Arvicanthis niloticus (African grass rat): 117710495
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Entry
117710495 CDS
T08817
Symbol
Ppl
Name
(RefSeq) periplakin
KO
K10386
periplakin
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
117710495 (Ppl)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
anu04812
]
117710495 (Ppl)
Cytoskeleton proteins [BR:
anu04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
117710495 (Ppl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin_1st_PEPL
SH3_10
Plectin
Spectrin_3
Spectrin
Spectrin_4
Motif
Other DBs
NCBI-GeneID:
117710495
NCBI-ProteinID:
XP_034361243
LinkDB
All DBs
Position
6:complement(94751442..94797975)
Genome browser
AA seq
1754 aa
AA seq
DB search
MHSLFRKKNKGKYSPTVQTRSISNKELSDLIEQLQKNADQVERNIVDTEAKMQSDLARMQ
EGQLPEHQDATLQNVSDSEKLLYVLEADSAIAKHMKHPQGDMIAEDIRQLKERVTNLRGK
HKQMYSLAVKEADPKVNWDALVDEKLDKLSSQSFGTDLPLVDSQVEQHNIFHNEVKAIGP
HLAKDKEQNSELQAKYQKLLAASQARQQHLSSLQDYMQRCTNELYWLDQQAKGRMQYDWS
DRNLDYPSRRRQYENFINRNLEAKEERINKLHTEGDQLLTAEHPGRNSIEAHMEAVHAEW
KEYLNLLICEESHLKYMEDYHQFHKDMKDAQELLHKVDSDLNQKYSPDFKDRYQLELLLR
ELDDQEKALDKYEDVVRGLQRRAQQVVPLKYRRETPLKPIPVEALCDFEGDQGLISRGYS
YMLQKNNGESWELTDSTGKKLTAPAVCFIIPPTDPEALALADSLGSQYRSLRQKATGSKH
ALQQRHEVLRTENPGDASDLQGRQLLAGLDKVASDLDRQEKAITGILRPPLEQGRAIEDS
AERAKDLKNITNELLQIEPEKTQCTAESEAFVQALPGSGTTPLLKTRVEDTNQKYERLVR
LLEAAQEKVDVANRLENSLQRGRELLASHENRLIQDDTMPESGYMLDSKRQELEAMASEL
QAQKSLLGEVEQNLQVAKQCSNLLASRFQEHCPDLERQEAEVHKLHQRFNNLSQQVERRA
QSLQSARAAYDEYCSGYEQVLQFLAKTPSYEPQETDSLSQMETKLKNQKNLLDEIASREQ
EVQKVYADSQQYQQAVKDYELEAEKLRSLLDLENGRNSHVNKRARLQSPAAKVKEEEATL
AAKFTEVNAINRQRLQNLEFALNLLRQQPEAGVTHETLQRGKPGSGKEETWKIKKELEEE
TERRQQLENEVKSAQEEIQTLKDQGPQESLVRKEVLKKVPDPALEENFQQLQQTLAEEQH
KNQLLQEELGALQLRLQALEQETRDGGQEYVVKEVLRIEPDRAQEDEVLQLREELETLRR
QKGAREAEVLLLQQRVAALAAEKSRVQEKVTEREVVKLQNDPQLEAEYRRLQEEHQREGT
FREKQEEELSFLQAKLRRLEKERAMAEGKITVKEVLKVEKDAAMEREVNDLTRQYEDEAA
KARSGQREKTELLRKIWALEEENAKVVVQEKVREIVRPDPKAESEVANLRLELVEQERKF
RGAEEQLKSYQSELEALRNRGPQVEVKEVTKEVIKYTTDPETEQELQRLREEIMDKTRLI
ERCDLEIYQLKQEIQALKDTKPQVQTREVVQEILQFQEDPQTKKEVESLRIQLSEEQKKQ
VDLEGERASQEEKIKRKEEELAQGKERVVRQEVVQYEDEPDLRAEVTAFTDSIDAELRQI
DKLHVELRRLQHRRAELERQLEELERERQARRAAELEVQRLQQRLAALEQEEAKTGEKVT
HTQKVVLQQDPQQTREHALLRAQLEEERHRRQLLEGELEPLRRKLAVLEKAEIKEKVVFS
ESVQVEKGDTEQEIQRLKKSLEEESRSKRELDSEVTRLEAKLSELEFYNSKSSKELDFLR
EENHKLQLERQNLQLETRRLQSEIEMAATESRDLKNITMVDSGTHLNSRLWSLEKELDDL
KKMSKDKDLEIDELQRRLGSVAVKREQRENHLRRSIVVIDPDTGRELSPEEAHRAGLIDW
KMFVKLRSQECDWEEISVKGPNGESSVIHDRKSGKKFSIEDALQSGRLTPAQYDRYVNKD
MSIQELAVLVSGQK
NT seq
5265 nt
NT seq
+upstream
nt +downstream
nt
atgcactcgctcttcaggaagaaaaacaaaggcaaatacagcccaacagtgcagacgcgg
agcatctccaacaaggaactctcagatctgattgagcagctgcagaagaatgcggaccag
