Arvicanthis niloticus (African grass rat): 117710459
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Entry
117710459 CDS
T08817
Symbol
Top3a
Name
(RefSeq) DNA topoisomerase 3-alpha isoform X2
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu03440
Homologous recombination
anu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
117710459 (Top3a)
03460 Fanconi anemia pathway
117710459 (Top3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
anu03032
]
117710459 (Top3a)
03400 DNA repair and recombination proteins [BR:
anu03400
]
117710459 (Top3a)
Enzymes [BR:
anu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
117710459 (Top3a)
DNA replication proteins [BR:
anu03032
]
Eukaryotic type
DNA Topoisomerases
117710459 (Top3a)
DNA repair and recombination proteins [BR:
anu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
117710459 (Top3a)
FA (Fanconi anemia) pathway
117710459 (Top3a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_GRF_2
zf-C2H2_10
Motif
Other DBs
NCBI-GeneID:
117710459
NCBI-ProteinID:
XP_034361147
LinkDB
All DBs
Position
6:60793420..60831896
Genome browser
AA seq
1003 aa
AA seq
DB search
MIFPVTLLAFQWQRRPGGRALSRAAMEVVFRGVRKVLCVAEKNDAAKGIADLLSNGRMRR
KEGLSKFNKIYEFDYRLYGQNVTMIMTSVSGHLLAHDFQMQFRKWQSCNPLVLFEAEIEK
YCPENFVDIKKTLERETQHCQALVIWTDCDREGENIGFEIIHVCKAVKPNLQVLRARFSE
ITPHAVRAACENLTDPDQRVSDAVDVRQELDLRIGAAFTRFQTLRLQRVFPEALAQQLIS
YGSCQFPTLGFVVERFKAIQAFVPEVFHRIKVTHDHKDGTVEFNWKRYRLFNHTACLVLY
QLCMEDPMATVVEVRSKPKSKWRPQALDTVELEKLASRKLRINAKETMRIAEKLYTQGYI
SYPRTETNIFPKDLNLVALVEQQTLDPHWGAFAQNILERGGPTPRNGSKSDQAHPPIHPT
KYTSSLQGDDRRLYEFIVRHFLACCSQDAQGQETTVEIDIAQERFVAHGLIILARNYLDV
YPYDHWSDKLLPVYEQGFRFQPSTVEMVDGETSPPQLLTEADLIALMEKHGIGTDATHAE
HIETIKARMYVGLTSDKRFLPGHLGMGLVEGYDSMGYEMSKPDLRAELEADLKLICEGKK
DKFQVLRQQVQKYKQVFIEAVAKAAKLDEALSQYLGERTEVAQQEEIYPALPEPVRKCPQ
CNKDMVLKTKKSGGFYLSCTGFPECRTAVWFPDSVLEASRDNSVCSVCQPSPVYRLKLKF
KRGSLPPTMPLEFVGCIGGCDETLKEIFSLRFSQAPPRASQPSGHLQASQALNRMDSSQH
SLSQPLVNRHTGPSKAVAQTLLPPTAAGESNSVTCNCGQEAVLLTVRKQGPNQGRHFYKC
SGGNCSFFLWADGSHPTGGGPPTSAPRPPGNSVGCTSGLGSHMDGFGSLGGDSDGGTSCL
CGQPAVTRTVQKDGPNKGRQFHTCAKPREQQCGFFQWVDENVAPGSFAAPAWPGGRGKAQ
RPEAASKRQRAGSLDAGSTVKKPRKCSLCHQPGHTRPFCPQNR
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
atgatcttcccggtcaccctcttagcgtttcagtggcagcgaaggcctggaggccgtgcc
ctgtcccgcgctgccatggaagtggtcttccgaggagtgcgaaaagttctctgcgtggcg
gagaaaaacgacgctgccaagggaatcgccgacttgctgtccaacggtcgtatgaggcgg
aaagaaggcctttctaaattcaacaagatttatgaatttgactatcgtctgtatggccag
aatgttactatgataatgacttctgtctctggacatttgctggctcatgacttccagatg
cagtttcggaaatggcagagctgtaatcccctagtcctctttgaagcagaaattgaaaag
tattgcccagaaaactttgtagacatcaagaaaactcttgaacgagagacacagcattgt
