Arvicanthis niloticus (African grass rat): 117710632
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Entry
117710632 CDS
T08817
Name
(RefSeq) ATP-binding cassette sub-family A member 8-A
KO
K05650
ATP-binding cassette, subfamily A (ABC1), member 8
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
117710632
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
anu02000
]
117710632
Transporters [BR:
anu02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
117710632
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
RsgA_GTPase
AAA_29
SMC_N
AAA_23
MMR_HSR1
DUF2116
nSTAND_NTPase5
Rad17
URGCP_GTPase
nSTAND1
Motif
Other DBs
NCBI-GeneID:
117710632
NCBI-ProteinID:
XP_034361561
LinkDB
All DBs
Position
6:12319944..12390633
Genome browser
AA seq
1618 aa
AA seq
DB search
MVKREINLCQQTCALLCKNLLRKKRLKRDTFLEILYTALILLSLTLFMELHEVHDFSSLP
DVDLGRIDSFNDSTFKIAYTPVTPTIQRIMDKVSLVSYMTGRTILAFPNEENMTELISER
YDDVVRVIFTNAYSYHLKFMKGTRIPIIRELQDHTAHCYSYGDTISCDVSSFWTDGFVAL
QAAINAAIIEVTTNHSVMEEMMSLTAKYIKIDPFVGQEGTTTDYFLLFCIICFSPLTYYI
SAGVTRERKKMKGLMTVMGLRDSAFWLSWGLLYGVIVFIVSLLLTYIVKLVQFVFSTGFM
VIFSLFFFYGLSLISLSFLMSVLLKKTFLTDLVVFFLTISCGSLGFTALYRYLPVSLEWL
LSLLSPFAFMLGMAQVLHLDYDVNSNADPMGNPNEVIGTIFMLLFDGVFYLMLTFYFEKV
LPSEYGRRYPPLFFLKSSFWSGQNSVDLPPLDSNIDYEFSDDCFEPVSTEFHGKEAIRIR
NLTKDYIQKSKCTEALKDLTLDVYKGQITAILGHSGAGKSTLLNILSGLCVPTKGWVTIH
NNKVSEMTDLESISKLTGVCPQCNVQFDFLTVRENLRLFAKIKGIQAHEVDNEVQRVLLE
LEMKNIQDILVQNLSGGQKRKLTFGITILGDPQVFLLDEPTAGLDPFSRHRVWNLLKERK
ADRVVLFSTQFMDEADILADRKVFISKGKLKCAGSSLFLKKKWGIGYHLSLQLSEACVRE
RITSLVKQHIPDSKLSAESEGKLSYILPLERTNKFPDLYRDLERCPDLGIENYGVSITTL
TEVFLKLEGKSVIDQSDIGVTEDIQAGGARSPGRLADVEQLVSLLNEMSKTKVGMALWWQ
QLCAVTRLRFLKLKSERKSIAILILILGIGLLHIMSANIHRIVHQSDYCWELAPHMYFLT
PGQQPQMPLTNLLIVNKTGAKIDDFIHSLEQQNIALEVDAFGTRNGTEDSQYNGAIILSG
GEKNYNFTLACNTKRLNCFPVLVDIVSNALLGLFAPSAHIQTDRSTFPEDNGHRNFDYMV
YFFSWIFLMACVPPYISMTSIDDYKNRAQFQLWISGLSPSAYWFGQALFEVPVYCALIFS
MYIAFYASAPPESVFTAGDLFIQILYVGGYAMSIIFMMYVISFIYRKGRKNSGIWSLCFY
IVSFFSTCFMLIDFYRDTSLFCLIALIPPATLGGCTLLHFENRQYSEIVSEGREYSYLFY
LAPFLHFVIFLVILQCLERKFGMKTMRMDPIFRISSRSDHVFNNPEEPEGEDEDVSLERV
WTSNALTSADFQEKPAIIASCLRKEYKGKKKCFVLKSKKKIATRNISFCVRKGEVVGLLG
HNGAGKSTSIKMITGETKPSAGQVLLKGDSTGGTPGFLGYCPQENALWHNLTVREHLEIF
AAIKGMRKSDANMAIARLADALKLQDQLKSPVKTLSEGVKRKLCFVLSILGNPSVVLLDE
PSTGMDPEGQQQMWQAIQATFANTERGALLTTHYMAEAEAVCDRVAIMVSGRLRCIGSIQ
HLKGKFGKEYLLEMKVKTPMQVEPLNMEIMRLFPQAARQERYSSLMVYKLPREDVQPLSQ
AFFKLETVKQSFDLEEYSLSQSTLEQVFLELSKEQELDGFEEELDPSMKWKLLPQEEA
NT seq
4857 nt
NT seq
+upstream
nt +downstream
nt