gtggaaaggaacattgtggacaccgaggccaagatgcagagtgacttggctcggatgcaa
gaggggcagctccctgaacaccaggatgcgaccctgcagaatgtgtctgactcagaaaag
ctgctgtacgtgctggaggcagattcagccatcgccaaacacatgaagcacccacaaggg
gacatgatcgccgaggacatccgccagctgaaagagcgtgtgaccaacctgcggggaaaa
cacaagcagatgtacagcctggcagtgaaggaggctgacccgaaggtcaactgggatgcc
ctggtggatgagaagctggacaagctgagcagccagagttttgggactgaccttcctctg
gtggacagccaggtggagcaacacaacatcttccacaatgaagtcaaagccatcgggccc
caccttgccaaggacaaggagcagaacagcgaactccaagccaagtatcagaagttgctg
gcagcatcacaggcacggcagcagcacctgagctccctgcaggactacatgcaacgctgc
accaatgagctgtactggctggaccagcaagccaagggccgcatgcagtatgactggagc
gaccgcaacctggactaccccagccgccggcgccagtacgagaatttcatcaaccggaac
ctggaggccaaagaagaaagaattaacaaactgcacactgaaggcgaccaactgctgaca
gctgagcatccggggaggaactccattgaggcacacatggaggccgtgcacgcagagtgg
aaggagtacctgaacctgctcatctgtgaggaaagccatctgaaatacatggaagactac
caccaatttcacaaagacatgaaggatgctcaggagctgctccacaaggtggactcagac
ttgaaccagaaatacagccctgacttcaaagaccggtatcagctagagctgttgcttcgg
gagctggatgaccaggagaaggctctggacaagtatgaggatgtggtgcggggcctgcag
aggcgagcgcagcaagtggtaccactcaagtaccgccgcgagacaccgctcaagcccatc
cctgtggaggccctctgcgactttgagggtgaccagggcctgatctctcggggctatagt
tacatgttgcagaagaacaacggagagagctgggagctgacggacagcactgggaagaag
ctgactgccccagcagtctgcttcatcattccccccactgaccctgaggccttggctctt
gctgacagcctgggcagtcagtaccggagcttgcggcagaaggcgactgggagcaaacac
gcgctccagcaacggcatgaggtgctaaggacggagaaccctggagatgcctctgatctt
caggggcgacagctgctggctggcttggacaaagtggccagtgacctggatcgtcaggaa
aaggctatcacaggaatcctacggccaccacttgagcagggacgggcaatagaggacagt
gctgagcgggccaaggacctcaagaacattaccaatgagctgctacagattgagccagag
aagacacagtgcacagccgagagtgaggcctttgtgcaggctctcccgggcagcggcacc
acacccttgctgaagacccgggtggaagacaccaaccagaaatatgaacgactggtacgg
ctgctagaggcagcccaggagaaggtggatgtggccaatcgcctggagaacagtctgcaa
cggggcagggagctgctggcctctcacgagaacaggctgatccaggatgacacaatgcct
gaaagtggctacatgttggacagcaagaggcaggagttggaggccatggcttctgagctg
caggcccagaagtccctcctgggtgaggtggaacagaacctgcaggtggccaagcagtgc
tccaatttgctggccagccgcttccaagagcactgccctgacctggagcgacaggaggct
gaggtgcacaagctccaccaacgtttcaacaacctgagccagcaggtggaacgcagggcc
cagagcctgcagagtgccagggctgcctatgatgagtactgcagtggttatgagcaggtg
ctccagttcttggccaagactcccagctatgagccccaggagacagacagcctcagccag
atggagaccaagctgaagaaccagaagaacttgcttgatgagatagcaagcagggaacaa
gaggtgcagaaggtctatgcagattcccagcagtaccagcaagcggtgaaggactacgag
cttgaagcagagaagctaaggtccctgctggacctggagaacggacggaacagccacgtg
aacaagagagccaggctgcagtctcctgctgccaaagtgaaggaagaggaagctactctt
gctgccaagttcacagaggttaacgccatcaacagacagaggctacagaatttggagttt
gcactgaatctcttgagacagcaaccagaagcaggagtgacccatgagaccctgcaaagg
ggaaagccaggctctggcaaggaggaaacatggaagattaagaaggaactggaagaggag
