Arvicanthis niloticus (African grass rat): 117710556
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Entry
117710556 CDS
T08817
Symbol
Ctr9
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
anu03021
]
117710556 (Ctr9)
Transcription machinery [BR:
anu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
117710556 (Ctr9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_19
TPR_2
TPR_14
TPR_8
TPR_16
TPR_CcmH_CycH
TPR_12
TPR_17
TPR_10
TPR_11
TPR_7
TPR_6
TPR_Slam
ARM_TT21_4th
TPR_9
ANAPC3
TPR_EMC2
HAT_PRP39_N
Motif
Other DBs
NCBI-GeneID:
117710556
NCBI-ProteinID:
XP_034361385
LinkDB
All DBs
Position
1:78812955..78839130
Genome browser
AA seq
1173 aa
AA seq
DB search
MSRGSIEIPLRDTDEVIELDFDQLPEGDEVISILKQEHTQLHIWIALALEYYKQGKTEEF
VKLLEAARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNKKDLITQATLLYTMA
DKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPALLGKACISFNKKDYR
GALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALELNSKCVGALVGLAV
LELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNTE
VEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASSSFVLPFFGLGQMYIYRGDKENA
SQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVEAWIELAQ
ILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYFLASLDR
AKAEAEHDEHYYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAM
ARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPATQSD
TYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHK
GYFREARDVFAQVREATADISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVV
LYLARALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVL
NAVKELELAHRYFSYLSKVGDKMRFDLALAASEARQCSDLLSQAQYHVARARKQDEEERE
LRAKQEQEKELLRQKLLKEQEEKRLREKEEQKKLLEQRAQYVEKTKNILMFTGETEATKE
KKRGGGGGRRSKKGGEFDEFVNDDTDDDLPISKKKKRRKGSGSEQEGEEEEGGERKKKRR
RRPPKGEEGSDDEETENGPKPKKRRPPRAEKKKAPKPERLPPSMKGKIKSKAIISSSDDS
SDEDKLKIADEGHPRNSNSDSDDDERPNRRASSESDSDDNQNKSGSEAGSPRRPGRQESD
EDSDSDQPSRKRRRSGSEQSDNESAQSGRSPSGGSENENDSRPVSPSAESDHESEQGSDN
EGSGQGSGNESEPEGSNNEASDRGSEHGSDDSD
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggggctccatcgagattcccctccgggatactgacgaggtcattgaacttgac
ttcgatcagttaccggagggagatgaagttatcagtattctgaagcaggaacacacacaa
ctgcacatatggattgctttggcgctggagtactacaagcaaggaaaaacagaagaattt
gtgaaactgctggaggcagcacggatagatggcaatttggactatcgagatcatgagaaa
gaccagatgacttgcttggatacattggcagcctactatgtacaacaggctcgaaaagaa
aagaacaaagacaataagaaggaccttattacacaagcaactttgttgtatacaatggct
gataaaattattatgtatgatcagaaccatttgttgggaagagcctgcttctgcctgctt
gaaggtgacaaaatggatcaagctgacgcacagtttcattttgtacttaaccagtctcca
aacaatattccagcccttcttgggaaagcttgtatttcattcaacaagaaggattacaga
ggagctcttgcctactataaaaaagcactgcgcactaacccaggatgtccagctgaagtt
cgtttaggaatgggccattgctttgtcaaacttaacaaactggaaaaagctcgactagca
ttcagcagagccctggaactcaactctaagtgtgtgggagcactggttggactggctgtt
ctagaactcaacaataaagaggctgattccatcaaaaatggtgtgcagcttctttccaga
