Arvicanthis niloticus (African grass rat): 117710843
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Entry
117710843 CDS
T08817
Symbol
Abca3
Name
(RefSeq) ATP-binding cassette sub-family A member 3
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
117710843 (Abca3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
anu02000
]
117710843 (Abca3)
Transporters [BR:
anu02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
117710843 (Abca3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_15
RsgA_GTPase
AAA_23
AAA_22
AAA_30
AAA_29
MukB
AAA_27
Motif
Other DBs
NCBI-GeneID:
117710843
NCBI-ProteinID:
XP_034361990
LinkDB
All DBs
Position
6:complement(91187641..91242817)
Genome browser
AA seq
1704 aa
AA seq
DB search
MAVLRQLTLLLWKNYTLKKRKVLVTVLELFLPLLFSGILIWLRLKIQSENVPNATVYPDQ
SIQELPLFFSFPPPGGSWELAYIPAHSDAARTITETVKRELIFKMRVRGFPSEKDFEDYI
RYDNHSSNVLAAVVFEHTFNHSKDPLPLAVKYHLRFSYTRRNYMWTQTGNIFLKETEGWH
TTSLFPLFPSPGPREPSSPDGGEPGYIHEGFLAVQHAVDKAIMHYHANASAHQLFQKLTV
ITKRFPFPPYISDPFLIAIQYQLPLLLMLSFTYTSLTIIRAVVQEKEKKLKEYMRMMGLS
SWLHWSAWFLMFFLFFLIVVSFMTLLFCVKVKKDIAVLSNSDPSLVLVFLLCFAISSISF
SFMVSTFFSKANIAAAVGGFLYFFTYTPYFFVAPRYNWMTLSQKLLSCLLSNVAMAMGAQ
LIGKFEAKGTGVQWRDLLNPVNIDDDFCFGQVLGMLLLDSALYGLVTWYVEAVFPGQFGV
PQPWYFFLMPSYWCGNPRTVVGKEEEGSDPEKALRNEYFEAEPEDLVAGIKIKHLSKVFQ
VGNKDKMGIRDLTLNLYEGQITVLLGHNGAGKTTTMSMLTGLFPPTSGHAYIHGYEISQD
MVQIRKSLGLCPQHDVLFDNLTVAEHLYFYAQLKGLSLQKCPEEVKQMLHILSLEDKRDL
RSKFLSGGMKRKLSIGIALIAGSKVLMLDEPTSGMDAVSRRAIWDLLQQQKSDRTVLLTT
HFMDEADLLGDRIAILAKGELQCCGSSLFLKQKYGAGYHMTLVKEPHCNPEGISQLVHHH
VPNAMLESHAGAELSFILPKESTHRFEGLFAKLEKKQKELGIASFGASVTTMEEVFLRVG
KLVDTSMDIQAIQLPALQYQHERRASDWALDSNLCGVMDPTNGIGTLIEEEEVLVKLNTG
LALHCQQFWAMFLKKAAYSWREWKMVAAQVLVPLTCLTLALLAINYTSELFDAPLLKLSL
NEYGRTVVPFSVPGTSKLSQQLSDHLRDMLQAERQEPREVLGDLEEFLVFRASVEGGGFN
ERCLVATSFQDREERTEVTALFNNQAYHSPATALAIVDNLLFKLLCGPRASIEISNYPQP
RSTLQVAKDQFNEGRKGFDIALNLLIAMAFLASTFTILAVSERAVQAKHVQFVSGVHVAT
FWLSALLWDLISFLVPSLLLLVVFQAFNVHAFTRDGHMADLLLLLMLYGWAIIPLMYLMS
FFFSAASTAYTRVTIFNILSGLATFIVVTIMRIPAVKLEELSRTLDHVFLVLPNHCLGMA
VSNFYENFETRRYCTSSEVAAHYCKKYNIQYQENFYAWSTPGVGKFVTSMAASGGIYLTL
LFLIETNLLWRLRSFICAFRRRWTLAELQNRTSVLPEDQDVAAERSRILVPSLDSLLDTP
LIINELSKVYDQRVPLLAVDRISLAVQKGECFGLLGFNGAGKTTTFKMLTGEETITSGDA
FVGGYSISSDIGKVRQRMGYCPQFDALLDHMTGREMLVMYARLRGIPERLIDACVENTLR
GLLLEPHANKLVKTYSGGNKRKLSTGIALIGEPAVIFLDEPSTGMDPVARRLLWDTVARA
RESGKAIVITSHSMEECEALCTRLAIMVQGQFKCLGSPQHLKSKFGSGYSLQAKVRSEGK
QEVLEEFKAFVDLTFPGSILEDEHQDMVHYHLPGCDLSWAKVFGILEKAKERYGVDDYSV
SQISLEQVFLSFAHLQPPTTEDGR
NT seq
5115 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgctgcggcagctcacgctcctactttggaagaactatactctgaagaaacga
