Arvicanthis niloticus (African grass rat): 117711154
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Entry
117711154 CDS
T08817
Symbol
Krt39
Name
(RefSeq) keratin, type I cytoskeletal 39
KO
K07604
type I keratin, acidic
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04382
Cornified envelope formation
anu04915
Estrogen signaling pathway
anu05150
Staphylococcus aureus infection
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09150 Organismal Systems
09152 Endocrine system
04915 Estrogen signaling pathway
117711154 (Krt39)
09158 Development and regeneration
04382 Cornified envelope formation
117711154 (Krt39)
09160 Human Diseases
09171 Infectious disease: bacterial
05150 Staphylococcus aureus infection
117711154 (Krt39)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
anu04812
]
117711154 (Krt39)
04147 Exosome [BR:
anu04147
]
117711154 (Krt39)
Cytoskeleton proteins [BR:
anu04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Types I and II: Acidic and basic keratins
117711154 (Krt39)
Exosome [BR:
anu04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
117711154 (Krt39)
Exosomal proteins of other body fluids (saliva and urine)
117711154 (Krt39)
Exosomal proteins of colorectal cancer cells
117711154 (Krt39)
Exosomal proteins of melanoma cells
117711154 (Krt39)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Filament
DUF2115
Gln_amidase_like
Motif
Other DBs
NCBI-GeneID:
117711154
NCBI-ProteinID:
XP_034362501
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All DBs
Position
6:22951454..22959722
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AA seq
481 aa
AA seq
DB search
MDTKGSTVTISSSTPPQNCSGNTNFRTNSSNKSCCHDGPSTGHALQTPQGQGCRPSPCLY
RCPNYLIRTYSFHPYLDDCSWCAEGINSHEKETMQILNERLANYLEKVRLLERENVDLEG
KIQEECSKALPILCPHYLSYYTTIEELQKKILCAKAENSRLVSQIDNTKLAADDLRANYE
AELSLRQLVEADASGLKQILSALTLSKADLEAQVQSLTEELLCLKTNHEEEVNSLQRQLG
ERINIEVTATPSVDLNQILQEMRCQYESIMETNRKDVEEWFNTQMEELNHQVVSSSQQQQ
CCQKDIIELRRTISALEVELQAQHRMRDSQECILTETEARYTALLTQSQSLIHNLEAQVA
DIRGALQRQNQEYEVLLDIKSRLECEIATYRNLLESLDGRLPCNPCATKWEPSCQARTME
CFIPVYTSSSFPGVHKPCRASEPPSRILVKICTITQEIKDGKVISSHEHVQPCYITRPAK
V
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggataccaagggctctacagtaactatttcttcttcgaccccacctcaaaattgctct
gggaatacaaattttaggactaactcttctaacaagagctgttgtcatgatggtccgtca
actggccatgctctacaaactccccaggggcagggctgtcgccccagcccttgcctttat
cgctgccctaactacttgataagaacctacagcttccatccctatctggatgactgcagc
tggtgcgctgaaggcattaacagtcatgagaaagagaccatgcagattttgaacgaacgc
cttgcaaactatctggaaaaggtgcggctgctggaaagagaaaatgtagacctagagggt
aaaatccaggaggagtgcagcaaggcactccccatcctgtgtcctcactacctgtcctac
tacaccaccatcgaggagctgcagaagaagatcttgtgtgccaaggctgaaaattccaga
ctggtctcacaaattgacaacaccaaactggctgcagatgacttgagagccaactatgaa
gccgagttgtccctacgacagctggtggaagccgatgccagtggcctgaagcagatcctc
agtgcactgactctgagcaaggctgacctggaggcacaagtccagtctctgacagaggaa
cttctgtgcctcaaaacgaaccatgaggaggaagttaattccttacagcgccaacttggg
gaaagaatcaacattgaagtaacggctaccccttctgttgacctaaatcaaatcctacaa
gaaatgagatgccagtacgagtccatcatggagacaaaccgtaaagacgtagaagaatgg
ttcaatacacagatggaggaactgaatcaccaagtagtgagcagctctcagcagcagcag
tgctgccagaaggacatcatagagctgagacggaccataagtgccctcgaggttgagctc
caggcccagcaccgaatgagagattcccaggaatgcatcctgacagagacggaggcccgc
tacacagccctgctgacccaaagccagagtctgatccataacctggaggctcaggtggca
gacatccgaggtgccctgcaaagacagaatcaggaatatgaagttctgctagacatcaag
tcccggctggagtgtgagatagccacctaccgcaaccttctggagagcttggacggcagg
cttccctgtaacccatgtgccactaaatgggagccatcatgtcaggccagaactatggag
tgtttcatcccagtttacacatcttcatcattccctggggttcacaagccctgccgtgcc
tctgaacccccatctcggatactggttaagatatgcaccatcacccaggagatcaaggat
ggaaaggtcatttcttctcacgagcatgtgcagccttgctacatcaccagacctgccaaa
gtctag
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