Arvicanthis niloticus (African grass rat): 117711302
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Entry
117711302 CDS
T08817
Symbol
Tmc6
Name
(RefSeq) transmembrane channel-like protein 6 isoform X1
KO
K21988
transmembrane channel-like protein
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
anu02000
]
117711302 (Tmc6)
03037 Cilium and associated proteins [BR:
anu03037
]
117711302 (Tmc6)
Transporters [BR:
anu02000
]
Other transporters
Pores ion channels [TC:
1
]
117711302 (Tmc6)
Cilium and associated proteins [BR:
anu03037
]
Other cilia and associated proteins
Stereociliary proteins
117711302 (Tmc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
NR_Repeat
Motif
Other DBs
NCBI-GeneID:
117711302
NCBI-ProteinID:
XP_034362756
LinkDB
All DBs
Position
6:4674998..4689242
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AA seq
831 aa
AA seq
DB search
MAQPLALALDVPETTGDEDSLEPSPYEENEVHDSFHRLIQEQSLRVAEEGLELLPLVPGR
GHQTLPGPEGAPVLSTATLRILASMPSRTIGRSRGAIISQYYNRTVRLRRRSSRPLLGNV
LRSARPSLRLYDLELDSTILEEDEKRSLLVKELQGLSVAQRDHMVRNMPLSLGEKRWLRE
KSWSPKGKRRDQQGRRGAFSCCSRLRYSCMLALHSLGLALLSGLYAARPWRYALKQIGGQ
FGSSVLSYFLFLKTLLAFNTLLLLPLLAFLVGVQAAFPPDPAGPVPTFSGLELLTGGGRF
THTVMYYGYYSNTTLSQSCDSPLEGGQCSPRQGSLLYNMPLAYLFTMGATFFITCIVLVY
SMSHSFGESYRVGSTKGIHALTVFCSWDYKVTQKRASRVQQDSICTQLKELLAEWHLRER
PRSVCGQLRQVVVLGLGWLLCLGSTMGCIVAVLTFSEVMIQRPASGHQGVEMLALPLVVS
VLNLGASYLFRGLATLEQHDSPVLEVYTAICRNLILKMAVLGVLCYHWLGRRVAALQGHC
WEDFVGQELYRFMVVDFIFMLLDSLFGEWVWRLISEKKLKRKQKPEFDIARNVLDLIYGQ
TLTWLGVLFSPLLPAVQILRLLLLFHIKKASLMANCQAPRRPWLASHMSTVFLTLLCFPS
FLGAAVFLCYAVWQVRPSSTCGPFRTLNTMYEAGTVWVRRLEHAGSGASWLPWLHHFLVE
NTFFLFLASALLLAVIYLNIQVVRGQRKIIGLLKEQIRNEGEDKIFLINKLHSVYDEEGR
SRSGRTQETTCAIPPSRPKDGGDRKELCNPSHHDPEGRDLDLRSPQDMAVE
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atggctcagccactggctttagccctcgatgtcccggagaccacaggggacgaagatagc
ctggagcccagcccctatgaagagaatgaagtccacgactccttccaccggctcattcaa
gagcagagtcttcgggtggcagaggaagggctggagctactgcccttggttccaggcaga
ggtcaccagaccctcccgggacctgaaggtgcccctgtcctgagcacggccactctccgc
atcttggccagcatgcccagtcgtaccattggtcgcagccgtggggctatcatctcccaa
tactacaaccgcacagtgaggcttcggcgcaggagcagccggcccctgctggggaatgtg
ttgcgctctgcccgacccagccttcgcctgtatgacctggagctggactccacaatcctg
gaggaggatgagaagcggagcctgttagtgaaggagcttcagggtctgtctgtggcccag
agggaccacatggtccggaacatgcccttgagtctgggcgagaagcgatggctgagagag
aaaagttggagcccaaagggaaagcggagggaccagcagggccgccgtggggccttctct
tgctgtagccggctcagatactcctgcatgctggctcttcacagcctggggctggcactg
ctctcaggcctgtatgctgccaggccatggcgctacgctctgaagcagattggtggtcag
tttggctccagcgtcctttcctacttcctcttcctcaagaccctgttggccttcaacacg
ctgctgttgctgcctttgctggccttcctcgtgggtgtgcaggctgcctttccacctgac
ccggcaggccctgtgcctactttctctggtctggaactgctcacaggcgggggccggttc
acacacactgttatgtactacggctactacagtaacaccacgctgagccagtcatgtgac
tcccctctggaaggtggccagtgcagtcccaggcagggcagcctgctctataacatgccg
ctggcctacctcttcaccatgggggccaccttcttcattacctgcatcgttctggtatac
agcatgtcccactcctttggggagagctaccgggttggcagtaccaagggtatccatgct
cttactgtcttctgctcctgggactacaaggtgacacaaaagagggcctcccgtgtccag
caggacagcatctgcactcagctgaaggagctgctggctgaatggcacctgcgggagcgc
cctcggagtgtgtgtgggcagctgaggcaggttgtcgttctaggtctgggatggctgctg
tgtctgggctccaccatgggctgcatagtggctgtcctcaccttctcagaggtaatgatt
cagagacctgcttctggtcaccagggggtggagatgttggccctgcccctcgttgtcagt
gtccttaacctgggtgcctcctacctgttccgtggtctggccactctggagcaacatgac
tctcctgtgttggaggtctacacggccatctgcaggaacctcatcctgaagatggctgtc
ctgggcgtgctttgttatcactggctgggccgcagggtggccgccctgcagggccattgc
tgggaggactttgtgggccaggagctgtaccgcttcatggtcgtggatttcatcttcatg
ctcttggattcccttttcggcgagtgggtgtggaggctcatctcagagaagaagctcaag
aggaagcagaagcctgagtttgacattgccaggaatgtgctggacctgatttatggacag
acactgacctggctgggcgtcctcttctcgcctctcctgcctgcagtgcagattctcagg
ctgctccttcttttccacatcaagaaggcaagcctgatggccaactgccaggcaccacga
cgaccctggctggcctcacacatgagcaccgtcttcctcactctgctgtgcttcccgtca
ttcctgggagcagctgttttcctctgctatgctgtctggcaggtgaggccctcgagcact
tgcggccctttccggactctgaacaccatgtacgaagcaggcaccgtctgggtgcgtcgc
ctggagcatgcaggctccggggcctcgtggctgccctggcttcaccacttcctggtggag
aacactttcttccttttcctggcgtcagccctgctgctggctgtcatctacctgaacatc
caggtcgtgaggggacaacggaagatcatcggcctgctcaaggaacagatccggaacgaa
ggagaggacaagatcttcctcatcaacaagcttcactctgtttacgacgaggagggaagg
agcagatctggcagaacccaggaaactacctgtgccataccaccttcccggcccaaggat
ggaggggacagaaaggaactgtgtaaccccagtcaccatgatcctgaaggcagagacttg
gacctgagatccccacaggacatggcagtagagtga
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