Arvicanthis niloticus (African grass rat): 117710758
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Entry
117710758 CDS
T08817
Name
(RefSeq) ATP-binding cassette sub-family A member 8-B isoform X1
KO
K05650
ATP-binding cassette, subfamily A (ABC1), member 8
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
117710758
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
anu02000
]
117710758
Transporters [BR:
anu02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
117710758
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
RsgA_GTPase
AAA_15
SMC_N
AAA_29
AAA_23
MMR_HSR1
URGCP_GTPase
Dynamin_N
Motif
Other DBs
NCBI-GeneID:
117710758
NCBI-ProteinID:
XP_034361828
LinkDB
All DBs
Position
6:12507935..12560263
Genome browser
AA seq
1620 aa
AA seq
DB search
MIKREISVRQQTCALLKKNLLKKWRLRRETLMEWVSSLLLLLFLYWYPHGHEATDFSSVP
TKDLGRVDSFRQSGFTIGYMPVTNMTQQIMEKVAAVPFMAGRKVLGLLDEEHIRELTESH
AEIIRVTFSDTFSYHLKFQFGQRIPTSREFGDHEAHCERLFDDVDCRISMFWEEGFVALQ
AAINGAIIETTTNHSVMEELLSVWGKYMKIHPFVSQGGILTDFFIFTCIISFSPIVYYVS
INVTRERKRMKGLMMMMGLQDPAFWLSWGLLYAGFVFIMALSLTLVIKYVQFLILTSFMV
VFSLFLLYGLSMIALAFLMSILVRKSVLTGLTVFLLTIFWGSLGFTALYRYLPAPLEWTF
SLFSPFAFTLGMAQLLRVDHDLNSNVPPDPDGGSNLIIATDFMLAIDAFLYLALMMYFEK
VLPNEYGHQHSPLFFLKSSFWLRPQKPAHVILEDGIDSDPSSDGSFEPVSPEFHGKESIR
IRNISKEYKGKPNKIEALKDLTLDIYEGQITAILGHSGAGKSTLLNILSGLSVPTKGSVT
IYSNKLSEMADLEKVFRIAGVCPQSNVQFDFLTVRENLRLFAKIRGIPPQDVEKQVQRVL
LELDIKNIQDILAQNLSGGQKRKLTFGIAILGDSQIFLLDEPTAGLDPFSRHRVWSLLKE
RKADRVVLFSTQFMDEADILADRKVFISKGKLKCAGSSLFLKKKWGIGYHLSLQLKEVCV
PENITSLVIQHIPEAKLSAEGEGKLVYTLPLETTCRFPELCQSLDSCPGLGIENYGVSMT
TLNEVFLKLEGKAAIDEPEVDIVGEGQTERSGDTERLMEMEQTLSSLTEMKKKMGGMALW
RQQTCAIAKVRLLKLKHERKTLLSVLLILAVGICPLLFENITMKILQSTYTWELSPHEYF
LAPGQQPQGMLTQLLIVNKTEASIDDFIHSVERQNIALEVDASGARDGTDDPAYNGAIIV
SGNEKNHSFSFACNTKRLNCFPVLMDILSNGLLGMVKPSARVRTDRSTYFVNKISMPLEN
LEKTAFWLILTSACPPYIAMSSVTDYKNKAWFQLRVSGLFPSAYWFGQALVDISLYCFVF
LFMSLMDYLLRFPDETLSILSHAIQIPCSVGYAISLIFLTYVISFISRKGKKNSGIWSLS
FYIITMFSVLAMLLDFNGGAILYCIIFLIPSSTLVGCLILSMHLIIYQVFEEGPLIEPFL
VFLIPFLHVFIFIFTLRCLEWKFGKKTMRKDPIFRISPRNNDVYQNPEEPDNEDEDVQME
RMRTANALVSTSFDEKPVIVASCLRKEYAGKRKHCLSKKKAKIATRNVSFCVRKGEILGL
LGHNGAGKSTSLKMISGDTKFTAGQVLLKGSGEGDTLEFLGYCPQENALWPNLTVREHLE
VFAAVKGLSRSHATIAITRLVDALKLQDQLKSPVKTLSEGVKRKLCFVLSILGNPSILLL
DEPSTGLDPEGQQQIWQAIRAIIKNTDRGALLTTHYMAEAEALCDRVAILVSGRLRCIGS
IQHLKSKFGKDYLLEMKVKSLEQVEPLNTEVLRLFPQAARQERYSPLMVYKLPVEDVQPL
SQAFFKLEKVKQTFDLEEYSLSQSTLEQVFLELSKEQELDGFEEELDSSIKWNLLPQEDA
NT seq
4863 nt
NT seq
+upstream
nt +downstream
nt
