Arvicanthis niloticus (African grass rat): 117710961
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Entry
117710961 CDS
T08817
Symbol
Caskin1
Name
(RefSeq) caskin-1 isoform X1
KO
K21952
CASK-interacting protein
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
anu04131
]
117710961 (Caskin1)
Membrane trafficking [BR:
anu04131
]
Exocytosis
Calcium ion-dependent exocytosis
Kinases and associated proteins
117710961 (Caskin1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
SAM_1
Ank_5
Caskin-Pro-rich
Caskin-tail
SAM_2
Ank_3
Caskin1-CID
SH3_2
SH3_1
SH3_9
Motif
Other DBs
NCBI-GeneID:
117710961
NCBI-ProteinID:
XP_034362194
EnsemblRapid:
ENSANLG00005006640
LinkDB
All DBs
Position
6:complement(91090955..91110841)
Genome browser
AA seq
1466 aa
AA seq
DB search
MGKEQELVQAVKAEDVGTAQRLLQRPRPGKAKLLGSTKKINVNFQDPDGFSALHHAALNG
NTELISLLLEAQAAVDIKDNKGMRPLHYAAWQGRKEPMKLVLKAGSAVNVPSDEGHIPLH
LAAQHGHYDVSEMLLQHQSNPCMVDNSGKTPLDLACEFGRVGVVQLLLSSNMCAALLEPR
PGDTTDPNGTSPLHLAAKNGHIDIIRLLLQAGIDINRQTKSGTALHEAALCGKTEVVRLL
LDSGINAQVRNTYSQTALDIVHQFTTSQASKEIKQLLREASAALQVRATKDYCNNYDLTS
LNVKAGDIITVLEQHPDGRWKGCIHDNRTGNDRVGYFPSSLGEAIVKRAGSRTGSEPSPP
QGGGSLGPSAPPEEIWVLRKPFAGGDRSGSLSSVAGGRSTGGHTLHAGSEGVKLLATVLS
QKSVSESSPGDSPVKPPEGSSGAARSQPPAAHAGQVYGEQPPKKLESASASEGKSAEAVS
QWLATFQLQLYAPNFTSAGYDLPTISRMTPEDLTAIGVTKPGHRKKITAEISGLDIPDWL
PEHKPANLAVWLSMIGLAQYYKVLVDNGYENIDFITDITWEDLQEIGITKLGHQKKLMLA
VRKLAELQKAEYSKYEGGPLHRKAPQSLEMMAIESPPPPEPAAAECQSPKMTTFQDSELS
GELQAALSGPAEAGAAAAEKSSNHLPPTPRTTLRQESSLSGRARHMSSSQELLGDGPQGP
GSPMSRSQEYLLDEGPAPGTPPKEVRSSRHGHSVKRASVPPVPGKPRQVLPSGPSHFTPP
QTPTKAQPGSPQALGGPHGPATAKVKPTPQLLPPTDRPMSPRSLPQSPTHRGFAYVLPQP
VEGEAGSPALGPAPPPVPAAVPTLCLPPEADIEPGRPKKRAHSLNRYAASDSEPERDDLL
VPAAAGPYATVQRRVGRSHSVRAPAGSDKNVNRSQSFAVRPRKKGPPPPPPKRSSSAMAS
ANLADEPAPDVETEDGRLGVRAQRRRASDLAGSVDTGSAGSVKSIAAMLELSSIGGGGRA
IRRPPEGHPTPRPASPEPGRVATVLASVKHKEAIGPDGEVVNRRRTLSGPVTGLLATARR
GPGEPAEQSHFMEDGTARQQLRGSAKGEASAEGPPLARVEASATLKRRIRAKQSQQENVR
FILTESDTVKRRPKAKEPDTGPEPPPPLSVYQNGTATVRRRPASEQAGPPELPPPPPPAE
PPPADLMQLPPLPLPDGNARKPVKPPVSPKPILAQPVSKIQGSPTPASKKVPLPGPGSPE
VKRAHGTPPPVSPKPPPPPTAPKPAKSLAGLQSSSATPSPVPSPARQPPAALVKPASSPP
SQSASPAKPPSPGTPALHVPAKPPRAAASSVVSGPPVASECASPGDSARQKLEETSACLA
AALQAVEEKIRQEDGQGPRPSSIEEKSTGSILEDIGSMFDDLADQLDAMLESGLALGHEH
THLGGTHSLGVALPRASAQSFSVLPP
NT seq
4401 nt
