KEGG   Arvicanthis niloticus (African grass rat): 117710818
Entry
117710818         CDS       T08817                                 
Symbol
Cacna1b
Name
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B isoform X1
  KO
K04849  voltage-dependent calcium channel N type alpha-1B
Organism
anu  Arvicanthis niloticus (African grass rat)
Pathway
anu04010  MAPK signaling pathway
anu04020  Calcium signaling pathway
anu04721  Synaptic vesicle cycle
anu04723  Retrograde endocannabinoid signaling
anu04725  Cholinergic synapse
anu04726  Serotonergic synapse
anu04727  GABAergic synapse
anu04728  Dopaminergic synapse
anu04930  Type II diabetes mellitus
anu05016  Huntington disease
anu05020  Prion disease
anu05022  Pathways of neurodegeneration - multiple diseases
anu05032  Morphine addiction
anu05033  Nicotine addiction
anu05207  Chemical carcinogenesis - receptor activation
Brite
KEGG Orthology (KO) [BR:anu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    117710818 (Cacna1b)
   04020 Calcium signaling pathway
    117710818 (Cacna1b)
 09150 Organismal Systems
  09156 Nervous system
   04727 GABAergic synapse
    117710818 (Cacna1b)
   04725 Cholinergic synapse
    117710818 (Cacna1b)
   04728 Dopaminergic synapse
    117710818 (Cacna1b)
   04726 Serotonergic synapse
    117710818 (Cacna1b)
   04723 Retrograde endocannabinoid signaling
    117710818 (Cacna1b)
   04721 Synaptic vesicle cycle
    117710818 (Cacna1b)
 09160 Human Diseases
  09161 Cancer: overview
   05207 Chemical carcinogenesis - receptor activation
    117710818 (Cacna1b)
  09164 Neurodegenerative disease
   05016 Huntington disease
    117710818 (Cacna1b)
   05020 Prion disease
    117710818 (Cacna1b)
   05022 Pathways of neurodegeneration - multiple diseases
    117710818 (Cacna1b)
  09165 Substance dependence
   05032 Morphine addiction
    117710818 (Cacna1b)
   05033 Nicotine addiction
    117710818 (Cacna1b)
  09167 Endocrine and metabolic disease
   04930 Type II diabetes mellitus
    117710818 (Cacna1b)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:anu04040]
    117710818 (Cacna1b)
Ion channels [BR:anu04040]
 Voltage-gated cation channels
  Calcium channel, voltage-gated (Cav)
   117710818 (Cacna1b)
SSDB
Motif
Pfam: Ion_trans Ca_chan_IQ GPHH PKD_channel
Other DBs
NCBI-GeneID: 117710818
NCBI-ProteinID: XP_034361947
LinkDB
Position
6:complement(105324147..105498910)
AA seq 2338 aa
