KEGG   Arvicanthis niloticus (African grass rat): 117711312
Entry
117711312         CDS       T08817                                 
Symbol
Becn1
Name
(RefSeq) beclin-1 isoform X1
  KO
K08334  beclin
Organism
anu  Arvicanthis niloticus (African grass rat)
Pathway
anu04136  Autophagy - other
anu04137  Mitophagy - animal
anu04140  Autophagy - animal
anu04215  Apoptosis - multiple species
anu04371  Apelin signaling pathway
anu05010  Alzheimer disease
anu05014  Amyotrophic lateral sclerosis
anu05016  Huntington disease
anu05017  Spinocerebellar ataxia
anu05022  Pathways of neurodegeneration - multiple diseases
anu05167  Kaposi sarcoma-associated herpesvirus infection
Brite
KEGG Orthology (KO) [BR:anu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04371 Apelin signaling pathway
    117711312 (Becn1)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    117711312 (Becn1)
   04136 Autophagy - other
    117711312 (Becn1)
   04137 Mitophagy - animal
    117711312 (Becn1)
  09143 Cell growth and death
   04215 Apoptosis - multiple species
    117711312 (Becn1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05167 Kaposi sarcoma-associated herpesvirus infection
    117711312 (Becn1)
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    117711312 (Becn1)
   05014 Amyotrophic lateral sclerosis
    117711312 (Becn1)
   05016 Huntington disease
    117711312 (Becn1)
   05017 Spinocerebellar ataxia
    117711312 (Becn1)
   05022 Pathways of neurodegeneration - multiple diseases
    117711312 (Becn1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:anu04131]
    117711312 (Becn1)
   03029 Mitochondrial biogenesis [BR:anu03029]
    117711312 (Becn1)
Membrane trafficking [BR:anu04131]
 Autophagy
  Autophagosome formation proteins
   PI3K complex
    117711312 (Becn1)
Mitochondrial biogenesis [BR:anu03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    117711312 (Becn1)
SSDB
Motif
Pfam: APG6 APG6_N BH3 MT DUF3450 HAUS-augmin3 AAA_11 V_ATPase_I LMBR1 GAS Exonuc_VII_L DUF4200
Other DBs
NCBI-GeneID: 117711312
NCBI-ProteinID: XP_034362781
EnsemblRapid: ENSANLG00005007379
LinkDB
Position
6:21099000..21112544
AA seq 448 aa
MEGSKASSSTMQVSFVCQRCSQPLKLDTSFKILDRVTIQELTAPLLTTAQAKPGETQEEE
ANSGEEPFIETRQDGVSRRFIPAARMMSTESANSFTLIGEASDGGTMENLSRRLKVTGDL
FDIMSGQTDVDHPLCEECTDTLLDQLDTQLNVTENECQNYKRCLEILEQMNEDDSEQLQR
ELKELALEEERLIQELEDVEKNRKVVAENLEKVQAEAERLDQEEAQYQREYSEFKRQQLE
LDDELKSVENQMRYAQVQLDKLKKTNVFNATFHIWHSGQFGTINNFRLGRLPSVPVEWNE
INAAWGQTVLLLHALANKMGLKFQRYRLVPYGNHSYLESLTDKSKELPLYCSGGLRFFWD
NKFDHAMVAFLDCVQQFKEEVEKGETRFCLPYRMDVEKGKIEDTGGSGGSYSIKTQFNSE
EQWTKALKFMLTNLKWGLAWVSSQFYNK
NT seq 1347 nt   +upstreamnt  +downstreamnt
atggaggggtctaaggcgtccagcagcaccatgcaggtgagcttcgtgtgccagcgctgt
agccagcctctgaaactagacacgagcttcaagatcctggaccgggtcaccatccaggaa
ctcacagctccattacttaccacagcccaggcgaaaccaggagagacccaggaggaagag
gctaactcaggagaggagccatttattgaaactcgccaggatggtgtctctcgaagattc
atccccgcagccaggatgatgtctacagaaagtgctaatagcttcactctgatcggggag
gcatctgatggtggcaccatggagaacctcagccggagactcaaggtcactggagacctt
tttgacatcatgtcgggccagacagatgtagatcacccactgtgtgaggaatgcacagat
actctcttagaccagctggacactcagctcaatgtcactgaaaatgaatgtcagaactac
aaacgctgtttggagatcctggagcaaatgaatgaggatgacagtgagcagctccagagg
gagctgaaggagttggccttagaggaggagaggctgatccaggagctggaagatgtggaa
aaaaaccgcaaggtggtggcagaaaacctggagaaggtccaggctgaggcggagagactg
gaccaggaggaagctcagtaccagcgggaatacagtgaatttaaacggcagcagctggag
ctggacgacgagctcaagagtgtagagaaccagatgcggtatgcccaggtgcagctggac
aagctcaagaaaaccaatgtcttcaatgcgaccttccatatctggcacagtggacaattt
ggcacaatcaataacttcagactgggtcgcctgcccagtgttcctgtggaatggaatgaa
atcaatgctgcctggggccagacagtgctgctgctccatgctttggccaataagatgggt
ctgaaatttcagaggtaccgacttgttccctatggaaatcattcgtacctggagtctctg
acagacaaatctaaggagttgccgttatactgttctgggggattgcgttttttctgggac
aacaagtttgaccatgcaatggtagcttttctggactgtgtgcagcagttcaaagaagag
gtggaaaaaggagagactcgattttgtcttccatacaggatggatgtggagaaaggcaag
attgaagacactggaggcagtggcggctcctattccatcaaaacccagttcaactccgag
gagcagtggacaaaagcactcaagttcatgctcacgaatctgaagtggggtcttgcttgg
gtgtcctcacagttttataacaagtga

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