Arvicanthis niloticus (African grass rat): 117711283
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Entry
117711283 CDS
T08817
Name
(RefSeq) organic cation/carnitine transporter 2 isoform X1
KO
K08202
MFS transporter, OCT family, solute carrier family 22 (organic cation transporter), member 4/5/21
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu05231
Choline metabolism in cancer
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09160 Human Diseases
09161 Cancer: overview
05231 Choline metabolism in cancer
117711283
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
anu02000
]
117711283
Transporters [BR:
anu02000
]
Solute carrier family (SLC)
SLC22: Organic cation/anion/zwitterion transporter
117711283
Major facilitator superfamily (MFS)
Organic acid transporters
Organic cation transporter (OCT) family [TC:
2.A.1.19
]
117711283
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Motif
Pfam:
Sugar_tr
MFS_1
Motif
Other DBs
NCBI-GeneID:
117711283
NCBI-ProteinID:
XP_034362727
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Position
6:67351153..67377728
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AA seq
557 aa
AA seq
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MRDYDEVTAFLGEWGPFQRLIFFLLSASIIPNGFNGMSIVFLAGTPEHRCLVPHTVNLSS
AWRNHSIPLETKDGRQVPHSCRRYRLATIANFSELGLEPGRDVDLEQLEQENCLDGWEYS
KDIFLATIVTEWDLVCKDDWKAPFTISLFFVGVLMGSFISGQLSDRFGRKNVLFLTMAMQ
TGFSFLQVFSVNFEMFTVLFVLVGMGQISNYVAAFVLGTEILSKSVRIIFATLGVCIFYA
FGFMVLPLFAYFIRDWRMLLLALTVPGVLCGALWWFIPESPRWLISQGRIKEAEVIIRKA
AKVNGIVAPSTIFDPNELQDLNSKKPQLHHIYDLVRTRNIRIITIMSIVLWLTISVGYFG
LSLDTPNLHGNIYVNCFLLAAVEVPAYVLAWILLQYLPRRYSISAALFLGGSVLLFIQLV
PSGLFYLSTALVMMGKFGITSAYSMVYVYTAELYPTVVRNMGVGVSSTASRLGSILSPYF
VYLGAYDRFLPYILMGSLTILTAILTLFFPESFGVPLPDTIDQMLRVKGIKQWHIQGQTR
MQKDGEESPTVLKSTAF
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgcgggactacgacgaggtgaccgctttcctgggcgagtgggggcccttccagcgcctc
atcttcttcctgctcagcgccagcatcatccccaatggctttaatggtatgtcgatcgtg
ttcctggcggggaccccggagcaccgttgccttgtgcctcacaccgtgaacttgagcagc
gcgtggcgcaaccacagtatcccgttggagacgaaggacggacgacaggtgcctcatagc
tgccgccgctaccgactggccaccatcgccaacttctctgaactgggactggagccagga
cgggatgtggacctggagcagctggagcaggagaactgcctggatggctgggagtacagc
aaggacatcttcctggccaccatcgtgacagagtgggacctggtgtgtaaggatgactgg
aaggctccattcaccatctccttgtttttcgtgggtgtgctgatgggctccttcatttcg
ggacagctctcagacaggtttggtcgcaagaatgtgctgtttttgaccatggccatgcag
actggtttcagcttcctgcaggtcttctctgtgaacttcgagatgtttaccgtgcttttt
gtccttgttggcatgggtcagatctctaactacgtggcagcatttgtcctgggaacagaa
attctttccaagtcagttcgaattatattcgccaccttaggagtttgcatattttatgca
tttggcttcatggtgctgcctctgtttgcatacttcatcagagactggaggatgctgctg
ctggcgctaactgtgccaggggtgctgtgtggggctctctggtggttcatccctgagtcc
ccccgatggctcatctctcaaggccgaattaaagaggcagaggtgatcatccgcaaagct
gccaaagtcaatgggattgttgcaccttccacaatcttcgatccaaatgagttacaagac
ttaaattccaagaagcctcagttgcaccacatttacgatctggtccgaacacggaatatc
aggatcatcaccatcatgtccatagtcctgtggctgaccatatcagtgggctattttgga
ctttctcttgatactccgaacttgcatgggaacatctatgtgaactgcttcctactggca
gctgttgaagtcccagcctatgtgttggcctggatcttgctgcagtacttgccccggcga
tattctatctctgctgcccttttcctgggtggcagtgtccttctcttcattcagctggtg
ccttcaggattgttttacttgtctactgccttggtgatgatgggcaagtttggaatcacc
tctgcctactccatggtctatgtgtacacagctgagctgtaccccactgtggtcagaaac
atgggtgtgggagtcagctccacagcatcccgccttggcagcatcctgtctccctacttt
gtttaccttggtgcctatgatcgcttcctgccttatatcctcatgggaagtctgaccatc
ctgacagctatcctcaccttgttcttccccgagagctttggtgtccctctcccagacacc
attgatcagatgctaagggtcaaaggaataaaacaatggcatatccaaggccagacaagg
atgcaaaaagatggtgaagaaagcccaacagtcctaaagagcacagctttctaa
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