Arvicanthis niloticus (African grass rat): 117711337
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Entry
117711337 CDS
T08817
Symbol
Kcnt1
Name
(RefSeq) potassium channel subfamily T member 1 isoform X1
KO
K04946
potassium channel subfamily T member 1
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
anu04040
]
117711337 (Kcnt1)
Ion channels [BR:
anu04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
117711337 (Kcnt1)
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Motif
Pfam:
Slo-like_RCK
BK_channel_a
Ion_trans_2
TrkA_C
Motif
Other DBs
NCBI-GeneID:
117711337
NCBI-ProteinID:
XP_034362813
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Position
6:106534058..106588862
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AA seq
1225 aa
AA seq
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MARAKLPRSPSEGKAGPGDTPAGAAAPEEPHGLSPLLPARGGGSVGSDVGQRVQVEFYVN
ENTFKERLKLFFIKNQRSSLRIRLFNFSLKLLTCLLYIVRVLLDNPDQGIGCWGCTKYNY
TFNGSSSEFHWAPILWVERKMALWVIQVIVATISFLETMLLIYLSYKGNIWEQIFHVSFV
LEMINTLPFIITVFWPPLRNLFIPVFLNCWLAKHALENMINDFHRAILRTQSAMFNQVLI
LFCTLLCLVFTGTCGIQHLERAGGNLNLLTSFYFCIVTFSTVGFGDVTPKIWPSQLLVVI
LICVTLVVLPLQFEELVYLWMERQKSGGNYSRHRARTEKHVVLCVSSLKIDLLMDFLNEF
YAHPRLQDYYVVILCPSEMDVQVRRVLQIPLWSQRVIYLQGSALKDQDLMRAKMDNGEAC
FILSSRNEVDRTAADHQTILRAWAVKDFAPNCPLYVQILKPENKFHVKFADHVVCEEECK
YAMLALNCICPATSTLITLLVHTSRGQEGQESPEQWQRMYGRCSGNEVYHIRMGESKFFR
EYEGKSFTYAAFHAHKKYGVCLIGLKREENKSILLNPGPRHILAASDTCFYINITKEENS
AFIFKQEEKQKRRGLAGQALYEGPSRLPVHSIIASMGTVAMDLQNTDCRPSQGGSGGGGG
TLTLPTENGSGSRRPSIAPVLELADSSALLPCDLLSDQSEDEVTPSDDEGLSVVEYVKGY
PPNSPYIGSSPTLCHLLPVKAPFCCLRLDKGCKHNSYEDAKAYGFKNKLIIVSAETAGNG
LYNFIVPLRAYYRSRRELNPIVLLLDNKPDHHFLEAICCFPMVYYMEGSVDNLDSLLQCG
IIYADNLVVVDKESTMSAEEDYMADAKTIVNVQTMFRLFPSLSITTELTHPSNMRFMQFR
AKDSYSLALSKLEKQERENGSNLAFMFRLPFAAGRVFSISMLDTLLYQSFVKDYMITITR
LLLGLDTTPGSGYLCAMKVTEDDLWIRTYGRLFQKLCSSSAEIPIGIYRTECHVFSSEPH
DLRAQSQISVNMEDCEDTREAKGPWGTQAASGSGSIHGRHGGSADPVEHPLLCRKSLQWA
RKLSRKSNKQAGKAPVATDWITQQRLSLYRRSERQELSELVKNRMKHLGLPTTGYEDVAN
LTASDVMNRVNLGYLQDEMNDHHQNTLSYVLINPPPDTRLEPNDIVYLIRSDPLAHVASS
SQSRKSSCSNKLSSCNPETRDETQL
NT seq
3678 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgggccaagctgccgcgctcgccgtccgagggcaaggcgggtccgggggacaca
ccagccggcgctgcagcccctgaagagccgcacgggctcagcccgctactgccggcccgc
ggcgggggctccgtgggcagcgacgtgggccagagggttcaggtggagttctatgtcaat
gagaacaccttcaaagaacggctcaaactgttcttcatcaaaaaccaaagatccagcctg
aggatccggctgttcaacttctccctcaagctcctcacctgcctgctgtatatcgtccgt
gtcctgctcgacaacccagaccagggcatcggatgctggggctgcacgaagtataactac
actttcaatggctcgtcctctgagttccactgggctcccatcctgtgggtggagaggaaa
atggcactgtgggtgatccaggtcattgtggccacaataagcttcttagagaccatgctc
ctcatttacctcagctacaaaggcaacatctgggagcagatcttccatgtgtcttttgtc
ttggagatgatcaacacactgcccttcatcatcacggtcttctggccacctcttcggaac
ctgttcatccctgtgtttctcaactgctggctggccaagcatgcgctggagaacatgatc
aatgacttccaccgtgccatcctgcgtacacagtcagccatgttcaaccaggtgctcatc
ctgttctgcaccctgctgtgcctggtcttcacagggacctgtgggatccagcacctggag
cgggcaggcggcaacttgaacctgctgacctccttctacttctgcattgtgactttctca
