Arvicanthis niloticus (African grass rat): 117711538
Help
Entry
117711538 CDS
T08817
Symbol
Supt6h
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
anu03021
]
117711538 (Supt6h)
03036 Chromosome and associated proteins [BR:
anu03036
]
117711538 (Supt6h)
Transcription machinery [BR:
anu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
117711538 (Supt6h)
Chromosome and associated proteins [BR:
anu03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
117711538 (Supt6h)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Tex_central_region
Spt6_S1
HHH_3
S1
HHH_9
S1_RRP5
SH2
Tex_YqgF
Tex_N
Motif
Other DBs
NCBI-GeneID:
117711538
NCBI-ProteinID:
XP_034363162
LinkDB
All DBs
Position
6:43617744..43654151
Genome browser
AA seq
1726 aa
AA seq
DB search
MSDFVESEAEESEEEYNHEGEVVPRVTKKFVEEEDDDEEEEEENLDDQDERGNLKDFIND
DDDEEEGEEDEGSDSGDSEDDVGHKKRKRTSFDDRLEDDDFDLIEENLGVKVKRGQKYRR
VKKMSDDDEDDEEEYGKEEHEKEAIAGEIFQDEEGEEGQEAVEAPMAPPDEEEEDDEESD
IDDFIVDDDGQPLKKPKWRKKLPGYTDAALQEAQEIFGVDFDYDEFEKYNEYDEELEEDY
EYEDDEAEGEIRVRPKKTTKKRVSRRSIFEMYEPSELESSHLTDQDNEIRATDLPERFQL
RSIPVKAAEDDELEEEADWIYRNAFATPAISLQDSCDYLDRGQPTSSFSRKGPSTVQKIK
EALGFMRNQHFEVPFIAFYRKEYVEPELHINDLWRVWQWDEKWTQLRIRKENLTRLFEKM
QAYQYEQISADPDKPLADGIRALDTTDMERLKDVQSMDELKDVYNHFLLYYGRDIPKMQN
AAKASRKKLKRIKEDGDEEGEGEEAEDEEQRGPELKQASRRDMYTICQSAGLDGLAKKFG
LTPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPTPEAVLEGARYMVALQIAREP
LVRQVLRQTFQERAKLNITPTKKGRKDVDEAHYAYSFKYLKNKPVKELRDDQFLKIGLAE
DEGLLTIDISIDMKGVEGYGNDQTYFEEIKQFYYRDEFSHQVQEWNRQRTMAIERALQQF
LYVQMAKELKNKLLAEARESVVKACSRKLYNWLRVAPYRPDQQVEEDDDFMDENQGKGIR
VLGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRTAWREEEREKKAQDIETLKKFL
VNKKPHVVTVAGENRDAQMLIEDVKRIVHELDQGQQLSSIGVELVDNELAILYMNSKKSE
AEFRDYPPVLRQAVSLARRIQDPLIEFAQVCSSDEDILCLKFHPLQEHVVKEELLNALYC
EFINRVNEVGVDVNRAIAHPYSQALIQYVCGLGPRKGTHLLKILKQNNTRLESRTQLVTM
CHMGPKVFMNCAGFLKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESA
EDANPAGALEEILENPERLKDLDLDAFAEELERQGYGDKHITLYDIRAELSCRYKDLRTA
YRSPNTEEIFNMLTKETPETFYIGKLIICNVTGIAHRRPQGESYDQAIRNDETGLWQCPF
CQQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVTGFIPTKFLSDKVVKRPEERVKVG
MTVHCRIMKIDIEKFSADLTCRTSDLMDRNNEWKLPKDTYYDFDAEAADHKQEEDMKRKQ
QRTTYIKRVIAHPSFHNINFKQAEKMMETMDQGDVIIRPSSKGENHLTVTWKVSDGIYQH
VDVREEGKENAFSLGATLWINSEEFEDLDEIVARYVQPMASFARDLLNHKYYQDCSGGDR
KKLEELLIKTKKEKPTFIPYFICACKELPGKFLLGYQPRGKPRIEYVTVTPEGFRYRGQI
FPTVNGLFRWFKDHYQDPVPGITPSSSSRTRTPASINATPANINLADLTRAVNALPQNMT
SQMFSAIAAVTGQGQNPNATPAQWASSQYGYGGSGGGSSAYHVFPTPAQQPVATPLMTPS
YSYTTPSQPITTPQYHQLQASTTPQSTQAQPQPSSSSRQRQQQPKSNSHAAIDWGKMAEQ
WLQEKEAERRKQKQRLTPRPSPSPMIESTPMSIAGDATPLLDEMDR
NT seq
5181 nt
NT seq
