Arvicanthis niloticus (African grass rat): 117710623
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Entry
117710623 CDS
T08817
Symbol
Wipi1
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 1
KO
K17908
autophagy-related protein 18
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04136
Autophagy - other
anu04140
Autophagy - animal
anu05010
Alzheimer disease
anu05014
Amyotrophic lateral sclerosis
anu05016
Huntington disease
anu05017
Spinocerebellar ataxia
anu05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117710623 (Wipi1)
04136 Autophagy - other
117710623 (Wipi1)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
117710623 (Wipi1)
05014 Amyotrophic lateral sclerosis
117710623 (Wipi1)
05016 Huntington disease
117710623 (Wipi1)
05017 Spinocerebellar ataxia
117710623 (Wipi1)
05022 Pathways of neurodegeneration - multiple diseases
117710623 (Wipi1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
anu04131
]
117710623 (Wipi1)
03029 Mitochondrial biogenesis [BR:
anu03029
]
117710623 (Wipi1)
Membrane trafficking [BR:
anu04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
117710623 (Wipi1)
Mitochondrial biogenesis [BR:
anu03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
117710623 (Wipi1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Prp19
WD40
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_NWD2_C
Beta-prop_WDR19_1st
WDR55
Beta-prop_HPS5
ANAPC4_WD40
Beta-prop_Vps41
Beta-prop_VPS8
Beta-prop_WDR35_TULP_N
EIF3I
Beta-prop_EML
DUF5711
Beta-prop_RSE1_2nd
Beta-prop_IFT140_1st
BCAS3_WD40
Beta-prop_WDR19_2nd
Big_2
Motif
Other DBs
NCBI-GeneID:
117710623
NCBI-ProteinID:
XP_034361551
LinkDB
All DBs
Position
6:12873262..12910674
Genome browser
AA seq
446 aa
AA seq
DB search
MEAEAVDTPPGRVEAALSCFSFNQDCTSLAIGTKAGYKLFSLSSVEQLDQVHGSNEIPDV
YIVERLFSSSLVVVVSHTKPRQMNVYHFKKGTEICNYSYSSNILSIRLNRQRLLVCLEES
IYIHNIKDMKLLKTLLDIPSNPTGLCALSINHSNSYLAYPGSQSTGEIVLYDGNSLKMVC
TIAAHEGTLAAITFNSSGSKLASASEKGTVIRVFSVPDGQKLYEFRRGMKRYVTISSLVF
SMDSQFLCASSNTETVHIFKLEHLTDSRPEEPSTWSGYMGKMFMAATNYLPAQVSDMMNQ
DRAFATGRLNFSGQKNICTLSTIQKLPRLLVASSDGHLYIYNLDPQDGGECVLIKTHSLL
SSGTTEENKENDLRPSLPPSYAATVARPSASAASTVPGYSEDGGALRGEVIPEHEFATGP
VCLDDENEFPPIILCRGSQKNKTKQS
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgaagccgtagatacccctccgggccgagtggaggcggcgctcagctgcttc
tctttcaaccaagactgcacatccctggcgattggaaccaaggccggttataagctgttt
tctctgagttctgtggagcaacttgatcaagtccatggaagcaatgaaatccctgacgtg
tacattgtggagcgcctcttctccagcagcctggttgtggtggtcagtcacacaaaacct
cggcagatgaacgtgtaccacttcaagaaaggcactgagatctgtaattacagctactcc
agcaacattctgtctattcggctgaaccgacagaggctgctggtctgcctggaagaatcc
atctatatccacaacattaaggatatgaaactattgaagaccctcctggatatcccctca
aacccaacaggtctctgtgccctctctatcaaccattccaactcttacctggcctatcct
ggaagccagagtacaggcgaaattgttctctatgatggaaactccctgaaaatggtgtgc
accattgctgcccacgagggaactctggctgccatcaccttcaactcctcgggctccaaa
ctagcaagtgcatctgaaaaaggcactgtcatccgagtgttctctgttcctgatgggcaa
aaactctatgagtttcgtcgaggaatgaaaaggtatgtgacaatcagctctctggtgttc
agtatggactcacagttcctgtgtgcttccagcaacacggagaccgtgcacatcttcaaa
ttggaacacctgactgacagtcgcccagaagagccttccacctggagcggctacatggga
aagatgttcatggcagctaccaactacctccccgcccaggtgtcggacatgatgaaccag
gacagggcttttgccacaggacgtctgaacttctctgggcagaagaacatttgcaccctg
tccacgatccagaaactgccgcggctgctagtggcctcctccgacggacacctttacatc
tacaacttggaccctcaggatggaggagaatgcgtcttaatcaaaacccacagcttgctt
agctcaggaacaacagaagagaacaaagaaaatgacctcagaccttccttacctccatct
tacgccgcaactgtagcaaggcccagcgcatccgcagcctccacggtaccaggatactct
gaggacggtggggcgctccgaggagaagttattccggaacatgagtttgcaacgggacca
gtgtgtcttgacgatgagaatgagtttccccctataatcttgtgccgtggaagtcagaag
aacaaaacgaagcagtcctga
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