Arvicanthis niloticus (African grass rat): 117710952
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Entry
117710952 CDS
T08817
Symbol
Ush1g
Name
(RefSeq) pre-mRNA splicing regulator USH1G
KO
K21878
Usher syndrome type-1G protein
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
117710952 (Ush1g)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
anu03037
]
117710952 (Ush1g)
Cilium and associated proteins [BR:
anu03037
]
Primary cilia and associated proteins
USH complex and associated proteins
117710952 (Ush1g)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank_4
Ank
Ank_3
Ank_5
SAM_1
SAM_2
Chorismate_synt
Motif
Other DBs
NCBI-GeneID:
117710952
NCBI-ProteinID:
XP_034362184
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All DBs
Position
6:7121305..7125201
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AA seq
461 aa
AA seq
DB search
MNDQYHRAARDGYLELLKEATRKELNAPDEDGMTPTLWAAYHGNLESLRLIVSRGGDPDK
CDIWGNTPLHLAASNGHLHCLSFLVSFGANIWCLDNDYHTPLDMAAMKGHMECVRYLDSI
AAKQSSLNPKLVGKLKDKAFREAERRIRECAKMQRKHHERMERRYRRELAERSDTLSFSS
LTSSTLSRRLQHMTLGSQLPYSQATLHGTAKGKAKIQKKLERRKQGVEGTFKVSEDGRKS
VRSLSGLQLGSDVMFVRQGTYANPKEWGRAPLRDMFLSDEDSVSRATLAAEPAHSEVSTD
SGHDSLFTRPGLGTMVFRRNYVSSGLHGLGREDGGLDGGGTPRGRLHSSPSLDDDSLGSA
NSLQDRSCGEELPWDELDLGLDEDLEPETSPLETFLASLHMEDFASLLRHEKIDLEALML
CSDLDLRSISVPLGPRKKILGAVRRRRQALERPLALEDTEL
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaccagtatcaccgggccgccagggatggctatttggagctcctcaaggaggcc
acccggaaggagctaaatgcccctgacgaggatggcatgaccccaaccctctgggctgcc
taccatggcaacctggagtcgctgcgcctcattgtgagccgcgggggtgacccggataag
tgtgacatctgggggaacacacccttgcatctggcagcttccaacggtcacctgcactgc
ctgtccttcctcgtgtccttcggggccaacatctggtgcctggacaatgactaccacacg
ccgctggacatggccgctatgaagggccacatggagtgcgtgcgctatctggattccatc
gcggccaagcagagcagccttaaccccaagctggtgggcaagctgaaggacaaggccttc
cgagaggcggagcggcgcatccgcgaatgcgccaagatgcagcgcaagcaccacgagcgc
atggagcggcgctaccggcgcgagctggccgagcgctccgacacgctcagcttctccagc
ctcacgtccagcaccctgagccgccggctgcagcacatgacgctgggcagccagctgccc
tactcgcaggccacactgcacggcacggccaagggcaaggccaagatccagaagaagctg
gagaggcgcaagcagggggtcgagggcaccttcaaggtctccgaggacgggcgcaaaagc
gtccgatcgctctcgggcctgcagctgggtagcgatgtgatgtttgtgcgccagggcacc
tatgccaaccccaaggagtggggccgtgccccactcagggacatgttcctctcggacgag
gacagcgtctcccgtgccacgctggctgccgagcctgcccactcggaggtcagcaccgac
tcaggtcacgactccttgtttactcgccctggcctaggtaccatggtgtttcgaaggaac
tatgtgagcagcgggctgcacgggctgggccgagaggacgggggcttggatgggggaggc
acgccgcggggtcggctgcatagttcccccagcctggacgacgacagcctgggcagtgcc
aacagcttgcaggaccgcagttgcggggaagagttaccctgggatgaactagacttgggg
ttggatgaggacctggagcccgagaccagccccttggagaccttcctggcctcgctgcac
atggaggacttcgcctccctcctgcggcacgagaagattgacctggaggccctgatgctg
tgctctgacctcgacctacgcagcatcagcgtgcccctggggcctcggaagaagatcctg
ggggccgtgaggaggcgcaggcaggctctggagcgacccctggccctggaggacacagaa
ctgtga
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