Arvicanthis niloticus (African grass rat): 117710881
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Entry
117710881 CDS
T08817
Symbol
Gfap
Name
(RefSeq) glial fibrillary acidic protein isoform X1
KO
K05640
glial fibrillary acidic protein
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04630
JAK-STAT signaling pathway
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04630 JAK-STAT signaling pathway
117710881 (Gfap)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
anu04131
]
117710881 (Gfap)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
anu04812
]
117710881 (Gfap)
Membrane trafficking [BR:
anu04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
117710881 (Gfap)
Cytoskeleton proteins [BR:
anu04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
117710881 (Gfap)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
DUF1664
GAS
Motif
Other DBs
NCBI-GeneID:
117710881
NCBI-ProteinID:
XP_034362053
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All DBs
Position
6:19538112..19550979
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AA seq
430 aa
AA seq
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MERRRITSARRSYASSETVVRGLGPSRHLGTMPRFSLSRMTPPLPARVDFSLAGALNAGF
KETRASERAEMMELNDRFASYIEKVRFLEQQNKALAAELNQLRAKEPTKLGDVYQAELRE
LRLRLDQLTANSARLEVERDNLAQDLGTLRQKLQDETNLRLEAENNLAAYRQEADEATLA
RVDLERKVESLEEEIQFLRKIHDEEVRELREQLAQQQVHVELDVAKPDLTAALREIRTQY
EAVATSNMQETEEWYRSKFADLTDAASRNAELLRQAKHEANDYRRQLQALTCDLESLRGT
NESLERQMREQDERHARESASYQEALARLEEEGQSLKEEMARHLQEYQDLLNVKLALDIE
IATYRKLLEGEENRITIPVQTFSNLQIRETSLDTKSVSEGHLKRNIVVKTVEMRDGEVIK
ESKQEHKDVM
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atggagcggagacgcatcacctctgcgcgccgctcctatgcctcctccgagacggtggtc
agaggccttggtcctagtcgacacctgggtaccatgccgcgcttctccctgtctcgaatg
actcccccactccctgccagggtggacttctccctggccggggcgctcaatgctggcttc
aaggagactcgggccagtgagcgcgcagagatgatggaactcaatgaccgctttgctagc
tacatcgagaaggtccgcttcctagaacagcaaaacaaggcgctggcagctgagctgaac
cagcttcgagccaaggagcccaccaaactgggcgacgtctaccaggcagagcttcgggag
ctgcggctgcggctggaccagcttactgccaacagtgcccggctggaagtggagagggac
aatctcgcacaggacctcggcaccctgaggcagaagctccaagatgaaaccaacctgagg
ctggaggcagagaacaacctggctgcatatagacaggaggcagatgaagccaccctggct
cgtgtggatctggagaggaaggttgaatctctggaggaggagatccagttcttgaggaag
atccatgatgaggaagttcgagaactccgggagcagctggcccaacagcaggtccatgtg
gagctggatgtggccaagccagacctcacagcagccctgagggagattcgcactcaatac
gaggcagtggccaccagtaacatgcaagagacagaggagtggtatcggtccaagtttgca
gacctcacagacgctgcttcccgcaacgccgagctgcttcgccaagccaagcacgaggct
aatgactaccgccgccaactgcaggccttgacctgcgacctggagtccttgcgcggcact
aacgagtccctggagaggcaaatgcgggaacaggacgagcgccatgcacgggagtcggcg
agttaccaggaggcactcgctcggctggaggaggagggccaaagcctcaaggaggagatg
gcccgccacctgcaggagtaccaggatctactcaacgttaagctagccctggacatcgag
atcgccacctacaggaaattgctggagggcgaagaaaaccgcatcaccattcctgtacag
actttctccaacctccagatccgagaaaccagcctggacaccaaatccgtgtcagaaggc
cacctcaagaggaacatcgtggtaaagacagtggagatgcgggatggtgaggtcattaag
gagtcaaagcaggagcacaaggatgtgatgtga
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