acggagcgaaggcaacagctggaaaatgaggtcaagagtgcccaggaggaaatccagacc
ctgaaggatcaagggcctcaggagtcattggtgaggaaggaggtgctaaagaaggtgcca
gaccccgccctggaggagaatttccagcagctgcagcagaccctggctgaggaacagcac
aagaaccagctgttgcaggaggagctgggagcactgcagctccggctgcaggccctagag
caggagaccagggacgggggacaagagtatgtggtcaaggaggtcttgcgcattgagcca
gacagagcccaggaggatgaggtcttgcagcttcgggaggagctggagacactgcggcgc
cagaaaggtgcccgagaggctgaagtgctactcttacagcagcgtgtagcagccctggct
gctgagaagagcagggtacaggaaaaggtcactgagagagaggtggtaaagctacagaat
gacccccagctggaggcagaataccggaggctgcaggaggagcaccagcgggagggcaca
ttcagggagaagcaggaagaggagttgagtttcctacaagcgaagctcaggagactggag
aaagaacgagccatggcagaaggcaagatcactgtcaaagaggtgctcaaggtggagaaa
gatgcagccatggagagggaggtcaatgacctcacccgccagtatgaggacgaggctgcc
aaggcacgcagtggccagcgggagaagacagagcttctcagaaagatatgggccctggaa
gaggaaaatgccaaggtagtggtacaggagaaggtccgagagatcgtgcggccagatccc
aaggcagagagtgaagtggccaatctccgcctggagctagtggagcaggagcgtaaattc
aggggtgccgaggagcagctgaagagctaccagagtgagctggaggcccttcggaaccgt
gggccacaggtagaagtcaaagaggtgaccaaagaggtcattaaatacacaactgaccca
gagacggagcaggaactccagcggctcagggaggagatcatggacaagaccagattaata
gaaaggtgtgatctggagatttaccagctgaagcaggagatccaggccctgaaggacacc
aagccacaggtgcagactagagaggtggtccaggaaatcctgcaattccaggaagacccc
caaaccaagaaggaggtagagtctctgcgtatacagctgtcagaagaacagaagaaacag
gtggacctggaaggggagcgggcatcccaggaagagaagatcaaacgcaaggaggaagag
ctggcacagggtaaagaaagggttgtacgccaggaggtggtccagtatgaagatgagcca
gatctgcgagctgaggtgactgcctttacagacagcattgatgcagagctgcggcagatc
gataaattgcacgtggagctacggcggctacagcatcgccgagcagagctggagaggcag
ctggaggagctggagcgtgagaggcaggcacggagggcagctgagctggaggtacagagg
ctgcaacagcggctggctgcactggagcaggaggaggccaagactggggagaaggtgacc
cacacacaaaaggtagtgctgcagcaggatccacagcagaccagggagcatgccctgctc
agagcccagctggaggaagagcggcaccggaggcagctactggagggtgagcttgagccc
ctgcgtagaaagttggctgtcctggagaaggcagagatcaaagaaaaggtggtcttctct
gagagtgtccaggtagaaaagggtgacacagagcaagagatccagcggctcaagaaaagc
ctggaagaggagagccgaagcaagagggagctggattcagaggtgacccggctggaagcc
aagttatctgagctagaattctataattccaagtcatccaaggaactagatttcctgaga
gaagaaaatcacaagctacagctagagcggcaaaacctgcagctagagacccggagactg
caatcagagattgagatggcagcaacagaaagtcgagatctgaagaacataaccatggta
gactctggaacccacctaaactctaggctgtggtctctagagaaggaactggatgacctc
aagaagatgtccaaggacaaggatttggagatcgatgagctgcagaggcgtctgggctct
gtggccgtcaagagagagcagagggagaaccacctgaggcgctccatagtggtcattgac
cctgacacaggtcgtgagctgtccccagaagaggcccaccgggctgggctcatcgactgg
aaaatgtttgtgaagctcagaagccaggagtgcgactgggaggagatatcagtgaaaggt
cctaatggggaatcatcagtaatccatgacaggaagtctggcaagaagttctccattgag
gatgctctgcagagtggcaggctaacccctgctcagtatgaccgctatgtcaacaaggat
atgtccattcaggagctggcagtcttggtgtctgggcagaagtag
DBGET
integrated database retrieval system