NT seq
+upstream
nt +downstream
nt
atggggaaggagcaggagctggtgcaggcagtgaaggcggaggacgtggggaccgcgcag
aggctgctgcagaggccgcggccggggaaggccaagctcctgggctctaccaagaagatc
aatgtcaacttccaggacccggatggtttctcagccctgcaccatgccgccctgaatggc
aacacagaattgatctctctgctgctggaggcccaggctgctgtagacatcaaggacaac
aaaggcatgcggccattgcactacgcggcctggcagggccggaaggagcccatgaagctg
gtgctgaaggcgggctcagcagtaaatgttccatctgatgagggccacataccgctgcat
ttggctgcccagcatggtcactatgatgtgtcagagatgctactacagcatcagtccaac
ccctgcatggtagacaactccggaaagacacctctggacctggcctgtgagttcggccgc
gtaggggtggtccagctgctgttaagcagtaacatgtgtgctgcgttgctggagcctcgg
ccaggggacaccactgaccccaacggcaccagccccctgcacctggcagccaagaatggc
cacatcgacatcatcaggctccttcttcaggctggcatcgacattaaccgccagaccaaa
tctggcacagcccttcatgaggctgcactctgtgggaagacagaagtggttcggctactg
ttggatagtgggatcaatgcccaggtgaggaacacctacagccagacagcactggacatt
gtccaccaatttactacgtcccaggccagcaaggagatcaagcaactgcttcgagaggcc
tcagcagctctccaggtccgggcaacaaaggattactgtaacaattatgatctgaccagc
ctgaatgtgaaggccggtgacattatcacggtacttgaacagcatccagatggtcggtgg
aaaggctgtatccatgacaaccggactggcaatgacagggtgggctacttcccatcctcc
ctgggggaggctatcgtcaagcgagcaggttcccggacaggcagcgagccaagcccaccc
cagggaggtggctcattgggtccctctgcacccccggaagagatctgggtgctgaggaag
ccttttgcaggtggagatcgcagtggcagcttgagcagtgtggctgggggcaggagtact
gggggtcacaccctgcatgcaggctcggaaggagttaagctcctggcaactgtgctttcc
cagaagtcagtctctgagtccagcccaggagatagcccggtcaagcctccagagggctct
tcaggtgctgcccggtcccagcctccagcagcccatgctgggcaggtatatggggagcag
ccacccaagaagctggaatcggcctcagcctctgagggcaagagtgctgaggcagtcagt
cagtggcttgccacattccagctacagctctatgcccccaacttcaccagtgctggctat
gacctgcccaccatcagtcgtatgacccctgaggacctcacagccattggtgttaccaag
ccaggccaccgtaagaagattacggcggagatcagcggcctggacatccctgactggctg
cctgaacacaaacccgctaacctggctgtgtggctgtcaatgattggtctggcccagtat
tataaggtgctggttgacaacggctatgagaacattgatttcatcactgacatcacttgg
gaggacctgcaggagatcggcatcaccaagctgggacaccaaaagaagctgatgctggcg
gtgaggaaactggcagagctgcaaaaggcagaatactccaagtatgaggggggaccccta
caccgaaaggcaccccaatcacttgaaatgatggccatcgagtcgccgcccccacctgag
cctgctgcagcagagtgccaatctcccaagatgaccaccttccaggacagtgaactcagt
ggtgagctgcaggctgccctgtctggcccagctgaagcaggtgcagctgctgctgagaaa
tcctccaaccacctgccacccactccgaggacaaccttgcgacaggagtccagcctgagt
ggacgggctcggcacatgagcagctctcaggagctgctgggtgacgggcctcaagggcct
ggcagtcctatgtcacgaagtcaggaatacttgctggatgagggcccagctcctggcacc