gcctatactattgatcctagcaaccctatggtactgaaccatctggcaaaccactttttc
ttcaaaaaggattacagtaaagtgcagcacctggctctccacgcattccacaacacagag
gtggaggctatgcaggcggaaagctgttaccagctggctcgctccttccatgttcaggaa
gattatgaccaggcctttcagtactactatcaagccacacagtttgcgtcatcttccttt
gtcctaccattttttggtttgggacaaatgtatatttatcgaggtgacaaagagaatgca
tctcagtgctttgagaaagttttgaaagcttatccgaacaattatgaaactatgaaaatc
cttggctctctctatgctgcttcagaagatcaggagaaacgagacatagccaagggccat
ttgaagaaggtcacagaacagtatcctgatgacgtggaagcttggattgagttggcccag
atcttagaacagactgacatacagggtgccctttcagcctatggaacagctacacgcatc
ctgcaggagaaagtgcaggccgatgtccctcctgagattttgaataatgttggggccctc
cattttagacttggaaacctaggtgaagcaaagaaatacttcctggcctcactggaccgc
gcaaaggccgaggccgagcatgatgagcactattacaatgccatctctgttaccacatcc
tacaatttagccaggctctacgaggccatgtgtgaatttcatgaagcagagaaactgtac
aaaaacattttacgagagcatcctaactacgttgactgctatctgcgcctaggagccatg
gctagagataaaggaaacttctatgaagcttcagattggtttaaggaggcccttcagatc
aatcaggatcatccggatgcctggtctttgattggtaacctccatctggcaaagcaagaa
tggggcccaggtcagaagaagtttgagaggatattaaaacagccagccacacagagtgac
acctactctatgctggcccttggcaatgtgtggctccagactttgcatcagccaacccga
gaccgagaaaaggaaaagcgccatcaagaccgtgccctggccatctacaagcaagtcctc
agaaatgatgccaagaacctgtatgctgctaatggcataggagctgtcttggcccacaaa
ggatacttccgtgaagctcgtgatgtattcgcccaagtgagagaagcaacagcagatatc
agtgatgtgtggctgaatctagcacacatctacgtggagcagaagcagtatatcagcgct
gttcagatgtatgagaactgcctcagaaagttctataagcaccaaaacactgaagttgtc
ctctacctggcccgtgccctcttcaagtgtggcaagttgcaggagtgcaagcaaactctg
ctgaaggccagacacgtggcacccagtgatacagttctgatgtttaatgtggccttggtc
ttgcaaagattagctacctctgtcctgaaagatgaaaaaagtaatctgaaggaagtcctt
aatgctgtgaaagagctggagcttgcacacagatacttcagttacttgagtaaagttgga
gataaaatgagatttgatttggcccttgctgcttctgaagccaggcagtgctccgatttg
ctgagccaggcccagtaccatgtggcccgggcgcgcaagcaggatgaggaagaacgggag
cttcgggccaagcaggagcaggagaaggagctcttaagacagaagcttctcaaagaacag
gaagagaaacgtctcagagaaaaggaagagcaaaagaaacttttggaacagcgggcccag
tatgtggagaagaccaaaaatatcctcatgttcactggcgagactgaagctacaaaggag
aagaaaagaggtggaggtggagggcggcgttccaagaaaggaggcgagtttgatgagttt
gtcaacgacgacactgatgacgacctccctatatccaaaaagaagaagagaaggaagggc
agtggtagtgaacaggaaggcgaagaggaggaaggtggagagaggaagaagaagcggagg
agaagacctccaaagggagaagaaggatctgatgatgaagaaacagaaaatggccccaaa
ccaaagaagcgccgtccaccaagagcagagaagaagaaggctcccaagccagaacgcctg
cctccttcaatgaagggaaaaataaaatccaaagccattatatcatcaagtgatgattct
tcagatgaggataaactgaaaattgctgatgaaggacatcccaggaatagcaacagtgat
tctgacgatgacgagaggcccaacagacgcgcctcatccgagagcgattcagatgacaac
cagaacaagtctggcagcgaggcaggcagccctcggaggccgggtagacaggagtcggat
gaggattccgacagtgaccagccgtccagaaagagaaggcgctccggctctgagcagtcg
gacaatgagtctgcacagtccgggagaagcccctccggaggttccgagaatgagaacgat
tctcgccctgtttctccaagtgcagagtcggaccacgaatcagagcagggctctgacaat
gagggttctggccaaggctctggaaatgaatcagaaccagagggctcaaacaatgaagcc
tcagaccgaggctcagaacatggatcagatgatagcgactag
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