aaggttctagtgacagtcttggagctcttcctgcccctgctgttttctgggatcttgatt
tggcttcgcttaaagatacagtcggagaatgtgcccaacgccaccgtttacccggatcag
tccatccaggagctgcccctgtttttctcattccctccacctggggggagctgggagctt
gcctacatccctgcccacagcgatgctgccaggaccatcacggagacagttaaaagggaa
ctcattttcaagatgagagtacgtggctttccctctgagaaggacttcgaggactacatt
cggtatgacaaccactcctccaacgtgctggcagctgtggtgtttgagcacaccttcaat
cacagcaaggaccccctgccactggcggtgaaataccacctgcgcttcagttacactcga
agaaattacatgtggacccaaacaggaaatattttcctgaaagagacagaaggctggcat
accacttcgctttttccgcttttcccaagcccaggaccaagggaaccttcatcacctgat
ggtggtgaaccggggtacatccacgaaggcttcctggctgtgcaacacgctgtagacaaa
gctatcatgcattaccatgccaacgcctctgcacaccagctgttccagaagctcacggtg
atcaccaaaaggttcccgttcccaccatacatctcagatccattcctcattgccatccag
taccagcttcctctgctgctgatgctgagtttcacctacacctccctcaccatcatccgg
gctgtggtgcaggagaaagagaaaaaactaaaggagtatatgcgtatgatggggctcagc
agctggctgcactggagcgcctggttcctcatgttcttcctgttcttcctcatcgtggtc
tccttcatgaccctgctgttctgtgtcaaagtgaagaaggacatagccgtcctttcgaac
agtgatccctccctggttctggtcttcctgctgtgctttgcaatctcctccatctccttc
agcttcatggtcagcaccttcttcagtaaagccaacatagcagcagccgtgggtggcttc
ctctacttcttcacctacaccccctactttttcgtggctcctcggtacaactggatgaca
ctgagtcaaaagctcttgtcctgtctcctatctaatgttgccatggcaatgggagcccag
ctcataggaaaatttgaagccaaaggcactggcgtccagtggcgtgacctcctgaaccct
gtcaacatagatgacgacttctgctttggacaagtgctgggaatgctcctgctggactcg
gcgctctacggcctggtgacctggtacgtggaggctgtcttcccgggccagtttggcgta
ccccagccgtggtacttcttccttatgccctcctactggtgtgggaatccaaggactgtg
gtggggaaggaggaggaaggcagcgacccagaaaaggctctcagaaacgagtactttgaa
gccgagccggaggacttggtggctgggatcaagatcaagcacttgtccaaggtgttccaa
gtgggtaataaggacaagatgggcatcagagacctgaccctgaacctctatgaaggacag
ataacagtcctcctgggccacaacggtgctgggaagaccacgaccatgtctatgctgaca
ggtctcttcccccctaccagtgggcatgcttatattcatggatatgagatttcccaagac
atggttcagatccgcaagagcttgggcctgtgtccccagcatgacgtcctgtttgacaac
ctgacagtggcagaacatctctacttctatgcacagctgaaaggcctttctctccagaag
tgccctgaagaagtcaagcagatgctgcacatcctcagtctggaggacaagcgggacttg
cggtccaagttcctgagtggggggatgaagcgcaagctctccattggcatcgccctcata
gcgggctctaaggtgctgatgttagacgaacccacctcaggcatggatgcagtgtccagg
agggccatctgggaccttcttcagcagcagaagagtgaccgtacggtcctgctgaccact
cacttcatggatgaagctgacctgctgggagaccgcatcgccatcttggccaagggggag
ctccagtgctgtgggtcttcactgtttctcaagcagaaatacggagccggctaccacatg
acgctggtaaaagaaccacactgcaatcctgaaggaatctctcagctagtgcaccaccat
gtccccaatgccatgctggagagccatgctggggctgagctgtcctttattcttcccaag
gaaagcacacacaggtttgaaggtctgtttgctaaactggaaaagaagcagaaggaattg
ggcattgcaagcttcggggcctctgtcaccaccatggaggaagtcttccttcgggttggt
aagctggtggacaccagcatggacattcaagccatccaacttcctgctctgcagtaccag
catgagaggcgggcaagtgactgggctttggacagtaacctgtgtggggtgatggaccca