ccacccaaggaggtgcgatctagccgccatggccacagtgtcaagagggccagcgtgccc
ccggtgcccggcaagccacgacaggtccttccatccggtcccagccacttcacaccccca
cagacacccaccaaagctcagccaggctcccctcaggcccttgggggacctcatggtcca
gccacagccaaggtgaagcctaccccacagctgctaccaccaacagaccgacccatgtca
ccccgctccctgcctcagtcacccacacaccgtggctttgcctatgtactgccccagcca
gttgagggcgaggcagggtcacctgctctgggccctgctcccccaccagtaccagcagct
gtgcccacattatgcttgcccccagaagctgatatagagcctgggcggcccaagaaacgt
gcccacagcttgaatcgctatgcagcgtctgacagtgagccggagagggatgatctgttg
gtgcctgctgctgctggaccctatgccacggtccagcggcgtgtgggtcggagccactca
gtgagggctcctgctggctctgacaagaatgttaaccgcagtcagtcctttgctgtgcgg
ccacgcaagaaggggcccccaccacctccacccaaacgctccagctcggccatggccagt
gccaacctagctgatgagccagctccagatgttgagaccgaggatggccggctgggggtc
agggcacaacgccggcgggctagtgaccttgctggcagtgtggacacaggcagtgctggc
agtgtgaagagcattgcagccatgttggagctgtcttccattgggggcgggggccgggct
attcgccggcccccggaaggccaccccacacctcgtcctgccagtccagagccgggccga
gtagctactgtgttggcctctgtgaagcacaaagaggccattgggcctgacggtgaagtg
gtgaaccggcgccgtacactcagtggcccagtcactggacttttggccactgctcgccgg
ggacctggggaacctgcagagcagagtcattttatggaagatggcacagcccgacaacag
cttcgaggttcagctaagggtgaggcaagtgcagagggtcctccccttgcccgggtagag
gccagtgccacgctcaagaggcgcatccgggccaagcagagccaacaagagaatgtcagg
ttcatcctgacagagtctgacacagtcaagcgcaggcctaaggcaaaggagcctgacact
gggcctgagccacccccaccactgtctgtgtatcagaatggcacagccaccgttcgcaga
cggccagcttcagagcaggctgggcccccagagctgccccctcctcctccacctgctgag
cccccacctgctgacctgatgcagctgcctcctctgcccctgcctgatggcaatgcacgg
aagcccgtgaagccacccgtctctcccaagcccattctggctcagcctgtgtccaagatc
cagggctcacctacacctgcctccaagaaggtgccactgccaggccctggcagcccagag
gtaaagcgtgctcacggaacgccaccgcccgtgtcacccaagcctccgccgccacctaca
gcacccaagccagccaagtctttggcgggactacagtccagcagcgccaccccctcacct
gtgccctcaccggcgcgtcagccgccagcagccctcgtcaagccagctagctcgccgccc
tcacagagcgccagccccgccaagcccccttccccagggacacccgcgctgcacgtaccc
gccaagccccctcgcgctgctgcttcttcagtggtctccggacccccagtagcttcagag
tgtgcttcgcctggggacagcgctcggcagaagctggaagagactagcgcgtgtttggct
gcagcactgcaggcagtggaggagaagatcaggcaggaggatggacaaggtcctcgcccc
tcctccattgaggagaagagcactggcagcatcctggaagacatcggcagcatgttcgac
gacctggccgaccagctggacgccatgctagagagtggccttgcccttggtcacgagcac
acacacctgggaggcacacacagtctgggggtggctctgcccagggcctctgcccagagc
ttctctgttcttccaccttga
DBGET
integrated database retrieval system
