KEGG   Arvicanthis niloticus (African grass rat): 117710248
Entry
117710248         CDS       T08817                                 
Name
(RefSeq) elongin-B-like
  KO
K03873  elongin-B
Organism
anu  Arvicanthis niloticus (African grass rat)
Pathway
anu04066  HIF-1 signaling pathway
anu04120  Ubiquitin mediated proteolysis
anu05170  Human immunodeficiency virus 1 infection
anu05200  Pathways in cancer
anu05211  Renal cell carcinoma
Brite
KEGG Orthology (KO) [BR:anu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    117710248
 09130 Environmental Information Processing
  09132 Signal transduction
   04066 HIF-1 signaling pathway
    117710248
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    117710248
  09162 Cancer: specific types
   05211 Renal cell carcinoma
    117710248
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    117710248
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:anu04121]
    117710248
   03400 DNA repair and recombination proteins [BR:anu03400]
    117710248
Ubiquitin system [BR:anu04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul2 complex
    Adoptor protein
     117710248
   Cul5 complex
     117710248
DNA repair and recombination proteins [BR:anu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     117710248
SSDB
Motif
Pfam: ubiquitin
Other DBs
NCBI-GeneID: 117710248
NCBI-ProteinID: XP_034360893
LinkDB
Position
6:33232297..33233484
AA seq 149 aa
MDVFLVIRHKETTIFAEAKESSPVLELKHIVEGILKRPPEEQLLFKDDQLLDEMKTLAEC
GFTSEVAKPQAPATVGLAFRTEDAFEGPSIFPYCCPPLHQALRKDSANSGKEQVVQGGLQ
ANLLKTHFPNKHRDKKEVALFLQFSISDS
NT seq 450 nt   +upstreamnt  +downstreamnt
atggatgtgtttctggtgatccgacacaaggagaccaccatctttgctgaggccaaggag
tccagcccagtgttggagctcaagcacatagttgagggcatcctgaagaggcctcctgag
gagcagctgctgttcaaggatgaccagctccttgatgaaatgaaaactctagctgaatgt
ggctttaccagcgaggtagcaaagccacaggccccagccacagtgggtctggccttcaga
acagaagatgcctttgaaggcccttctatcttcccctattgttgtccaccactacatcaa
gcactgaggaaagattctgcaaacagtggtaaggaacaagttgtacagggagggctccag
gccaacctcctaaagacccattttccaaacaagcacagagacaagaaggaagtggctctg
ttcctgcagttctcaatctcagattcctag

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