caggcattggtgatctggactgactgtgacagagaaggtgaaaacatcgggtttgagatc
atccatgtatgcaaggctgtaaagcccaatctacaggtgctgagagcccgcttctctgag
atcacgccacatgccgttagggcagcctgtgaaaacttaactgatcccgaccagagagta
agtgatgcagtggacgtgaggcaagagctggatctgaggatcggagctgccttcacgagg
ttccaaaccctgcggctccagagggttttccctgaggcactggcacagcagctcatcagc
tatggcagctgccagttcccaacactggggtttgtggtggagaggttcaaggccattcag
gcttttgtgccggaagtcttccacagaattaaagtaactcatgaccacaaagatgggacc
gtagagttcaactggaaaagataccgtctttttaaccacacagcttgtcttgtcctctat
cagttgtgtatggaggatcccatggcaaccgtggtagaggtcaggtctaagccaaagagc
aagtggaggcctcaagcgttggacactgtggagctagagaaactggcgtctcggaaattg
agaataaatgccaaagaaaccatgaggattgcagaaaagctctatacacaagggtacatc
agctacccccggacagaaacaaacatcttccccaaagacttaaacctggttgcattggtg
gaacagcagactctggatccacactggggggcttttgctcagaacattctagagcgaggt
ggccccactccacgaaatgggagcaaatctgatcaagctcaccctcccattcaccccacc
aaatacaccagcagcttgcagggagacgatcggcgactgtacgagttcattgttcgccat
ttcctggcttgctgctctcaggatgctcaggggcaagagactaccgtggagattgacatt
gcccaggagcgctttgtagcccacggcctcataattctggcccgtaactacctagatgtg
tatccgtatgatcactggagtgacaagctcctgcctgtctatgagcaaggcttccgcttt
cagcccagcactgtggaaatggtggatggggaaactagcccaccccaactgcttactgaa
gctgacctcatcgccctcatggagaaacatggtatcggtactgatgcaactcacgcagag
cacattgagaccatcaaagcccggatgtatgtgggactcacctcagacaagcggtttctg
ccggggcacctaggcatgggacttgtggaaggttacgattccatgggttatgagatgtcc
aagcctgacctccgtgccgagctggaagctgatctcaagctgatctgtgagggcaagaag
gataagtttcaggttctaaggcagcaagtgcagaaatacaagcaggttttcattgaagca
gtggcgaaggcagcgaagttggatgaggccttatctcagtacttaggagaaaggacagag
gtagcccagcaagaagagatctacccagccttgccagagcctgttcggaagtgcccacag
tgtaacaaggatatggtcctcaagaccaagaagagtggtgggttctaccttagctgcaca
gggttcccagaatgtcggacagctgtgtggtttcctgactctgtgttggaagccagcagg
gacaacagtgtgtgttcggtttgtcagccatcccctgtgtacaggttgaagctgaagttt
aagcgaggtagccttcccccaactatgcccctggagtttgtcggctgcatcggtggatgt
gacgagactttgaaggaaatcttcagcctgcgattttcacaggctcccccacgggcgagc
cagccctctggccacctgcaggccagccaggccctcaacaggatggacagcagtcagcat
agcctgtctcaacctctggttaacagacatactggaccttcaaaggcagtggcccaaacc
ttgctaccacccactgctgctggtgaaagcaactctgtgacctgcaattgtggccaggag
gctgtactgctcactgtccgcaagcagggccccaaccagggccggcacttctataagtgc
agtggtggcaattgcagcttcttcctgtgggctgacggcagccatcccactggaggaggg
ccccccacctctgcaccgagacctccaggaaactctgtaggatgcacatcaggcttaggc
agccacatggatgggtttggcagccttggtggtgacagtgatggaggtacatcctgccta
tgcgggcagcctgctgtcacacggactgtacaaaaggatggacccaacaaaggacgccag
ttccacacctgtgccaagccacgagagcagcagtgtggcttctttcagtgggtggatgag
aacgtggccccagggagttttgcagccccagcatggccaggaggcagagggaaagcccag
agaccagaggctgcaagcaaaagacaaagagctggttccttagatgcagggtctacagta
aaaaagcctcgaaagtgtagcctctgccaccagcctggacacacccggcccttttgtcct
cagaacagatga
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