Arvicanthis niloticus (African grass rat): 117710463
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Entry
117710463 CDS
T08817
Symbol
Shmt1
Name
(RefSeq) serine hydroxymethyltransferase, cytosolic
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu00260
Glycine, serine and threonine metabolism
anu00630
Glyoxylate and dicarboxylate metabolism
anu00670
One carbon pool by folate
anu01100
Metabolic pathways
anu01200
Carbon metabolism
anu01230
Biosynthesis of amino acids
anu01240
Biosynthesis of cofactors
anu01523
Antifolate resistance
anu04981
Folate transport and metabolism
Module
anu_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
117710463 (Shmt1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
117710463 (Shmt1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
117710463 (Shmt1)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
117710463 (Shmt1)
09160 Human Diseases
09176 Drug resistance: antineoplastic
01523 Antifolate resistance
117710463 (Shmt1)
Enzymes [BR:
anu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
117710463 (Shmt1)
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Motif
Pfam:
SHMT
Aminotran_1_2
Motif
Other DBs
NCBI-GeneID:
117710463
NCBI-ProteinID:
XP_034361151
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Position
6:60761990..60781709
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AA seq
478 aa
AA seq
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MAERDPALWASHEKMLTQPLKDSDAEVYSIIKKESNRQRVGLELIASENFASRAVLEALG
SCLNNKYSEGYPGQRYYGGTEFIDELETLCQKRALQTYRLDPQCWGVNVQPYSGSPANFA
VYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMPYKVYPDTGYINYDQL
EENAGLFHPKLIIAGTSCYSRNLDYARLRKIADDNGAYLMADMAHISGLVAAGVVPSPFE
HCHVVTTTTHKTLRGCRAGMIFYRKGVRSVDPKTGKETFYELESLINSAVFPGLQGGPHN
HAIAGVAVALKQAMTTEFKIYQLQVLANCRALSDALTELGYKIVTGGSDNHLILIDLRSK
GTDGGRAEKVLEACSIACNKNTCPGDRSALRPSGLRLGTPALTSRGLLEEDFQKVAHFIH
RGIELTLQIQSHMAARATLKEFKEKLAGDEKFQSAVATLREEVENFASNFSLPGLPDF
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaagggatcctgccctgtgggcttctcatgagaagatgttgacacagcccctc
aaggacagcgatgctgaggtttacagcatcataaaaaaggagagcaaccggcagagggtt
ggattggagctgatcgcctcggagaactttgccagcagagccgtgttggaggccctagga
tcttgcttaaataacaaatactctgaggggtatccgggccaaaggtattatggtgggact
gagttcattgatgagctggagacgctgtgtcagaagcgtgcattacagacctaccgtctg
gatcctcagtgctggggtgtcaatgtccagccttattcaggctcccctgcaaactttgct
gtgtatactgccctggtagagccccatgggcggatcatgggcttggacctgccagatggt
ggccatctgacacatggcttcatgacagacaagaagaaaatctcggccacctctatcttc
tttgaatctatgccttataaggtgtacccagacactgggtacatcaactatgaccagctg
gaggagaatgctggcctcttccacccgaagctgatcattgcagggaccagctgctactcc
cggaacctggactacgcacgtctgcgaaagattgcggatgacaatggggcatatctcatg
gcagatatggcacatatcagtgggcttgtggcagctggtgtggtgccctccccctttgaa
cactgccatgtagtgactactacaacccacaagaccctgagaggctgccgtgctggtatg
atattctacagaaagggtgtgcgcagtgtggatcccaagactggcaaagagactttctat
gaactggagtccctcatcaactctgctgtgttcccaggcctacaggggggtcctcacaac
catgccattgctggtgttgctgtggccctgaagcaagccatgactacagaattcaaaatc
taccagctccaggtgttggccaactgcagggctctgtctgatgcactcacagagctaggc
tacaaaatagtcacaggtggctctgataatcacttgatcctaatagatctgcgttctaag
ggtactgatggtggaagggctgaaaaggtactagaagcctgttccattgcctgcaacaag
aatacctgcccaggtgacaggagcgcattacggcccagtggattgcgactggggactccc
gcattgacgtcccgaggacttttggaagaagacttccaaaaagtagcacactttatccac
agagggatagagttaactctgcagattcagagccacatggccgcgagggccacgctgaaa
gagttcaaggagaagctggcaggggatgagaagttccagagtgctgtggcaactctccgg
gaagaagtggagaattttgcttccaacttctcactacctggccttcccgacttttga
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