MVRFGDELGGRYGGTGGGERARGGGAGGAGGPGQGGLPPGQRVLYKQSIAQRARTMALYN
PIPVKQNCFTVNRSLFVFSEDNVVRKYAKRITEWPPFEYMILATIIANCIVLALEQHLPD
GDKTPMSERLDDTEPYFIGIFCFEAGIKIIALGFVFHKGSYLRNGWNVMDFVVVLTGILA
TAGTDFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAILMFAII
GLEFYMGKFHKACFPNSTDAEPVGDFPCGKDPPARQCEGDTECREYWPGPNFGITNFDNI
LFAILTVFQCITMEGWTDILYNTNDAAGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFA
KERERVENRRAFLKLRRQQQIERELNGYLEWIFKAEEVMLAEEDKNAEERSPLDVLKRAA
TKKSRNDLIHAEEGEDRFVDLCAVGSPFARASLKSGKTESSSYFRRKEKMFRFFIRRMVK
AQSFYWVVLCVVALNTLCVAMVHYNQPQRLTTALYFAEFVFLGLFLTEMSLKMYGLGPRS
YFRSSFNCFDFGVIVGSIFEVVWAAIKPGTSFGISVLRALRLLRIFKVTKYWNSLRNLVV
SLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFQDETPTTNFDTFPAAILTVFQIL
TGEDWNAVMYHGIESQGGVSKGMFSSFYFIVLTLFGNYTLLNVFLAIAVDNLANAQELTK
DEEEMEEAANQKLALQKAKEVAEVSPMSAANISIAARQQNSAKARSVWEQRASQLRLQNL
RASCEALYSEMDPEERLRYASTRHVRPDMKTHMDRPLVVEPGRDGLRGPVGNKSKPECTE
ATESADPPRRHHRHRDRDKTSATAPAGGEQDRTDCPKAESTETGAREERVRPRRSHSKEA
PGADTQARCERSRHHHRRGSPEEATEREPRRHRAHRHAQDTSKEGTAPVLVPKGERRARH
RGPRTGPREAENSEEPARRHRARHKVPPTLEPPEREAAEKESNVVDGDKETRNHQPKEPH
CDLEAIAVTGVGPLHMLPSTCLQKVDEQPEDADNQRNVTRMGSQPSDPSTTVHVPVTLTG
PPGETTVVPSELCALVGNMDLEGQAEGKKEAEAEDVLRRGPRPIVPYSSMFCLSPTNLLR
RFCHYIVTMQYFEMVILVVIALSSIALAAEDPVQTDSFRNNALKYMDYIFTGVFTFEMVI
KMIDLGLLLHPGAYFRDLWNILDFIVVSGALVAFAFSSFMGGSKGKDINTIKSLRVLRVL
RPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVIAVQLFKGKFFYCTDESK
ELERDCRGQYLDYEKEEVEAQPRQWKKYDFHYDNVLWALLTLFTVSTGEGWPMVLKHSVD
ATYEEQGPSPGFRMELSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKVMSECSLEKNE
RACIDFAISAKPLTRYMPQNKQSFQYKTWTFVVSPPFEYFIMAMIALNTVVLMMKFYDAP
YEYELMLKCLNIVFTSMFSMECILKIIAFGVLNYFRDAWNVFDFVTVLGSITDILVTEIA
NNFINLSFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGM
QVFGNIALDDDTSINRHNNFRTFLQALMLLFRSATGEAWHEIMLSCLGNRACDPNANANK
CGSDFAYFYFVSFIFLCSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFIRVWAEYDP
AACGRISYNDMFEMLKHMSPPLGLGKKCPARVAYKRLVRMNMPISNEDMTVHFTSTLMAL
IRTALEIKLAPAGTKQHQCDAELRKEISSVWANLPQKTLDLLVPPHKPDEMTVGKVYAAL
MIFDFYKQNKTTRDQTHPAPGGLSQMGPVSLFHPLKATLEQTQPAVLRGARVFLRQKSAT
SLSNGGAIQTQESGIKESLSWGTQRTQDALYEARAPLERGHSAEIPVGQPGTLAVDVQMQ
NMTLKGPDEEPQPGLESQGRAASMPRLAAETQPAPNASPMKRSISTLAPRPHGTQLCNTV
LDRPPPSQGSHHHHHRCHRRRDKKQRSLEKGPSLSVDTEGAPSTAVGSGLPHGEGSTGCR
RDRKQERGRSQERRQPSSSSSEKQRFYSCDRFGSREPPQPKPSLSSHPTSPTAALEPGPH
PQGSGSVNGSPLMSTSGASTPGRGGRRQLPQTPLTPRPSITYKTANSSPVHFAEGQSGLP
AFSPGRLSRGLSEHNALLQKEPLSQPLAPGSRIGSDPYLGQRLDSEASAHTLPEDTLTFE
