Arvicanthis niloticus (African grass rat): 117710582
Help
Entry
117710582 CDS
T08817
Symbol
Thoc6
Name
(RefSeq) THO complex subunit 6 homolog
KO
K13175
THO complex subunit 6
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117710582 (Thoc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
anu03019
]
117710582 (Thoc6)
03041 Spliceosome [BR:
anu03041
]
117710582 (Thoc6)
Messenger RNA biogenesis [BR:
anu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
117710582 (Thoc6)
Spliceosome [BR:
anu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
117710582 (Thoc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
WD40_Prp19
WDR55
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_EML_2
NBCH_WD40
WDR54
Beta-prop_CAF1B_HIR1
Beta-prop_IFT122_1st
Beta-prop_IP5PC_F
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_EIPR1
Beta-prop_WDR75_1st
Beta-prop_SPT8
Beta-prop_RIG_2nd
Beta-prop_DCAF4
Beta-prop_SCAP
Phage_zn_bind_6
Motif
Other DBs
NCBI-GeneID:
117710582
NCBI-ProteinID:
XP_034361454
LinkDB
All DBs
Position
6:92022972..92027684
Genome browser
AA seq
341 aa
AA seq
DB search
MEHAAPLAVPLGQAEVFQALQRLHMTIFSQSVSPCGKFLAAGNNYGQIAIFSLSAALSSE
AKEESKKPVVIFHAHDGPVYSMVSTDRHLLSAADGEVKGWLWAEILKKGCKELWRRQPPY
RTSLEVPEINAMLLVPKENSLILAGGDCQLHTMDLETGTFTRALRGHTDYIHCLALRERS
PEVLSGGEDGAVRLWDLRIAKEVQTIEVYKHEECSRPHNGRWIGCLATDSDWMVCGGGPA
LTLWHLRSSTPTTIFPIRAPQKHVTFYQDLILSAGQGCCVNHWQLSGELKAQVPGSSPGL
LSLSLNQQPAAPECKVLTASGNSCRVDVFTNLGYRAFSLSF
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggagcatgccgcaccgctcgcggtgcctctgggtcaggctgaggtatttcaggccctg
cagcgactgcacatgaccatcttttcccagagtgtctcgccctgcgggaagtttctggca
gctggcaacaattatgggcagattgccatcttcagtctgtctgctgccttaagttcggag
gccaaagaagaaagcaaaaaacccgtggtgattttccacgcccatgacgggcctgtctac
agcatggtctccacagatcgacatctgctcagtgctgcagacggagaggttaagggctgg
ctttgggcagaaatcctcaagaagggctgtaaggaactgtggcgacgccagcctccatac
aggaccagtctggaagtacctgaaatcaatgccatgctgcttgtccccaaggagaattca
ctcattctggctgggggagattgtcagctgcacactatggatctggaaactgggaccttc
acacgggccctccggggccacacagactacatccattgcctggcactgagggaacgcagc
cctgaggtattgtccggtggtgaggatggagctgtacggctttgggatctccgtatagcc
aaagaggtccagaccatcgaagtctacaagcacgaggagtgctcaaggccccacaatggg
cgctggattgggtgcttggcaactgactcagactggatggtctgtggagggggcccagcc
ctcaccctctggcacctcaggtcttccacacccactaccatctttcccattcgagcacca
cagaagcatgtcaccttctaccaggacctgatcctgtctgctggccagggctgttgtgtc
aatcactggcaactgagtggggagctaaaggcccaggtgcctggctcctccccagggctg
ctcagcctgagcctcaaccagcagccagcagccccggagtgcaaggtcctgactgcatca
ggcaacagctgtcgagttgatgtctttaccaacctgggctaccgagccttctccttgtcc
ttctga
DBGET
integrated database retrieval system
