Arvicanthis niloticus (African grass rat): 117711409
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Entry
117711409 CDS
T08817
Symbol
Sgca
Name
(RefSeq) alpha-sarcoglycan
KO
K12565
alpha-sarcoglycan
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04820
Cytoskeleton in muscle cells
anu05410
Hypertrophic cardiomyopathy
anu05412
Arrhythmogenic right ventricular cardiomyopathy
anu05414
Dilated cardiomyopathy
anu05416
Viral myocarditis
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117711409 (Sgca)
09160 Human Diseases
09166 Cardiovascular disease
05410 Hypertrophic cardiomyopathy
117711409 (Sgca)
05412 Arrhythmogenic right ventricular cardiomyopathy
117711409 (Sgca)
05414 Dilated cardiomyopathy
117711409 (Sgca)
05416 Viral myocarditis
117711409 (Sgca)
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Motif
Pfam:
Sarcoglycan_2
Sarcoglycan_2_C
Motif
Other DBs
NCBI-GeneID:
117711409
NCBI-ProteinID:
XP_034362928
EnsemblRapid:
ENSANLG00005008246
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Position
6:27424959..27440491
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AA seq
387 aa
AA seq
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MAAAVTWIPLLAGLLAGLRDIKAQQTTLHPLVGRVFVHPLEHATFLRLPEHIEVPPTVRL
TYHAHLQGHPDLPRWLHYTQRSPYNPGFLYGTPTPEDRGHQVIEVTAYNRDSFDTTRQRL
LMIVGDPEGPRLPYQAEFLVSSHDVEEVLPSTPANRFLTALGGLWEPGELQLLNITSALD
RGGRVPLPIEGRKEGVYIKVGSATPFSTCLKMVASPDSYARCAQGQPPLLSCYDTLAPHF
RVDWCNVSLVDKSVPEPLDEVPTPGDGILEHDPFFSPPTEATGRDFLTDALVTLLVPLLV
ALLLTLLLAYIMCCRREGRLKRDMATSDIQMFHHCSIHGNTEELRQMAASREVPRPLSTL
PMFNVRTGERLPPRVDSAQMPLILDQH
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atggcagcggcagtaacttggattcctctccttgcaggtctcctggcagggctgagggac
atcaaggcccagcagacaactttacacccactcgtgggccgtgtgtttgtgcatcctttg
gaacacgctaccttcctgcgccttccagaacacattgaggtgccacccactgtccgactc
acctatcatgctcacctccagggacatccagacctgcccaggtggctgcactacacacag
cgcagtccctataaccctggcttcctctatggcacccccactccagaagatcgtgggcac
caagtcatcgaggttacagcctacaatcgggacagctttgacaccactagacagaggctg
ctgatgatagttggggaccctgaaggtccccggttgccgtaccaagctgagttcctggtg
agcagccatgatgtggaggaggtgctgccctccacacctgccaaccgcttcctcaccgcc
ttggggggactctgggagccaggcgagctccaattgctcaacatcacttctgccttggac
cgtggaggccgagtccctcttcctattgagggccggaaggaaggggtatacattaaggtg
ggctctgccacacccttctccacctgcctgaagatggtggcatcacctgacagctatgcc
cgttgtgcccagggacagcctccactactgtcctgctatgacaccttggcaccccacttc
cgtgttgactggtgcaatgtgtctctggtagacaagtcagtgccagagcccctggatgag
gtgcctactccaggggatggaatcttggagcacgatccattcttcagcccacccactgaa
gccacaggccgagacttcctaacagatgctttggtgaccctcttggtgcccttgctggtg
gctctgctgctcaccctgttgctggcttacatcatgtgttgtcggcgtgaaggacggttg
aagagagacatggccacctctgacatccagatgtttcaccactgttccatccatgggaat
acagaagagcttcggcagatggcagccagccgtgaggtgccccggcccctttctaccttg
cccatgttcaatgtgcgtacaggagagcggctacctccccgagtagacagcgcacagatg
cccctcatcctggaccagcactga
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