Arvicanthis niloticus (African grass rat): 117710905
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Entry
117710905 CDS
T08817
Name
(RefSeq) tripartite motif-containing protein 34A isoform X1
KO
K11999
tripartite motif-containing protein 6/22/34
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
anu04121
]
117710905
Ubiquitin system [BR:
anu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117710905
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_2
zf-RING_10
zf-C3HC4_3
zf-RING_5
RING_XB3-XBAT31
zf-RING_2
zf-RING_6
Uds1
PMEI
PRY
zf-UDP
Prok-RING_4
Baculo_IE-1
Gp58
TRAF3_RING
Rad50_zn_hook
Motif
Other DBs
NCBI-GeneID:
117710905
NCBI-ProteinID:
XP_034362093
LinkDB
All DBs
Position
1:73453807..73464004
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AA seq
485 aa
AA seq
DB search
MASTGLMDVQKEATCPVCQELLTEPLSLGCGHRICQACLTMNKNAVINSRGKSSCPVCGT
RFSFENLQANKHLADVVERLSEVKLNPGIGKKRDRCVHHGEKLLLFCKEDKKVICWVCER
SQEHRGHHTLLLEEAVRECQENLQKALKRLREEQKKVETLEADIKEDRISWKHQIQTERQ
RIQTGFNQLRRILDKEEQRELGRLGEEEQMILDSLAGAEAELAQQNQLVEELIWDLERRR
EWPDTELLQDMSGILKWSQVWTLKKPKAVSKQLKMVFQTPDLSGMLQKFRELTAVRAYWA
DFTFNPKNLNLNLILSEDHRQVTSLSIWPYKCCNNGILGSKCFSSGKHYWEVDVSKKNAW
TLGVYTRKRTLKFDVRGGKSQSNGYHRYKPKNGYWVIGLQDGSRYSIFENSSNRDPTVLN
PFVATPLHRVGVFLDCEEGIVSFFNVTNHGSLIYKFSQCCFSQPAYPYFNPWDCPAPMTL
CPRNS
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggcctcaacaggtctgatggatgtacagaaggaggccacttgccctgtctgccaagag
cttttgacagaacctctgagtctaggctgtggccaccgtatatgccaagcctgccttacc
atgaacaagaatgcagtgatcaactccagagggaaaagcagctgtcctgtgtgtggtacg
agattctcatttgaaaatctacaggctaacaagcatctggcagatgtagtagagagactc
agtgaagtcaagttgaaccctggcattgggaaaaagagagatcgctgtgtacaccatgga
gagaaactccttctcttctgtaaggaggacaagaaggtcatttgctgggtttgtgagcgt
tctcaggagcatcgtggtcaccacacattactcctggaggaagcagtcagagaatgtcag
gagaatctccagaaagctctcaagaggctgagggaggagcagaagaaggtggagacattg
gaagctgacatcaaagaagacagaatttcctggaagcaccagatccagacggagagacaa
aggatacaaacaggctttaatcagcttagaagaatcctggacaaggaggaacagagagag
ctgggaagacttggagaagaggaacagatgatactagacagcctggcaggggcagaggct
gagctggctcaacagaaccaattggtggaggaacttatctgggatctagagcggcggcgt
gagtggccagacacagagctgctgcaggatatgagtggtatcttgaaatggagtcaggtc
tggacactgaagaagccaaaagcagtttcaaagcaactgaagatggtattccaaactcct
gatctgagtggcatgctacaaaagtttagagagctaacagctgtccgtgcctactgggcg
gacttcacgtttaatccaaaaaacctaaatttgaatcttattctttcagaagatcacaga
caagtgacatctttgtccatttggccctataagtgttgtaataatgggatcttgggctcc
aaatgtttctcctcaggaaaacattactgggaagtagatgtgtctaaaaagaatgcctgg
accctaggagtttacactagaaaacgtactttaaagtttgatgtcagaggaggcaaaagt
cagtcaaatggttaccatagatacaaacctaagaatggctactgggttatagggttacag
gatggatcgaggtatagtatctttgagaattcttccaaccgtgaccctacagttctgaac
ccctttgtggccacccctctccatcgggttggggttttccttgactgtgaagagggcata
gtgtccttcttcaatgtcacaaaccatgggtcactcatttacaagttctcccaatgctgc
ttttcccaacctgcctatccctatttcaatccctgggactgtccagcccctatgaccctg
tgtcctcgaaactcctga
DBGET
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