EAVATNSGRSSRTSYVSSLTSQSHPLRRVPNGYHCTLGLSTGVRARHSYHHPDQDHWC
NT seq 7017 nt   +upstreamnt  +downstreamnt
atggtccgcttcggggacgagctgggcggccgctatgggggcaccggcggcggggagcgg
gctcggggcggcggggccggcggggcgggtggcccgggccaggggggtctgccgccgggc
cagcgggtcctgtacaagcagtccattgcgcagcgcgcacggaccatggccctgtacaac
cccatcccagtcaagcagaactgcttcaccgtcaaccgttcgctcttcgtcttcagcgag
gacaacgtcgtccgcaaatacgctaagcgtatcaccgaatggccgcccttcgaatacatg
atcctggccaccatcatcgccaactgcattgttctggccctggagcagcacctccctgat
ggggacaagactcccatgtctgaacgactggatgacacggagccttacttcatcgggatc
ttttgcttcgaggcgggcatcaagatcatagccctgggctttgttttccacaagggctcc
tacctacggaatggctggaatgtcatggacttcgtggtggtcctcacggggattctcgcc
acagctggaactgactttgacctgcgcaccctgagggctgtgcgtgtgcttaggcccctg
aagctggtgtctggaattccaagcttgcaggtggtactcaagtccatcatgaaggccatg
gtcccgctgctgcagatcgggctgctgctcttctttgccatcctcatgtttgccatcatc
ggccttgaattctatatgggcaaattccataaggcctgcttccccaacagcacagatgca
gagcccgtgggtgactttccttgtggcaaggacccccctgctcgtcagtgtgagggtgac
accgaatgccgggagtactggccaggacccaactttggcattactaattttgacaacatc
ttgtttgccatcttgacagtgttccagtgtatcaccatggagggctggactgacatcctc
tacaataccaacgatgcggctggcaacacatggaactggctgtacttcattcctctcatc
atcattggctccttcttcatgctcaacctggtgctgggtgtgctttcaggagagtttgcc
aaggagcgagaacgagtggagaaccgccgtgccttcctgaagctccgtcggcagcagcag
attgagcgagaactgaatgggtacttggagtggatcttcaaggcagaggaagtcatgttg
gcagaggaggacaagaatgcagaagagaggtcccctttggatgtgttgaagagagctgcc
accaagaagagccgaaatgacctcatccacgcagaagagggggaggaccggtttgtagac
ctctgtgctgtggggtctccttttgctcgggccagcctcaagagtgggaagacggagagc
tcgtcgtacttccggaggaaagagaagatgttccggttctttatccggcgtatggtgaaa
gcacagagcttctactgggtggtactgtgtgtggtggccctgaacacgctgtgtgtggcc
atggtgcactataatcagcctcagcggctcaccactgcactgtactttgcagagtttgtt
ttcctgggtctctttctcacagagatgtccctgaagatgtatggcctagggcctagaagt
tacttcaggtcttccttcaactgctttgactttggggtgatcgtggggagcatctttgaa
gtcgtctgggctgccatcaagccaggaacctcctttggaatcagtgtgctgcgggctctc
cgattgctgaggatattcaaagtcaccaagtactggaactccctgaggaacctggtggtt
tccctcctcaactccatgaagtccatcatcagccttctcttcctgcttttcctcttcatt
gtggtcttcgccctgttggggatgcagctgtttgggggacagttcaactttcaagatgag
actccaaccactaattttgataccttcccggctgccatcctcactgtctttcagatcctg
acaggagaggactggaatgcagtgatgtatcatgggatcgagtcacaaggtggagtcagc
aaaggcatgttttcttccttttacttcatcgtcctgacactgtttggaaactacaccctg
ctgaacgttttcttggccattgctgtggacaaccttgccaatgcccaggagttgaccaag
gatgaagaggagatggaagaagctgccaatcagaaacttgctcttcagaaggccaaagaa
gtagctgaagtcagtcccatgtctgctgccaacatctccattgctgccaggcagcagaac
