Arvicanthis niloticus (African grass rat): 117710875
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Entry
117710875 CDS
T08817
Symbol
Itga3
Name
(RefSeq) integrin alpha-3 isoform X1
KO
K06482
integrin alpha 3
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04151
PI3K-Akt signaling pathway
anu04510
Focal adhesion
anu04512
ECM-receptor interaction
anu04640
Hematopoietic cell lineage
anu04810
Regulation of actin cytoskeleton
anu04820
Cytoskeleton in muscle cells
anu05165
Human papillomavirus infection
anu05200
Pathways in cancer
anu05222
Small cell lung cancer
anu05410
Hypertrophic cardiomyopathy
anu05412
Arrhythmogenic right ventricular cardiomyopathy
anu05414
Dilated cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
117710875 (Itga3)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117710875 (Itga3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117710875 (Itga3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
117710875 (Itga3)
04810 Regulation of actin cytoskeleton
117710875 (Itga3)
09150 Organismal Systems
09151 Immune system
04640 Hematopoietic cell lineage
117710875 (Itga3)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
117710875 (Itga3)
09162 Cancer: specific types
05222 Small cell lung cancer
117710875 (Itga3)
09172 Infectious disease: viral
05165 Human papillomavirus infection
117710875 (Itga3)
09166 Cardiovascular disease
05410 Hypertrophic cardiomyopathy
117710875 (Itga3)
05412 Arrhythmogenic right ventricular cardiomyopathy
117710875 (Itga3)
05414 Dilated cardiomyopathy
117710875 (Itga3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
anu04147
]
117710875 (Itga3)
04515 Cell adhesion molecules [BR:
anu04515
]
117710875 (Itga3)
04090 CD molecules [BR:
anu04090
]
117710875 (Itga3)
Exosome [BR:
anu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117710875 (Itga3)
Cell adhesion molecules [BR:
anu04515
]
Integrins
Integrin alpha subunits
117710875 (Itga3)
CD molecules [BR:
anu04090
]
Proteins
117710875 (Itga3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_1
Integrin_A_Ig_2
FG-GAP
FG-GAP_3
Motif
Other DBs
NCBI-GeneID:
117710875
NCBI-ProteinID:
XP_034362047
LinkDB
All DBs
Position
6:27318819..27352780
Genome browser
AA seq
1066 aa
AA seq
DB search
MGTGPRRAPRDPGWMLRALALMVAAIGRVAFAFNLDTRFLVVKEAVNPGSLFGYSVALHR
QTERQQRYLLLAGAPRDLAVDDSYTNRTGAVYLCPLTALKNDCERMDISERSDPDHHIIE
DMWLGVTVASQGPAGRVLVCAHRYTKVLWSGLEDQRRMVGKCYVRGNDLQLDPGDDWQTY
HNEMCNSNTDYLQTGMCQLGTSGGFTQNTVYFGAPGAYNWKGNSYMIQRKDWDLSEYSYR
GSEDQGNLYIGYTVQVGSAILHPTEITVVTGAPRHRHMGAVFLLKQESGGDLQRKQVLKG
TQVGSYFGSAIALADLNNDGWQDLLVGAPYYFERKEEVGGAVYVFMNQAGTSFPDQPSLL
LHGPSRSAFGVSVASIGDINQDGFQDIAVGAPFEGLGKVYIYHSSSGGLLRQPQQIIHGE
KLGLPGLATFGYSLSGKMDVDENFYPDLLVGSLSDHIVLLRARPVINILHRTLVARPAVL
DPSLCTATSCVQVELCFAYNQSAGNPNYRRNITLAYTLEADRDRRPPRLRFARSQSSVFH
GFFSMPETHCQTLELLLMDNVRDKLRPIVIAMNYSLPLRMPDRLKLGLRSLDAYPVLNQA
QAMENHTEVHFQKECGPDNKCDSNLQMQAAFVSEQLQPLSRLQYSRDTKKLFLSINVTNS
PSRQRAGEDAHEALLSLEVPPILLRSSVRPAGTCQGNETILCELGNPFKRNQRMELLIAF
EVIGVTLHTRDLQARLQLSTSSHQDNLQPVLLTLQVDYTLQASLSLMNHRLQSFFGGTVM
GEAAMKTVKDVGSPLKYEFQVSPVGDGLAALGTLVLGLEWPYEVSNGKWLLYPTEITIHS
NGSWPCRPSGNLVNPLNLTLSDAGVKPLSPQRRRRQLDPGGDQGSAPVTLAATKKAKSET
VLTCSNGRARCVWLECPLPDSSNVTNVTVKARVWNSTFIEDYKDFDRVRVDGWATLFLRT
SIPSINMENKTTWFSVDIDSELVEELPAEIELWLVLVAVGAGLLLLGLIILLLWKCDFFK
PTRYYRIMPKYHAVRIREEDRYPPPGSTLPTKKHWVTSWQIRDRYY