atggttaagagagagataaatctgtgccaacaaacgtgtgccttattgtgcaagaatctt
ctcagaaaaaagagactgaaaagagacacatttttggaaatcctgtacacagcacttatc
ctacttagtttaactttatttatggaattgcatgaagttcatgatttttcatcactgcct
gatgtggacctgggacgcattgattcatttaatgactccacctttaagattgcatacaca
cctgtcaccccaacaattcagaggataatggataaagtctctttggtctcttacatgaca
ggaagaacaatattggcttttccaaacgaagaaaatatgacagaactcatttcagaacgt
tacgatgacgtagtgagggtcatattcaccaatgcttactcctaccatttgaagttcatg
aaaggaacaaggatcccaatcataagggaacttcaggaccacacagctcattgttattca
tatggagataccatttcttgtgatgtttcaagcttctggacagatgggtttgtggctctt
caagctgccatcaacgctgccatcatagaagtcacaacaaatcactcagtgatggaagag
atgatgtcacttactgcaaaatacatcaagatagatccttttgttgggcaagagggaaca
acaacggactacttccttttgttctgtatcatttgtttctccccacttacctactatatc
tcagctggtgttacaagagaaaggaaaaagatgaagggcttgatgacagtgatgggcctc
cgggattccgcattctggctgtcctggggcttgctctatggtgtcattgtcttcattgtg
agccttctcttgacatatattgtaaaactagtccaatttgtcttttcaactggatttatg
gtgatcttcagtctctttttcttctatggcttatctctgatatctttgtctttcttgatg
agtgtcttactaaagaagactttcctcactgacttggtggtcttctttctcactatttcc
tgcggaagtcttggatttacagcattgtacagataccttcctgtatccctggagtggctt
ctaagtttgctcagcccctttgcctttatgcttggaatggcccaggtcttacacttggat
tatgatgtgaattcaaatgcagaccccatgggaaacccaaatgaggtcattggcacaatc
ttcatgctgttatttgatggtgtcttctacctgatgttgacattctactttgaaaaggtt
ttaccaagtgaatatggacgtcggtacccacccttgtttttcctgaagtcctcattttgg
tcaggacaaaattcagtggatctcccgccccttgacagtaacatagactatgagttttct
gatgactgttttgaaccagtgtctacagaattccatgggaaagaagccatcagaatcaga
aatcttacaaaagattacatacaaaagtctaagtgcacagaagctttgaaagatctgaca
ttggatgtatataaaggccagattactgcaatccttggtcacagtggagctgggaaatca
acactattaaatatccttagtgggttgtgtgttcccaccaaaggttgggtcactatccat
aataacaaagtctcagaaatgactgacttggaaagtatcagcaagctcactggagtttgt
ccacaatgcaatgtgcaatttgacttcctcactgtaagagaaaatcttaggctatttgct
aaaataaaagggattcaagcacacgaagtggataatgaggtacaaagagttctgctggaa
ttggagatgaaaaatattcaggacatccttgttcaaaacctaagtggtggacagaagaga
aagctgacatttggaatcaccattttaggagaccctcaggttttcctactggatgagccc
actgctgggctggatcccttttcaaggcaccgggtgtggaatctcctgaaggagcgcaaa
gcagaccgtgtggtcctcttcagcacacagttcatggatgaggctgacatcctggctgat
aggaaagtgttcatctccaaggggaagctgaagtgtgccggctcttccttgtttctgaag
aagaaatgggggattggttatcacttaagcttgcagctgagtgaagcgtgtgtgcgtgag
agaataacatctcttgtcaagcagcacatccctgattccaagttgtcagcagaaagtgaa
ggaaaactcagttacatattacccctggagagaaccaacaagtttccagatctttatagg
gatctggaaagatgcccagacctgggaattgagaactatggtgtttctataacaacgctg
actgaggtctttctgaaactggaaggaaaatcagtgatcgaccagtcagatattggtgtg
acagaagacatacaagctggaggggcaaggagcccagggagacttgctgatgtggaacaa