atgatcaagagagagataagtgtgcgccaacaaacttgtgctttattaaagaagaacctt
cttaagaaatggagactgagaagagagaccttgatggagtgggtgagttcgttgctcctt
ctgcttttcttgtactggtatcctcatggtcatgaagctactgacttttcttcagtgccc
accaaggatctgggacgagtcgattcttttagacaatctggattcacgatagggtacatg
cctgtcaccaacatgacacaacagataatggagaaggtagctgctgtccctttcatggca
ggtagaaaagtcttgggactgttggatgaagaacacatcagggaattaacagaaagtcat
gcggaaataataagagtcactttttctgatacattctcctatcatctgaaattccaattt
ggacagagaatcccaacgtcgagggaatttggagaccatgaagctcattgtgagagactg
tttgacgatgttgactgtcggatatccatgttctgggaggaaggatttgtggctcttcaa
gctgccatcaatggtgccatcatagaaaccacaacaaaccactcggtgatggaggaactg
ctatcagtttgggggaaatacatgaagatccatccttttgtcagtcaaggagggattctg
actgatttcttcattttcacctgcatcatttccttctccccaatcgtctattatgtgtca
atcaatgttacaagagagaggaaaaggatgaagggcttgatgatgatgatgggccttcaa
gatccagcattctggctatcctggggtctactctatgctggctttgtcttcattatggct
ctatccctgacacttgttatcaaatatgtccagtttcttattctgaccagcttcatggtg
gtctttagcctcttcctcctttatggattgtctatgattgccttggccttcctaatgagt
atcttggtgaggaagtctgtcctcactggcctgactgtgttccttctcaccatcttctgg
ggaagcctgggcttcacagccctgtacagatacctccctgcacctttggaatggactttc
agtcttttcagcccctttgccttcacactaggaatggcccagctcttgcgcgtggaccat
gatttaaattctaatgtaccccctgatccagatggtggctcaaatctgattatagcaacc
gatttcatgctggcaattgatgcctttttatatctggccctgatgatgtactttgaaaaa
gttctgccaaatgaatatggacatcagcactctcccctgtttttcctgaaatcctcattt
tggctacgaccacaaaagcctgctcatgtgattcttgaagatggaatagattctgaccct
tcatcagatggctcgtttgaaccagtgtctccagaattccacgggaaagagtctatcaga
atcagaaatatttcaaaagaatacaaaggaaagcccaataaaatagaagccttgaaagac
ctgacgctggacatatatgaaggccaaatcacagcaatacttgggcacagtggagctgga
aaatcaacactgttaaatattcttagtggattatctgttcctactaaaggttccgtcacc
atctatagtaataaattatcagaaatggctgacctagaaaaagtcttcaggattgctgga
gtttgtccacaatccaatgttcaatttgacttccttactgtgagagaaaacctcaggctt
tttgccaaaataagaggaatcccacctcaagacgtggagaaacaggtgcaaagggttttg
ctggaattggatataaaaaatattcaagatatccttgctcaaaacctaagtggcggacag
aagagaaagctaactttcggaatcgccattttaggagattctcagattttcctactggat
gagcccactgctgggctggatcccttttcaaggcaccgggtgtggagtctcctgaaagag
cgcaaagcagaccgtgtggtcctcttcagcacacagttcatggatgaggctgacatcctg
gctgataggaaagtgttcatctccaaggggaagttgaagtgtgcaggctcttccttgttt
ctgaagaagaaatgggggattggttatcacttgagtttgcagctgaaagaagtctgtgtt
ccagaaaacatcacatcacttgttatacagcacatccctgaggccaagctatcagccgaa
ggggaagggaaactggtctatacattacccttagaaacaacctgtagatttccagaactt
tgccagagtcttgacagctgtcctggactgggaattgaaaactatggtgtttccatgaca
actttgaatgaggtgttcctgaagctagaaggaaaagcagcaattgatgagccagaggtt
gacatcgtgggagaaggacaaacagagagatctggggacacagaaaggcttatggagatg
