Arvicanthis niloticus (African grass rat): 117711090
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Entry
117711090 CDS
T08817
Symbol
Krt40
Name
(RefSeq) keratin, type I cytoskeletal 40 isoform X1
KO
K07604
type I keratin, acidic
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04382
Cornified envelope formation
anu04915
Estrogen signaling pathway
anu05150
Staphylococcus aureus infection
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09150 Organismal Systems
09152 Endocrine system
04915 Estrogen signaling pathway
117711090 (Krt40)
09158 Development and regeneration
04382 Cornified envelope formation
117711090 (Krt40)
09160 Human Diseases
09171 Infectious disease: bacterial
05150 Staphylococcus aureus infection
117711090 (Krt40)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
anu04812
]
117711090 (Krt40)
04147 Exosome [BR:
anu04147
]
117711090 (Krt40)
Cytoskeleton proteins [BR:
anu04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Types I and II: Acidic and basic keratins
117711090 (Krt40)
Exosome [BR:
anu04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
117711090 (Krt40)
Exosomal proteins of other body fluids (saliva and urine)
117711090 (Krt40)
Exosomal proteins of colorectal cancer cells
117711090 (Krt40)
Exosomal proteins of melanoma cells
117711090 (Krt40)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
IFT57
UPF0242
TPR_MLP1_2
UFD1_N2
ArdA
Motif
Other DBs
NCBI-GeneID:
117711090
NCBI-ProteinID:
XP_034362391
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All DBs
Position
6:22932919..22938738
Genome browser
AA seq
430 aa
AA seq
DB search
MASDCSAGCCSSEPCAGASGCATTSFCPTTTCLSSTCAASRCQTPSFLCRAHLPAGCLSP
CYLAGGCNSPCLVRSCAWCEEGTFNSNEKETMQFLNDRLASYLERVRSLEENNAELECRI
REQCEPDAPLVCPDYQRYFDTIEELQQKILCTKAENSRLAVQVDNCKLAADDFRSKYESE
LSLRQLVENDISGLRGILSELTQCKSDLEAHVESLKDDLLCLKKGHAEEVNLLREQLGDR
LSVELDTAPTVDLNKVLDEMRCQYERVLANNRRDAEEWFAAQTEELNQQQMSSAEQLQGC
QTEMLELKRTANALEIELQAQQTLTESLECTVAETEAQYRTQLAQMQCLITNVEHQLAEI
RCDLERQNQEYQVLLDIRARLECEINTYRGLLEKEDSRLPCNPGSTVSVSNSPCEPCSAY
VICTVENCCA
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atggcttccgactgctccgctggctgctgctcttctgagccctgtgcaggggcatcgggc
tgtgcaacgacctcattctgccccaccacaacttgcctctccagcacctgtgcggcatcc
agatgtcaaaccccgagcttcctctgcagggctcacctcccagccggttgcctctcaccg
tgctacttggctggcggttgtaacagtccttgcctggtgaggagctgtgcatggtgtgag
gaagggacattcaacagtaatgagaaggagaccatgcagttcctgaatgacagactggcc
agctatctggagagggtgagaagcctggaagagaacaatgcagagctggaatgcaggatc
cgagagcagtgtgagcccgatgccccacttgtctgtcccgattatcagcggtacttcgac
accattgaagagctccaacaaaagatattgtgcacaaaggcggagaattctagactcgcc
gtacaagtagacaactgcaaactggctgccgatgattttaggtcaaagtatgagagcgaa
ctgtccctgcgccaactggtagagaatgacatcagtggccttcgtggaatcctaagtgag
ctgacccagtgcaagtcagacctggaggcccacgtggagtctctgaaagatgatctactt
tgccttaagaaaggccatgcagaggaggtcaacctgcttcgtgagcagcttggagatcgg
ctcagcgtggagctggacactgcccccactgtggacctcaacaaagtcctggatgagatg
agatgtcagtatgaaagggtgctagccaacaaccgcagggatgcggaggagtggttcgct
gctcagacagaagagctgaaccagcagcagatgtccagtgcggagcagctgcagggctgc
cagactgagatgctggagttgaagcgcacggccaacgctctggaaattgagctccaggca
cagcaaactctgacggagtctctggagtgtactgtggcagaaaccgaggcccagtaccgc
acacaactggcccaaatgcagtgcctgatcaccaatgtggagcaccagctggctgagatc
cgctgtgacctggagcgtcagaaccaggagtaccaggtgctgctggacatccgggccagg
ctggagtgtgagatcaacacatacaggggcctgctggagaaggaggacagcagactcccc
tgcaatccgggctccacagtctccgtctccaacagcccgtgtgagccgtgttcagcctat
gtgatttgcacagttgaaaactgctgtgcatga
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