagtgagggcagcaatgaggaggaggaggaccccaaggacaaagctctc
cctgaagaccctgagacctgtctgcagctaaatatggtctaccaggaggtgatccgggaa
aagctggcagaggttagccagttgctagcccagaaccaggagcagcaggaggagatcctg
tttgatctggctgggaccaaatgccccaaggtgaaggatggcaaaagcctgccttcatac
atgtatataggccacttcctgaaaccatacttcaaggacaaggtcactggagtggggcct
cctgccaatgaagaaacacgggagaaggctgcccagggaatcaaggcctttgaacagctc
ttggtgaccaagtggaaacactgggagaaatccttgctcaggaagtctgtagtgagtgac
cgcctgcaacgcctgcttcagcccaaattgctgaagcttgagtacctacaggagaaacag
aaccgagtctctagtgagttggaaaggcaggccctggagaagcagattaaggaagcagag
aaggaggttcaggacatcaaccagctcccagaggaagcactgctggggaaccggctggac
agccacgactgggagaagatctccaatattaattttgaaggagcccgaagtgcagaggag
atccagaagttctggcagagttctgagcatccgagcatcagtaagcaagaatggagcaca
gaagaagtagagaggctaaaagctatcgctgccacacatggccacctcgagtggcatttg
gttgcagaggaacttgggacaagtcgcagtgccttccagtgcctgcagaaattccagcag
tacaacaaagccctgaaacgcaaggagtggacagcagaggaagaccacatgctcacccag
ctggtccaagagatgcgcgttgggaaccatattccataccgcaggattgtctacttcatg
gaagggagagactccatgcaactgatctaccgttggaccaagagcttagatcccagcctg
aaaaggggattctgggccccagaggaagatgctaaattgcttcaagctgttgccaagtat
ggggcgcaggactggtttaaaatccgggaagaggtgccaggtaggagcgatgcccagtgc
agagaccgctacatcagaagattacatttcagcttgaagaagggacggtggaatgcaaaa
gaagaacagcagctgatccagttaatagaaaaatatggtgttggtcactgggcaagaata
gcttcagaacttccccatcggtcaggctcccagtgtctgagcaagtggaaaatcttggcc
aggaagaaacagcatctccagaggaggagagggcagaggccccgtcacagtagccagtgg
agctccagcagcagcagcagtggcagtgaggactgtgggggcagcatcggcggcggcagc
agcagcagcagcagcagcagcagtgaggactcagatgtggagctggaggagtctctgcag
aacagcagaacattggcccctctgcagtacagagtgccagacattgacctgtgggttcct
accaggctgatcaccagccagtcacagagagaagggacagggtgctacccagtacaccct
gctgtctcctgctgcactcaggatgccactcaaaatcaccacaaggaaggttctaccaca
gtctctgtgcctgagaaaaaccagatgcaggtgccctgtgagacccacagcactgttcca
agaggagtccaatgcttccacctctcagacactcagctagcaagtgcaaagggtccggca
tgcaagagccacacactggtgaaggaaagaccgaggcagccacccctgcctaattcacgc
tcagagtctgaccctggtaactgtatggctgggccccatctgcggcggctgtggcatgga
actttccagaataagcagagacgcaagagacaagctctacatcgcaggctccttaagcac
aggcttctgctggctgtgataccctgggtgggtgacatcaacctggcctgcacacaagct
ccccagagacctgcagcaatacagactcaagctgacagcatcaggatgcggttggagagt
gcccgcctggccagcactcctgtgttcacactgtttattcagctattgcagattgatact
gcaggctgcatggaagtggttcgagagaggaaaacccagccacctgcactgttccagcca
ggcagccagaacacccagcaggcaccctctaatgccaagaacagcacaggctgccgtctt
ccaagcatgccaggtgagcaaactgcaaagagagccagccacaaagggcgtccacgactg
ggatcctgcagggctgaggctacccccttccaagttcctgtagcagccccacatggcctc
cggccaaagcctaagactgtatctgagctgcttcgggagaagcggctccgtgaggcccag
gccaagaaggccactcagcctctcgctgccctccacagccagctgctgttcccctcacct
gtgaccctccagccccctctgctgccagcctcccatggtgccccagtagtcggccctgca
acggtcagtgtagaactctctgtacctgtggccccagtgatggtcaattcaagtccttct
ggctcctggcaggtgggtgggatctcagccacagacaaacagccccccaacctacaaacc
agtcccctaaattcttctcacaaagagacccagattgcagcccctgctgcttttaggagc
ctagccttagcccccgggcaggtccccacaagctgccttctgagtactggaggacagagt
tgtaccacatcccagaagcagagcctgcccaaggtcctgcccattctcccagcagccccc
aacctcactcagctgtctgtgcaacccctcagtgtgccaccagttcttaacccaccggca
agtgggcagcccctggcaaccaagtcaagcctgcctgtcaactggcttctcacagctcag
aagctgctccctatccaagtgccagctgtggtgggcctcccccagtcagtcagtacccct
gagactataggactacaagcaaaacaactaccttcccctgccaagactcctgcttttctg
gaacagcctccagccagtacagacacagaacccaaaggacctcagggccaggaaatacca
cctacacctaggcccgaaaagaaggctttggacctaagtctgctttcccaggaaagtgag
gcagccactctgacatggctgaaggggtgccaaggtgcttgtgtgcctccactggggagc
aggatgccctatcatcccccttccctgtgcagcttgcgagcattgtccagcctcctcctc
cataagcaggatctggagcagaaggcttcctctctggtggccagccaggcagctggggcc
ccacctgagccccaggctggggccctacaagcttccctggagctggtacagaggcaattc
caggacaacccagcctacctcctgctaaagactcgtttcctggctatcttctcctttcct
gcattcctggccactctgccccccaacagtgtccccaccaccctatcaccagccatggct
gtgggttctgagagtgacagtgaagatcttggtgacctggagctcaaggacgggactaga
cagctggactgcatggcctgcagagtacaaaccagcctggcagcctcagaccccaaacag
agaactccaagtcctggtgcggtctctgttccctcccacctgactgcttctgatgacctt
gatgaccttgatgtgctcagaactcgacgtgctcgccattcccggaaatag
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