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atgggcaccggcccccgccgcgcgccccgcgaccctggctggatgctccgcgccctggcc
ttgatggtggcggctatcggccgggtcgcctttgccttcaacctggacacccgattcctg
gtggtgaaggaggcggtgaaccccggtagcctcttcggctactcggtcgccctccatcgg
cagactgagcgacagcagcgctacctccttctggccggtgctccccgagaccttgctgtg
gatgacagctataccaaccggactggtgctgtgtacctgtgtcccctcactgccctcaag
aatgattgtgaacggatggacatttcagagagaagtgaccctgaccatcacattattgag
gacatgtggcttggagtgaccgtggccagccagggccctgcaggtagagtcctggtctgt
gcccatcgatacaccaaggtgctgtggtctgggctcgaagaccagaggcgcatggtaggc
aagtgctatgtgcgtggcaacgacctccagctcgaccctggcgatgactggcagacatac
cacaatgagatgtgtaacagcaacactgactacctgcagactggcatgtgccagctgggc
accagcggcggctttacccagaacactgtatacttcggtgcccctggtgcctacaactgg
aaaggaaacagctacatgattcagcggaaggactgggatttatctgaatatagctacagg
ggctcagaggaccagggaaacctctatattgggtacacggtgcaggtaggcagtgccatc
ctacatcccacggaaatcactgttgtgacgggcgctccacggcaccggcatatgggcgct
gtcttcttgctgaaacaagagtcaggtggagacctgcagaggaagcaggtgctgaagggc
acgcaggtgggctcttattttggcagtgccattgccctggcagacctgaacaatgatggg
tggcaggacctcctggtgggtgctccctactactttgaacggaaagaggaggtagggggt
gccgtctatgtcttcatgaaccaggccggcacatccttccctgatcaaccttccctcctg
cttcatggccccagtcgctctgcctttggcgtctctgtcgccagcattggtgacatcaac
caggatggattccaggacattgctgtaggagctccatttgagggcttgggcaaagtatac
atctaccacagcagctccggggggctcctcaggcagccccagcagataattcatggagag
aaactaggactgccgggcttggccaccttcggctactctctgagtgggaagatggatgtg
gatgaaaacttttacccagacctgctagtagggagcctgtcggaccacattgtgctgctg
cgggcccgacctgtcatcaatatcctccataggaccttggtggccaggccagctgtgttg
gacccctcactttgtacagctacttcctgtgttcaggtggagctgtgctttgcctacaac
caaagcgctgggaaccccaactacaggcggaacatcaccctggcttacacactggaggct
gacagggaccgacgcccgcccaggctccgatttgcccgtagccagtcttctgttttccat
ggcttcttctccatgccagagacacattgccagacattggagctactgctgatggacaat
gttcgtgataaactccgtcctatcgtcattgccatgaactattccttacctttgcgcatg
cccgatcgtctcaagctgggcttgcggtctctggatgcctacccagtcctcaaccaggca
caggctatggagaatcacactgaggtccacttccagaaagaatgcgggccagacaacaag
tgtgacagcaacctgcagatgcaagcagccttcgtgtctgagcaactgcagcctctaagc
aggctccagtacagcagagacactaagaaactcttcttgagcatcaatgtgaccaattcg
ccgagccgccaacgggctggggaagacgctcatgaggcgctactcagcttagaggtgcca
cccattctgctacggtcctcagtgcgcccagctgggacctgccaaggcaatgagaccatc
ttgtgtgagctaggaaatcccttcaaacggaaccagaggatggagctgctcattgccttt
gaggtcatcggggtgaccttgcacacgagggaccttcaggctcgtctacagctatccacg
tcaagtcaccaggacaacttgcagcccgtgctcctgactttgcaggtggactacaccctc
caggcctcgctcagcttgatgaaccatcggctgcagagcttctttggtgggacagtgatg
ggtgaggctgccatgaaaactgtgaaggatgtgggaagccccctgaaatatgaattccag
gtgagcccagtgggagatgggctggcagccttgggcacactggttctaggtctggagtgg
ccctatgaagttagcaatggcaagtggctgctgtatcccacggagatcaccatccatagc
aatgggtcctggccctgccggccatctggaaaccttgtcaaccctctcaaccttactctc
tctgacgctggagtcaagccactgtccccacagcgcagacgaaggcaactggacccaggg
ggagaccagggttccgcgcctgtcacgctagctgctaccaaaaaagccaagtctgagacc
gtgttgacctgttccaatggccgcgcccgctgtgtgtggctggagtgtccccttcccgat
tcctccaatgttaccaatgtgaccgtgaaggcgcgggtgtggaacagcaccttcattgag
gactacaaagactttgacagagtcagggtagatggctgggctaccctgttcctgagaacc
agcatcccttccatcaacatggagaacaagaccacatggttctcagtggacattgactca
gagctggtggaggagctgcctgctgagatcgagctgtggttggtgcttgtggccgtgggc
gctgggttgctgttgctgggcctcatcatcctcttgctgtggaagtgtgacttctttaag
ccgacccgctattaccggattatgcccaagtaccacgcagtgcgtatccgggaggaggac
cgctacccacctccagggagcacgctacccaccaagaagcactgggtcaccagctggcag
atccgggaccgatactactga
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