Arvicanthis niloticus (African grass rat): 117710480
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Entry
117710480 CDS
T08817
Symbol
Eif4a1
Name
(RefSeq) eukaryotic initiation factor 4A-I isoform X1
KO
K03257
translation initiation factor 4A
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
anu03019
]
117710480 (Eif4a1)
03012 Translation factors [BR:
anu03012
]
117710480 (Eif4a1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
anu04147
]
117710480 (Eif4a1)
Messenger RNA biogenesis [BR:
anu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
117710480 (Eif4a1)
mRNA cycle factors
Stress granule specific factors
117710480 (Eif4a1)
Translation factors [BR:
anu03012
]
Eukaryotic type
Initiation factors
eIF-4
117710480 (Eif4a1)
Exosome [BR:
anu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117710480 (Eif4a1)
Exosomal proteins of bladder cancer cells
117710480 (Eif4a1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
UvrD-helicase
AAA_30
Flavi_DEAD
NAT10_TcmA_helicase
Motif
Other DBs
NCBI-GeneID:
117710480
NCBI-ProteinID:
XP_034361189
LinkDB
All DBs
Position
6:52113636..52119484
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AA seq
406 aa
AA seq
DB search
MSASQDSRSRDNGPDGMEPEGVIESNWNEIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQ
RAILPCIKGYDVIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVV
MALGDYMGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFV
LDEADEMLSRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKEE
LTLEGIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVS
AMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRI
GRGGRFGRKGVAINMVTEEDKRTLRDIETFYNTSIEEMPLNVADLI
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgagtcaggattctcgatccagagacaatggccctgatggcatggagccggaa
ggcgtcatcgagagtaactggaatgagattgtggatagcttcgatgacatgaatctctca
gaatccctcctccgtgggatttacgcctatggttttgagaagccctctgccatccagcag
cgagctattcttccttgtatcaagggttatgatgtgattgctcaagcccagtctgggact
gggaaaacagctacatttgccatatcaattctgcagcagattgaattagacctaaaggct
actcaggctttggttctggcacccactcgtgaattggctcagcagatacaaaaggtggtt
atggcattaggagactacatgggtgcgtcttgtcatgcctgtattgggggcaccaatgtg
cgtgctgaggtgcagaagctgcaaatggaagctccccatatcatcgtgggcacccctggc
cgggtgtttgatatgcttaaccggagatacctgtcccccaaatacatcaagatgttcgta
ctggatgaagcagatgagatgttaagccggggctttaaggatcagatctatgatatattc
caaaagctcaacagtaacacacaggtagttttgttgtctgctacaatgccgtctgatgtc
cttgaggtgaccaagaagttcatgagagatcctattcggattcttgtcaagaaggaagag
ttgaccctggagggtatccgccaattctacatcaatgtggagcgagaggagtggaagctt
gacacattgtgtgacttgtatgaaacactgaccatcacccaggcagtaatctttatcaat
accagaaggaaggtggactggctcactgagaagatgcatgcccgggatttcactgtttcc
gccatgcacggagatatggaccaaaaggaacgagatgtaatcatgagggagttccgatct
ggctctagcagagtattaattaccactgacctgttggccagaggcattgacgtgcagcag
gtctccttagtcatcaattacgaccttcccactaacagggaaaactatatccacagaatc
ggtcgaggtggtcggtttggccgaaagggtgtggctattaacatggtgactgaagaagac
aagaggactcttcgagacattgagactttctacaacacctccattgaagagatgcccctc
aacgttgctgacctcatttga
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