Arvicanthis niloticus (African grass rat): 117710858
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Entry
117710858 CDS
T08817
Symbol
Chrne
Name
(RefSeq) acetylcholine receptor subunit epsilon
KO
K04817
nicotinic acetylcholine receptor epsilon
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117710858 (Chrne)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
anu04040
]
117710858 (Chrne)
Ion channels [BR:
anu04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
117710858 (Chrne)
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
117710858
NCBI-ProteinID:
XP_034362018
EnsemblRapid:
ENSANLG00005003967
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All DBs
Position
6:51199134..51203431
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AA seq
517 aa
AA seq
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MAGALLGALLLLTLFGRSQGKNEELSLYHHLFDNYDPGCRPVRRPEDTVTIKLKVTLTNL
ISLNEKEETLTTSVWIGIEWCDYRLNYNADDFAGVNVLRVPSNHVWLPEIVLENNIDGQF
GVAYDSNVLIYEGGCVSWLPPAIYRSTCAVEVTYFPFDWQNCSLIFRSQTYNAEEVNFIF
ALDDNNNTIDKIDIDTAAFTENGEWAIDYCPGVIRHYEGGSTEGPGETDVIYTLIIRRKP
LFYVINIIVPCVLISGLVLLAYFLPAQAGGQKCAVSINVLLAQTVFLFLIAQKIPETSLS
VPLLGRYLIFVMVVATLIVMNCVIVLNVSLRTPTTHATSPRLRQILLELLPRLLGSSPPP
EDPRTASPARRASSVGILLRAEELILKKPRSELVFEGQRHRHGTWTAALCQNLGAAAPEI
RGCVDAVNFVAESTRDQEATGEELSDWVRMGKALDKVCFWAALVLFSVGSTLIFLGSYFN
QVPDLPYPPCIQPGPATTAAPTLAPTPKEEILKKDCQ
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggcaggggctctgcttggggccctgcttctcctgacactctttggcagaagccagggg
aagaatgaagagcttagcctgtaccaccatctcttcgacaattatgacccaggatgccgg
ccagttaggagacccgaggacactgtcaccatcaagctcaaggtcaccctaaccaacctc
atctcactgaacgagaaagaagaaactctgaccaccagtgtctggatcggaattgaatgg
tgtgactatcggctcaactacaacgcggacgattttgcaggtgtaaatgttctgcgggtc
ccttcaaaccatgtatggctgccagagattgttctagaaaacaatattgatggacagttt
ggagtggcgtatgacagcaatgttcttatctatgagggaggctgtgtgagctggctgccc
ccagccatttaccggagcacctgcgcagtggaggtcacctattttccgtttgactggcag
aactgctctctcatttttcgctcccagacctacaatgctgaagaggtgaatttcatcttt
gcattggatgacaataacaacaccatcgacaaaattgacatcgacactgcggcttttacc
gagaatggagaatgggccatcgactactgcccaggcgtgattcgccactatgagggaggc
tcgacagaaggccccggagaaacagacgttatctacacgctcatcatccgccggaagccg
cttttttatgtcattaacatcattgtgccttgtgtgctcatttctggcttggtgctgctc
gcttacttcctgcctgcacaggctggtggccagaaatgcgcggtctctatcaacgtcctg
ctagcccagactgtcttcttgtttctaattgcccagaaaattccagagacgtctctgagc
gtgccgctgctgggcaggtatcttattttcgtcatggtggttgccacactcattgttatg
aattgcgtcatcgtgctcaacgtatctttgcggacgccaacgacccatgccacatctcct
cggctgcgccagattttattagagctactgccgcgtctcctgggctcgagcccaccccca
gaagatccccgaactgcctcaccagcgaggcgtgcctcgtctgtgggcattctgctcaga
gcggaagagctcatcttgaaaaagccgaggagcgaacttgtgtttgaggggcagaggcat
cggcatggaacttggactgcagccctctgccagaacctgggtgctgcagcccctgagatc
cgcggctgtgtggatgctgtgaactttgtggctgagagcacaagggaccaggaagccact
ggagaggaattgtctgactgggtgcgtatggggaaagccctcgacaaagtctgtttttgg
gcagctttggtgctcttcagtgtcggttctactcttatcttccttggaagttacttcaac
caagttcctgatctcccctacccaccgtgcatccaacctgggcctgcaacaacagcagca
cccaccttggctccaacccccaaggaagagattttgaaaaaagactgccaataa
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