cttgtctctttgcttaatgagatgagtaagacaaaggtgggcatggctctttggtggcag
caactctgtgcagtgaccaggcttcgcttcttgaagttaaaatctgaaaggaaatccatt
gctattctgattctgattttggggattggacttctgcatattatgtcagcaaatattcac
aggatagtccatcaaagtgactactgttgggagcttgctcctcatatgtacttcctcaca
cctggccaacaaccacagatgcccctcacaaacttactgattgtcaacaaaacaggagca
aagatcgatgacttcatacattcactagagcaacagaacatagctttggaagtggatgct
tttgggactagaaatggcacagaggacagtcagtataatggagccatcatcctatcaggt
ggtgagaagaattacaactttacattggcatgcaataccaagagactgaattgttttcca
gttcttgtggatatcgtgagtaatgcgctccttggactgttcgcaccatcagcacacatt
caaactgaccgcagcacattccctgaggataatggccacagaaattttgattatatggtc
tacttcttctcgtggatctttttgatggcctgtgttcctccttatatttccatgaccagc
attgatgactataagaacagagctcagttccagctgtggatttcaggactctccccatct
gcatattggttcgggcaggctctgtttgaggttccagtctactgtgcactcattttttct
atgtacattgcattctatgcctcagcccctccagagagtgtgttcacagctggagatcta
tttattcagattctctatgttggtggctatgccatgtcaattatttttatgatgtatgtg
atttccttcatttatcgcaaggggagaaaaaatagtggcatttggtcactttgcttctat
attgtctctttcttctctacctgttttatgcttattgatttctatagagatacttcacta
ttttgtcttattgccctgatcccacctgctacactgggaggatgcacattattacatttt
gagaatcgtcaatattctgaaatagtttctgaaggaagggaatattcttatctgttttac
ctagctccttttcttcattttgtcatcttcctagttattcttcaatgtctggaaagaaag
tttggaatgaaaacaatgagaatggatcccatctttagaatttcttctagaagcgatcat
gtatttaacaatccagaagaaccagagggggaagatgaagatgtgagtctggaaagagtg
tggacatcaaatgctttgacttctgctgacttccaggagaagccagccatcattgccagc
tgccttcgcaaggagtacaagggaaagaagaaatgcttcgttcttaagagcaagaagaag
atagccacaagaaacatctctttctgtgttcgaaaaggtgaggttgtaggattactggga
cataatggagctggtaaaagtacatccattaagatgataactggagaaaccaagccaagt
gctggacaggtgctgctgaagggggacagcacagggggcacccctgggttcctggggtac
tgtcctcaggaaaacgctttgtggcacaacctgacggtgagggaacacctggagatattt
gcagccataaaggggatgaggaaaagtgatgctaacatggcaattgcaaggttggcagat
gcactcaagctgcaggaccagctgaagtctcctgtgaagacactgtctgagggagtgaag
agaaagctgtgctttgtgctgagcatcctggggaacccttccgtggtgcttctagatgag
ccatccaccggaatggaccctgaggggcagcagcaaatgtggcaggcgatccaggccacc
tttgcaaacacagaaaggggtgctctcctgaccacccattacatggcagaggcagaggct
gtgtgcgaccgtgtggccatcatggtatctgggaggctgagatgtattggatccattcaa
catctaaagggaaaatttggcaaagaatatctcctggagatgaaggtgaagactccaatg
caggtggagcccctcaacatggagatcatgaggcttttcccccaggctgctcgacaggaa
aggtactcttctctgatggtctataaactgcccagagaagatgtgcaacctttatcacaa
gcattcttcaaattagagacagttaaacagagctttgacctggaggagtacagtctctca
cagtccaccctggagcaggtcttcctggaactctccaaggaacaggagctggatggtttt
gaagaggaacttgatccctcaatgaagtggaagctcctcccacaggaagaggcttaa
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integrated database retrieval system
