Arvicanthis niloticus (African grass rat): 117711312
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Entry
117711312 CDS
T08817
Symbol
Becn1
Name
(RefSeq) beclin-1 isoform X1
KO
K08334
beclin
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04136
Autophagy - other
anu04137
Mitophagy - animal
anu04140
Autophagy - animal
anu04215
Apoptosis - multiple species
anu04371
Apelin signaling pathway
anu05010
Alzheimer disease
anu05014
Amyotrophic lateral sclerosis
anu05016
Huntington disease
anu05017
Spinocerebellar ataxia
anu05022
Pathways of neurodegeneration - multiple diseases
anu05167
Kaposi sarcoma-associated herpesvirus infection
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
117711312 (Becn1)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117711312 (Becn1)
04136 Autophagy - other
117711312 (Becn1)
04137 Mitophagy - animal
117711312 (Becn1)
09143 Cell growth and death
04215 Apoptosis - multiple species
117711312 (Becn1)
09160 Human Diseases
09172 Infectious disease: viral
05167 Kaposi sarcoma-associated herpesvirus infection
117711312 (Becn1)
09164 Neurodegenerative disease
05010 Alzheimer disease
117711312 (Becn1)
05014 Amyotrophic lateral sclerosis
117711312 (Becn1)
05016 Huntington disease
117711312 (Becn1)
05017 Spinocerebellar ataxia
117711312 (Becn1)
05022 Pathways of neurodegeneration - multiple diseases
117711312 (Becn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
anu04131
]
117711312 (Becn1)
03029 Mitochondrial biogenesis [BR:
anu03029
]
117711312 (Becn1)
Membrane trafficking [BR:
anu04131
]
Autophagy
Autophagosome formation proteins
PI3K complex
117711312 (Becn1)
Mitochondrial biogenesis [BR:
anu03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
117711312 (Becn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
APG6
APG6_N
BH3
MT
DUF3450
HAUS-augmin3
AAA_11
V_ATPase_I
LMBR1
GAS
Exonuc_VII_L
DUF4200
Motif
Other DBs
NCBI-GeneID:
117711312
NCBI-ProteinID:
XP_034362781
EnsemblRapid:
ENSANLG00005007379
LinkDB
All DBs
Position
6:21099000..21112544
Genome browser
AA seq
448 aa
AA seq
DB search
MEGSKASSSTMQVSFVCQRCSQPLKLDTSFKILDRVTIQELTAPLLTTAQAKPGETQEEE
ANSGEEPFIETRQDGVSRRFIPAARMMSTESANSFTLIGEASDGGTMENLSRRLKVTGDL
FDIMSGQTDVDHPLCEECTDTLLDQLDTQLNVTENECQNYKRCLEILEQMNEDDSEQLQR
ELKELALEEERLIQELEDVEKNRKVVAENLEKVQAEAERLDQEEAQYQREYSEFKRQQLE
LDDELKSVENQMRYAQVQLDKLKKTNVFNATFHIWHSGQFGTINNFRLGRLPSVPVEWNE
INAAWGQTVLLLHALANKMGLKFQRYRLVPYGNHSYLESLTDKSKELPLYCSGGLRFFWD
NKFDHAMVAFLDCVQQFKEEVEKGETRFCLPYRMDVEKGKIEDTGGSGGSYSIKTQFNSE
EQWTKALKFMLTNLKWGLAWVSSQFYNK
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggaggggtctaaggcgtccagcagcaccatgcaggtgagcttcgtgtgccagcgctgt
agccagcctctgaaactagacacgagcttcaagatcctggaccgggtcaccatccaggaa
ctcacagctccattacttaccacagcccaggcgaaaccaggagagacccaggaggaagag
gctaactcaggagaggagccatttattgaaactcgccaggatggtgtctctcgaagattc
atccccgcagccaggatgatgtctacagaaagtgctaatagcttcactctgatcggggag
gcatctgatggtggcaccatggagaacctcagccggagactcaaggtcactggagacctt
tttgacatcatgtcgggccagacagatgtagatcacccactgtgtgaggaatgcacagat
actctcttagaccagctggacactcagctcaatgtcactgaaaatgaatgtcagaactac
aaacgctgtttggagatcctggagcaaatgaatgaggatgacagtgagcagctccagagg
gagctgaaggagttggccttagaggaggagaggctgatccaggagctggaagatgtggaa
aaaaaccgcaaggtggtggcagaaaacctggagaaggtccaggctgaggcggagagactg
gaccaggaggaagctcagtaccagcgggaatacagtgaatttaaacggcagcagctggag
ctggacgacgagctcaagagtgtagagaaccagatgcggtatgcccaggtgcagctggac
aagctcaagaaaaccaatgtcttcaatgcgaccttccatatctggcacagtggacaattt
ggcacaatcaataacttcagactgggtcgcctgcccagtgttcctgtggaatggaatgaa
atcaatgctgcctggggccagacagtgctgctgctccatgctttggccaataagatgggt
ctgaaatttcagaggtaccgacttgttccctatggaaatcattcgtacctggagtctctg
acagacaaatctaaggagttgccgttatactgttctgggggattgcgttttttctgggac
aacaagtttgaccatgcaatggtagcttttctggactgtgtgcagcagttcaaagaagag
gtggaaaaaggagagactcgattttgtcttccatacaggatggatgtggagaaaggcaag
attgaagacactggaggcagtggcggctcctattccatcaaaacccagttcaactccgag
gagcagtggacaaaagcactcaagttcatgctcacgaatctgaagtggggtcttgcttgg
gtgtcctcacagttttataacaagtga
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