gagcagactctctcttcacttacagaaatgaagaagaagatggggggtatggctctctgg
agacagcaaacctgtgcgattgcaaaggttcgcctgttgaagttaaagcacgaaaggaaa
acactcttatctgtgctcttgattctggcagttggcatctgccctcttctttttgaaaat
atcacgatgaaaatacttcaaagcacttacacttgggaactttccccacatgagtacttc
cttgctcctggacaacagccccagggcatgctcactcagttactgatcgtcaataagaca
gaggcaagcattgacgactttatccattctgtggagcgccagaacatagctttggaagta
gatgcttctggagccagagatggcacagatgacccagcctacaatggagccattatcgtg
tctggcaatgagaagaaccacagcttttcgtttgcatgcaataccaagagactgaactgt
ttcccagttctgatggacatccttagcaatgggctgcttggaatggttaaaccgtcagcc
cgagtccgaaccgacagaagcacttattttgtgaacaaaattagtatgcctttagaaaac
ctggagaagactgcattctggctgattttgacctccgcttgccctccttatattgccatg
agcagtgtcacagactataagaacaaagcctggttccagctgcgggtctctggcctcttc
ccttcggcttactggttcgggcaagcactggtggacatttccctgtactgctttgtcttc
ctcttcatgtccttaatggactaccttttacgcttcccagatgagacgctttctatttta
agtcatgccatacaaatcccatgttctgttggctatgccatatccctgatcttcttaaca
tacgtgatttcattcatttctcgaaaggggaaaaaaaacagcggcatttggtcacttagc
ttctatattatcaccatgttctcagtgcttgcaatgttgctggatttcaatgggggtgct
atactgtattgcatcatctttttaataccatcatccactctggttggatgtttgatctta
tctatgcatcttatcatatatcaagtctttgaagaaggaccacttatagagccattcctg
gtattcctcattcctttccttcatgttttcatttttatttttacccttcgatgtctggaa
tggaagtttggaaagaaaaccatgaggaaggatcccatctttagaatttctccaagaaac
aatgatgtgtatcaaaacccagaagagccagataatgaggatgaagatgttcaaatggag
agaatgagaacagcaaatgccttggtatccaccagttttgatgagaaaccagtcattgtt
gccagctgcctacgaaaagaatatgcagggaagaggaaacattgcctttccaagaagaag
gctaagatagccaccagaaatgtctcgttctgtgtcaggaaaggtgagattctaggattg
ttgggacacaatggagctggcaaaagtacatctcttaaaatgataagtggagacacaaag
ttcacagctgggcaggtgctactgaaagggagtggtgaaggggacaccttagagttcctg
gggtactgtcctcaggagaacgctctgtggcccaacctcactgtgagggaacacctggag
gtatttgctgcagtgaagggcctgagcagaagtcatgctaccatcgccatcacaaggttg
gtggatgcgctcaagctgcaggaccagctgaagtctcctgtgaagacgctctcagaggga
gtgaagagaaagctgtgctttgtgctgagcatactggggaacccatctatattgcttctg
gatgagccatccaccgggctggatcctgaggggcagcagcaaatatggcaagcaatcagg
gccatcataaaaaatacagacaggggcgccctgctgaccacccattacatggcagaggcc
gaggctctgtgtgaccgagtggccatcctggtgtctggaaggctgaggtgtattggatcc
atccaacatctcaaaagcaaatttggcaaagattacctgctggagatgaaggtgaagtct
cttgagcaggtggaaccgctcaacacggaggtgctcagactttttccccaggctgctagg
caggaaaggtactctcctctgatggtttacaagttaccagtggaagatgtgcaaccttta
tcccaagctttcttcaagttagagaaggttaagcagacctttgacctggaggagtacagc
ctctctcagtctaccctggagcaggtgttcttagagctctccaaggagcaggagctggat
ggctttgaggaagaactagattcttccataaagtggaatctcctcccacaagaagatgct
taa
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