tcggccaaggcgcgctcagtatgggagcagcgggccagtcagctaaggctccagaacctg
cgtgccagctgtgaggcactgtacagcgagatggaccctgaggagcgcctgcgttatgcc
agcacgcgccacgtgaggccagacatgaagacacacatggaccgacccctagtggtggag
cctggtcgggatggcttgcggggacccgtcgggaacaagtcaaagcctgaatgcacggag
gccaccgaaagcgcggacccaccacgccggcaccaccggcatcgtgatagggacaagacc
tcagccacagcccctgctggaggcgaacaggacaggacagactgcccaaaggccgaaagc
acggagaccggggcgcgggaggagcgtgtgcgccctcgtcgaagtcacagcaaggaggct
ccaggggctgacacgcaagcgcgctgtgagcgcagtaggcatcaccacaggcgcggatcc
ccagaagaggccactgaacgggagcctcggcgccaccgtgcccaccggcatgcacaggac
acaagcaaggagggcactgcgccggtgcttgtacccaagggcgagagacgcgcaagacat
cgaggcccgcgcacgggtccccgtgaggcggagaacagcgaggaacccgcacgcaggcac
cgtgcaaggcataaggtgccaccaacacttgagcccccagagagggaggctgcagagaag
gagagcaacgtggtggatggggataaggaaacccgaaatcaccagcccaaggaacctcac
tgtgacctggaggccattgcagttacaggtgtgggccctctgcacatgctgcccagcacc
tgtctgcagaaagtggatgaacaaccagaggatgcagacaaccagcgtaatgtcacccgg
atgggcagtcagccctcagaccccagcaccactgtgcatgtcccagtgacactgacaggc
cctcctggggagaccactgtagttcccagtgagctctgtgcccttgtaggtaacatggac
ctggaaggccaagcagagggcaagaaggaggcagaagctgaggatgtgctgagaagaggc
ccccggcccatcgttccctacagctccatgttctgtctcagccccaccaacctgcttcgt
cgcttctgccattacattgtgaccatgcagtactttgagatggtaattctcgtggtcatt
gccttgagcagcattgccctggctgctgaggaccctgtgcagaccgattccttccggaac
aatgctttaaagtacatggattacatctttacaggagtcttcacctttgaaatggtcata
aagatgatagacttgggcctgctgctgcatcctggggcctacttccgggacctgtggaac
attctggacttcattgttgtcagtggagccctagtggcatttgcattctcgagcttcatg
ggaggatccaaagggaaagacatcaataccatcaagtctctgagagtcctgcgtgtcctg
aggcccctcaagaccatcaagcggctgcctaagctcaaggctgtgtttgactgtgtggtg
aactccctgaagaacgtcctgaacatcctgattgtctacatgctcttcatgttcatcttt
gccgtcattgcggtccagctcttcaaagggaagttcttttattgcactgatgaatccaag
gagctggagagggactgccggggtcagtatttggattatgagaaggaagaagtagaagcc
cagccaaggcagtggaagaaatatgacttccactatgacaatgtgctctgggccttgttg
acgctgttcacggtgtccacaggagaggggtggcccatggtgctgaaacactctgtggac
gccacctatgaggagcaggggccaagccccgggtttcggatggagctttccattttctat
gtggtctactttgtggtcttcccttttttctttgtcaacatctttgtggccttgatcatt
atcaccttccaggaacagggggacaaggtgatgtctgaatgcagcctggaaaagaatgag
agggcttgcatcgactttgccatcagcgccaagcccctgacacgctacatgcctcaaaac
aagcagtcgttccagtataagacgtggacatttgtggtctctccaccctttgagtacttc
atcatggccatgatagccctcaacacagtggtgctgatgatgaagttctacgatgcgccc
tatgagtacgagctgatgctgaagtgcctgaacatcgtcttcacgtccatgttctctatg
gaatgcatattgaagatcatcgcctttggggtgctgaactacttcagagatgcctggaat
gtctttgactttgtcaccgttttgggaagtattactgatattttagtaacagagattgcg