acgaacggcattggaaccctcatagaggaagaagaagttctggtcaagctcaacacaggg
cttgccctccactgccagcagttctgggccatgttcctgaagaaggctgcatacagctgg
cgggaatggaagatggtagcagctcaggtcctggtccccctgacctgcctcaccctggcc
ctcctggctatcaactacacctcagagctctttgatgctcctctcctgaagctaagcctg
aatgagtacggtagaacagttgtgcccttctcggtcccaggcacatccaagctgagtcag
cagttgtctgaccatctaagagacatgctgcaggctgagaggcaagagccccgtgaggtg
ctaggtgacctagaggagttcctggttttcagggcctcagtggaagggggcggctttaat
gagcggtgcctggtagcaacatccttccaagacagagaagagcggacagaggtcactgcc
ctgttcaacaaccaggcataccactcccctgccactgccttggccattgtggacaacctt
ctgttcaagctactgtgtggccctcgagcctccattgagatctccaactacccccagccc
cggagcaccctgcaggtcgccaaggaccagttcaacgagggccggaagggatttgacatt
gccctcaatttgctcatcgccatggcatttctggccagcacgtttaccatcctggcagtt
agtgagagggccgtccaggccaaacacgttcagtttgtgagcggtgtccatgtggctact
ttctggctctctgctctgctgtgggacctcatctccttcctcgttcccagtctactactt
ctggtagtgttccaagccttcaatgtgcacgccttcacgagggatggccacatggctgac
ttgctgctgctgctcatgctgtatggctgggccatcattcccctcatgtacctcatgagc
ttcttcttctcggctgcgtccacggcttataccagggtgaccatattcaacatcctgtcg
ggccttgccaccttcatcgtggtcactatcatgcgtatcccagctgtgaagttagaagaa
ctttccagaacattagatcatgtgttcttggtgctgccaaaccactgcctggggatggcg
gtcagcaacttctatgagaactttgagactcggcggtactgcacttcctcagaggttgct
gcccactactgcaagaagtacaacatccagtaccaggagaatttctatgcctggagcacc
ccgggcgttggcaagtttgtgacttccatggctgcctcagggggcatctacctcaccctg
ctcttcctcattgagaccaacctgctgtggagactgagaagcttcatctgtgccttccgg
aggaggtggactctggcagaattgcagaaccggacatcagtacttcctgaggaccaggat
gtagctgctgagaggagccgaatcctggtccctagcttggactccttgctcgacacacca
ctgatcatcaatgagctctccaaggtgtatgaccagcgagtaccgctcctcgccgtggac
aggatctcccttgcagtccagaaaggggagtgctttggcctattgggtttcaatggagct
ggaaaaaccacaacattcaaaatgctgactggggaggagacgatcacttcaggggatgcc
tttgttggtggttacagcatcagttctgacattgggaaggtacggcagcggatgggctac
tgcccccagtttgatgcactgcttgatcacatgactggcagggagatgctggtcatgtat
gcacgactccgaggcatcccggagcgcctcatcgatgcctgtgtagagaatactctgcgg
ggtctgctcctggagccacacgccaacaaactagtcaagacttacagtggtggtaacaaa
cgcaagctaagcactggcattgccctcattggagagcctgcagtcatcttcctggatgaa
ccatccaccggcatggaccctgtggcccggcgtctactctgggacactgtagcccgggcc
cgagagtctggcaaagccattgtcatcacctcccacagtatggaggagtgtgaagcctta
tgtacccggctggccatcatggtacagggccagttcaagtgcctgggcagcccacagcac
ctcaagagcaagtttggcagtggctactccctgcaggccaaggtccggagtgaggggaag
caagaagtactagaggagttcaaggcatttgtggacctgaccttcccaggcagcatccta
gaagatgagcatcaagacatggtccattatcatctaccgggctgtgacctcagctgggcc
aaggtatttggtatcctggagaaggccaaggagaggtatggagtggatgattactctgtg
agccagatctcgctggagcaggtcttcctgagctttgcccacctgcagccccccaccact
gaggatggacgatga
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integrated database retrieval system
