Arvicanthis niloticus (African grass rat): 117711197
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Entry
117711197 CDS
T08817
Symbol
Trim16
Name
(RefSeq) tripartite motif-containing protein 16
KO
K12006
tripartite motif-containing protein 16 [EC:
2.3.2.27
]
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
anu04121
]
117711197 (Trim16)
Enzymes [BR:
anu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117711197 (Trim16)
Ubiquitin system [BR:
anu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117711197 (Trim16)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-B_box
ANCHR-like_BBOX
Motif
Other DBs
NCBI-GeneID:
117711197
NCBI-ProteinID:
XP_034362575
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All DBs
Position
6:complement(58780018..58801838)
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AA seq
554 aa
AA seq
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MAELDLIAPGPLTGVTVHPLAPLGPDPEAVIPVEKEDAGPLSKPDDKTQEQGPDSAPGDE
EEGQILCDFCLGASRVRAVKSCLTCMVNYCEEHLRPHQENSKLHSHQLTEPAKDQDLRTC
PAHHSPLVSFCHTHQQCICQECGEGEHRGDSTVSLDAARKNKEVDLRCMQLDLEQKLKLN
ENAIARLQANHKSVLVSVSEVKVVAEEKFGELLAAVRKAQADVMLFLEEKEQAALNQVNG
IKTHLEHRSIEMERSKQELEKLASISNTVLFLEEYCKLKKTEDTAFPSVYIGLKDKLSGI
RKVITESTLHLIQLLESYKEKLQEFSREEEYDIRTQVSAIVQRKYRTSKPEPKTRDEFLQ
YACDITLDPDTAHRYLRLQEDNRKVTNTTPWEHPYPDLPSRFLYWRQVLSQQSLYLHRYY
FEVEISGAGTYVGLTCKGIDRKGEERNSCISGNSFSWNIHWNGKGFTAWHSDTETPLKTS
PFRRLGIYVNFPGGTLSFYGVEYDAMTLIHKFDCKFSEPVYAAFWLSKKENAIRIVDLGE
EPEKPAVSSVEAAP
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggctgaattggatctgattgccccagggcctctgaccggggtcactgttcaccctttg
gcccctcttggcccagaccctgaggcagttatcccagtagaaaaagaagatgcggggcct
ctcagcaagccagacgacaaaacccaggagcagggtcctgactccgctcctggtgatgaa
gaggaggggcagatcctgtgtgacttctgtctcggggccagcagagtaagggcagtgaag
tcctgtttgacctgcatggtgaattactgtgaggagcacctgcggccacaccaggagaac
agcaaactgcacagccaccagctaaccgaacccgcaaaagaccaggatctgcgtacctgc
cctgcccaccacagccctttggtttctttctgccacacgcaccagcagtgtatctgccag
gaatgtggcgagggtgaacacagaggcgacagtactgtctccctggatgcagcccgtaag
aacaaagaggtggaccttcggtgcatgcagttggacctggagcagaagctcaagttgaat
gaaaatgccatcgccaggctccaagccaaccacaagtctgttttggtgtcggtgtcagag
gtgaaggttgtggctgaagagaagtttggggaactccttgcggctgtgaggaaggcccag
gctgatgtgatgcttttcttagaggagaaagaacaggctgcactgaatcaggtcaatggc
atcaagacccacctggagcacaggagcatcgagatggagagaagcaagcaggagctggag
aagttggcctccatcagcaacactgtgctctttctggaggagtactgcaagcttaagaag
acagaggacactgccttccccagcgtttacatagggctgaaggataaactctcaggcatc
cgcaaggtcatcacagagtcaactctgcacttgatccaattgctagaaagctataaggaa
aagctccaggagttttccagggaagaggaatatgacatcagaactcaagtgtctgccatt
gttcaaagaaaatataggacctcaaaacctgagcccaaaacccgggatgagtttcttcaa
tatgcatgtgacatcacacttgacccagacacagcacacaggtatcttcgcctgcaggag
gacaaccgcaaggtcaccaacaccacgccctgggaacacccctacccggacctccccagt
aggtttctgtactggcggcaggtgctgtcccaacagagcctgtacctgcacaggtattat
tttgaggtggagatctctggagcaggcacctatgttggcctgacctgcaaaggcattgac
cgtaagggggaggaacggaacagctgcatttctggaaacagtttctcctggaacattcat
tggaatgggaagggcttcacagcctggcacagtgacacagagaccccgctcaagaccagc
cccttccggaggcttggcatctatgtaaatttcccaggaggaaccctttccttctatggc
gtagaatatgatgccatgactctgattcacaagtttgactgcaagttctcggagcctgtc
tatgctgctttctggctgtctaagaaagaaaatgccatccggattgtggatctgggagag
gagcctgagaagccagctgtgtcctcagtggaggctgctccctag
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