aacaacttcatcaatctgagcttcctccgtctcttccgggcagcacggctgatcaagctg
cttcgccagggctacaccattcgcatcctgctctggacgtttgtccagtcctttaaggcg
ctgccctacgtgtgcctcctcatcgccatgctgttctttatctacgccatcatcggcatg
caggtttttggaaacattgcccttgatgatgacaccagtatcaaccgacacaacaacttc
cggacatttctgcaagccttaatgctgttgttcaggagtgccactggggaggcctggcat
gagatcatgctgtcttgtctgggcaaccgggcgtgcgacccaaatgccaacgccaataaa
tgtggaagcgactttgcctatttctattttgtctccttcatcttcctctgttccttcctg
atgttgaacctctttgttgctgtgatcatggacaattttgagtacctcacgcgggactct
tccatcctagggcctcaccacctagatgaattcattcgagtctgggctgaatacgaccca
gctgcgtgtgggcgcatcagttacaatgacatgtttgagatgctgaaacacatgtcccca
cctctggggttggggaagaaatgcccggctcgagttgcatacaagcgcctggttcgcatg
aacatgcccatatccaatgaggacatgacggtacactttacatccaccctgatggccctc
atccggacagcactggagatcaagcttgccccagcgggaacaaagcagcaccagtgtgat
gctgagctgagaaaggagatatcttctgtgtgggctaatctgccccagaagactctggac
ttactggtaccaccccacaaacctgatgagatgacagtggggaaggtatatgcggctctc
atgatatttgacttctacaaacagaacaaaaccaccagagatcagactcacccagctcct
ggaggcctatcgcagatgggtcctgtttctctgttccaccctctgaaggccaccctggag
cagacacagcccgctgtgctccgaggagctcgggttttccttcggcaaaagagtgcaact
tccctcagcaatggaggtgccatacaaactcaggaaagtggcatcaaggagtcgctgtcc
tggggcacgcagaggacccaggatgcactttatgaggccagagcacctctagaacgtggc
cactctgcagagatccctgtggggcagccaggaacactggctgtggatgtccagatgcag
aacatgacattgaaaggacctgatgaggagccccagcctgggctggagagccaaggccga
gcagcctctatgccacgcctggcggcagaaacacagccggccccaaatgccagccccatg
aagcgctccatctccacactggctccacgcccgcatgggacacagctttgcaacacagtc
ctggaccggcctcctcctagccaggggtcacatcaccaccaccaccgctgccaccggcgc
agggacaagaagcaaaggtccctggaaaaggggcccagcctgtctgttgacacagaaggc
gcaccaagcactgctgtaggatctggcctgccccatggagaagggtccacgggctgccgg
cgggaccggaagcaggagcgaggccggtcccaggagcggaggcagccttcgtcctcttct
tcagagaagcagcgcttctattcctgtgaccgctttgggagccgggagcccccacaacct
aagccctccctcagtagccaccccacatcaccaacagcggcactagagccaggaccccac
ccacagggcagtggttccgttaatgggagccccttgatgtcaacatctggtgctagcacc
ccaggccgaggtgggcggaggcagctcccccagactcccctgaccccacgccccagcatt
acctacaagaccgccaattcctcgcctgtccactttgctgagggtcagagtggccttcca
gccttctcccctggccgtctcagccgcggcctttctgaacacaacgccctgctccagaaa
gagcccctgagccagcctctagctcctggctcccgcattggctctgacccttacctaggg
cagcgtctggacagtgaggcctcagcccacaccctgcctgaggatacactcacctttgaa
gaggcagtggccaccaactctggccgttcctccaggacttcctatgtgtcctccctcact
tcccagtctcaccctctccgtcgtgtacccaatggctaccactgcactttgggactcagc
accggcgtccgggctcggcacagctaccaccacccagaccaggatcactggtgctag

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