accgtgggcttcggtgatgtgacgcccaagatctggccatcccagctcctggtggtcatc
ctgatctgtgtcaccctcgtggtgctcccactgcagtttgaagagcttgtctacctctgg
atggagcggcagaagtcagggggcaactatagccgccaccgagcacggacagagaagcat
gtggtcctgtgtgtgagttccctcaagatcgatctcctcatggattttctgaatgagttc
tatgcccacccccggctccaggactactacgtggtcatcctgtgtccctctgaaatggat
gtccaggtacgcagggtactgcagattcccctgtggtcccagcgggtcatctacctccag
ggctctgccctcaaggaccaggacctcatgagagccaagatggacaacggagaggcctgc
tttatcctcagcagcaggaatgaggtggaccgcacagctgcggatcaccagactatcctt
cgagcctgggctgtgaaggactttgcccccaactgccccctctatgtccagatcctcaag
cctgagaacaagtttcacgtcaaatttgctgaccacgtggtgtgcgaggaagagtgcaag
tatgccatgctggccctgaactgcatctgcccggccacctccaccctcatcaccctgctg
gtgcacacgtcccgtggccaggaaggacaggagtctccagagcagtggcagcgcatgtat
ggacgctgctcgggcaacgaggtgtaccacattcgcatgggtgaaagtaaattcttccgg
gagtacgagggcaagagcttcacctacgcagccttccacgcacacaagaagtatggggtg
tgcctcattgggctgaagcgtgaggagaacaagagcatcctgctgaacccagggccacgg
cacatcctggccgcctcggacacctgcttctatatcaatattaccaaggaggagaactca
gctttcatcttcaagcaggaggagaagcagaagaggcggggtcttgcagggcaggcactt
tacgaagggccctcccggctcccggtgcatagcatcatagcctctatggggacagtggcc
atggacctgcagaacacagattgccggccctcccagggtggcagtggtgggggcggcggc
acgctgactctgcccaccgagaacggctccggtagtcggcgccccagcatcgcaccagtt
ctggagttggcagacagctcagccctgttgccctgcgacctgctaagtgaccagtcagag
gatgaggtgacgccctcagacgacgaggggctctctgtggttgagtatgtgaagggctac
ccccccaactcaccctacattggcagctccccgactttatgccacctcctgccggtgaaa
gcccccttttgctgcctgcggctagacaagggctgcaaacacaacagctatgaggatgcc
aaggcctacgggttcaagaacaagctgattattgtctctgctgagacggcaggcaacggg
ctctacaacttcattgtgcctctgcgtgcctactaccggtcccgccgggagctcaacccc
attgtgttgctgcttgacaacaagcctgaccaccacttcctggaggccatctgctgcttc
cccatggtctactacatggaggggtccgtggacaacctggacagcctgctgcagtgcggc
atcatctatgctgacaacctggtagtggtggacaaggagagtaccatgagtgccgaagag
gactacatggcggatgccaagaccattgtcaatgtgcagaccatgttccggcttttcccc
agtctcagcattaccacggagctcacacacccttccaacatgcgcttcatgcagttccgt
gccaaggacagctactctctggctctttccaaacttgaaaagcaagaacgggagaatggc
tccaacctggccttcatgttccgcctgccgtttgctgctggccgagtgtttagcatcagc
atgttggacacgctgctctaccagtccttcgtgaaggactacatgatcaccatcaccagg
ctgctgttgggccttgacactacaccaggctccggctacctctgtgctatgaaggtaact
gaggatgacctgtggatccgtacttacggccgcctcttccagaaactctgctcctccagt
gctgagatccctattggcatctacaggaccgagtgccacgtcttctcctctgagccccat
gacctcagagcccagtctcagatctcggtgaacatggaggactgcgaggacactcgggag
gccaaggggccctggggcacacaggctgcatctggcagtggcagcatccacggccgtcac
gggggcagtgctgacccagtagagcacccactactgtgccgcaagagtctgcagtgggcc
cgcaagctgagtcgcaagagcaacaagcaggcggggaaggcacccgtggccacagactgg
atcacccagcagcggctcagcctgtaccggcgctcagagcgccaggagctctcggagctg
gtcaagaaccgaatgaagcacctggggctgcccaccaccggctatgaggacgtagcaaat
ttaacagccagtgatgtgatgaatcgggtaaacctgggatatttgcaagacgagatgaat
gatcatcaccagaataccctttcctatgtactcatcaaccccccgccagacacaagactg
gaacccaacgatattgtgtacctcatccgttccgaccccctggcccatgtggccagcagc
tcccagagtcggaaaagcagctgcagcaacaaactctcatcctgtaatcctgagacccgg
gatgagacccagctctga
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