Arvicanthis niloticus (African grass rat): 117710939
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Entry
117710939 CDS
T08817
Symbol
Gabra6
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-6 isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04080
Neuroactive ligand-receptor interaction
anu04082
Neuroactive ligand signaling
anu04723
Retrograde endocannabinoid signaling
anu04727
GABAergic synapse
anu04742
Taste transduction
anu05032
Morphine addiction
anu05033
Nicotine addiction
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117710939 (Gabra6)
04082 Neuroactive ligand signaling
117710939 (Gabra6)
09150 Organismal Systems
09156 Nervous system
04727 GABAergic synapse
117710939 (Gabra6)
04723 Retrograde endocannabinoid signaling
117710939 (Gabra6)
09157 Sensory system
04742 Taste transduction
117710939 (Gabra6)
09160 Human Diseases
09165 Substance dependence
05032 Morphine addiction
117710939 (Gabra6)
05033 Nicotine addiction
117710939 (Gabra6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
anu04040
]
117710939 (Gabra6)
Ion channels [BR:
anu04040
]
Ligand-gated channels
GABA-A
117710939 (Gabra6)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Rv2743c
Motif
Other DBs
NCBI-GeneID:
117710939
NCBI-ProteinID:
XP_034362160
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All DBs
Position
6:78112669..78126873
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AA seq
453 aa
AA seq
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MVLLLPWLFIILWLENAQAQLEDEGNFYSENVSRILDNLLEGYDNRLRPGFGGAVTEVKT
DIYVTSFGPVSDVEMEYTMDVFFRQTWTDERLKFKGPAEILSLNNLMVSKIWTPDTFFRN
GKKSIAHNMTTPNKLFRLMQNGTILYTMRLTINADCPMRLVNFPMDGHACPLKFGSYAYP
KSEIIYTWKKGPLYSVEVPEESSSLLQYDLIGQTVSSETIKSNTGEYVIMTVYFHLQRKM
GYFMIQIYTPCIMTVILSQVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYA
TAMDWFIAVCFAFVFSALIEFAAVNYFTNLQSQKAERQAQTAATPPVAKSKAAEPLEAEI
VVHSDSKYHLKKRISSLTLPIVPSSEASKVLSRTPILQSPPVSPPLLLPAIGGTSKIDQY
SRILFPVAFAGFNLVYWIVYLSKDTMEVSSTVE
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggtgttgcttctaccctggctcttcattattctatggctagaaaatgcccaagctcaa
cttgaagatgaaggcaacttctactctgaaaatgtcagtcggattcttgacaacttgctg
gaaggctatgataaccgtctacgaccaggatttggaggtgctgtaacagaagtcaaaaca
gacatctatgtgaccagcttcgggcctgtgtcagatgtggagatggagtatacaatggat
gtcttcttccgccagacatggactgatgagaggctgaagtttaaaggccctgctgagatt
ctgagcttaaataacttgatggtcagtaagatctggactcctgacacttttttccggaat
gggaaaaagtcaattgctcacaacatgacgacccctaacaagctcttccgattaatgcag
aatggaacaatcctgtataccatgaggcttaccatcaatgctgattgtcccatgagactg
gttaacttccctatggatggacacgcttgtccactcaagtttggaagctatgcttaccct
aaaagtgaaatcatatatacatggaaaaaaggaccgctttattcagtagaagtaccagaa
gaatcttctagcctcctccagtatgatttgattgggcaaacagtttctagtgagactatt
aaatctaacactggtgaatatgtaataatgacagtctatttccacttacaaaggaaaatg
ggctatttcatgatccagatatacactccgtgcatcatgacagttattctttctcaagtg
tctttttggattaataaggagtctgtcccagcaagaactgtctttggaatcaccactgtt
ttaaccatgaccaccttaagcatcagtgctcgtcactctctacccaaagtgtcctatgca
actgccatggattggttcattgctgtctgctttgcgtttgtcttttctgctctcattgaa
ttcgcagctgtcaactacttcaccaatctccagtcacagaaggctgaaaggcaggcgcag
actgcagccacgccccccgtggcaaagtcaaaagcagccgaaccactggaagctgagatt
gttgtgcattctgactccaagtaccatctgaagaagagaatcagctctctgactttgccg
atcgttccatcttctgaggccagtaaagtcctcagtagaacgcccatcttacaatcaccg
cctgtctctcccccattgctcttaccagccattggtggcaccagtaaaatagatcagtat
tctcgaatactcttcccagtagcatttgcaggattcaaccttgtgtactggatagtttac
ctttccaaagatacaatggaagtgagcagtactgttgagtag
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