+upstream
nt +downstream
nt
atgtctgactttgtggaaagtgaggccgaagagtcagaagaagaatacaatcatgaaggc
gaggtggtacctagagtcaccaagaagtttgtggaagaggaggatgatgatgaggaggaa
gaagaggagaatctagatgaccaggatgagcgaggcaacctaaaagacttcatcaatgat
gatgatgatgaagaggaaggagaggaggatgaaggcagtgactctggtgactcagaagac
gatgttggccacaagaagagaaaacgcacgtcttttgatgaccgcctggaagatgatgat
tttgacctcattgaggagaatttgggtgttaaagtcaaacgaggacaaaaataccgacgt
gtcaaaaaaatgtctgacgatgatgaagatgatgaagaggaatatggcaaggaagaacat
gagaaggaggccattgcgggggaaatcttccaagatgaagaaggggaagaagggcaggag
gctgtagaggcccccatggctcctccagacgaggaggaggaagatgatgaagagtcagat
attgacgatttcattgtggatgatgatggacagcctctgaaaaaacccaaatggcgaaaa
aagcttcctggatatacagatgcagccctgcaagaagcccaggagatctttggtgtggac
tttgactatgatgagtttgagaaatacaatgaatacgatgaagaactggaggaagactat
gagtatgaggatgacgaggctgaaggtgagatccgagtacgccccaagaagaccaccaag
aaacgtgtgagtcgcagaagcatctttgaaatgtatgagccaagtgaactggagagcagc
catctcacagaccaggacaatgaaatccgagccactgacttgcctgagaggttccagctc
cgctccatcccagtcaaggccgctgaagatgatgagctagaagaagaagctgactggatc
tataggaatgcctttgcaacaccagccatctccctccaggacagctgtgattacctagac
cgtgggcagccaactagtagcttcagtcggaaagggcccagcacagttcagaagattaaa
gaggccctgggcttcatgcggaatcagcattttgaggtgccttttattgccttctaccga
aaagaatacgtggaacctgagttgcacatcaatgacctgtggagggtgtggcagtgggat
gagaagtggactcagctgagaatccgcaaagagaacctaacacggctgtttgagaagatg
caggcttatcagtatgagcagatctctgctgaccctgacaaacctcttgctgatggcatc
cgggctttagatactacagacatggagaggctcaaagatgtgcagtcaatggatgaactg
aaagatgtctacaaccatttcttactttactatggccgtgacatccccaagatgcagaat
gctgccaaggctagccggaagaagctgaaacgcataaaggaggacggcgatgaagaaggt
gaaggtgaggaggctgaagatgaggagcagaggggaccagagctcaagcaagcctcccgt
cgagacatgtacaccatctgccagagtgccgggctagatggcctggccaaaaagtttggc
ctcacacctgagcagtttggggagaacctccgtgacagttaccaacggcatgagacagaa
cagttccctgcagagcctttggagctggccaaagattacgtttgcagccagttccctaca
ccagaagctgtgcttgaaggtgcccgatacatggttgcactgcagattgcccgggagcct
cttgtcagacaggtgctgagacaaacctttcaggagagagccaagctaaacataacccca
accaagaaaggtagaaaggatgtggatgaggcccactatgcttattcttttaagtactta
aagaacaagcctgttaaagagctaagagacgaccagttcctcaagataggcctagctgaa
gatgaaggtctgctcaccattgacatcagcattgatatgaagggggtggaagggtatggc
aatgaccagacatattttgaggaaatcaagcagttttactaccgggatgaattcagccac
caagtacaggaatggaaccggcagcgcactatggccattgagcgagctctgcagcagttc
ctctacgtgcaaatggccaaagaacttaaaaacaagctgctggctgaggccagggagagt
gttgtaaaggcctgtagccgaaagctctataactggttgagagtggcgccctaccgacca
gatcagcaggtggaggaggatgacgactttatggatgagaaccaggggaagggcatccga
gtcctaggcattgctttctcctctgccagagatcaccctgtgttctgtgccctagtcaat
ggtgaaggagaagtgactgatttcctccgtctgccccattttaccaaacggcgaactgca
tggagagaagaggagcgggaaaagaaggctcaagatattgaaaccctaaagaagtttctt
gtaaataagaagcctcatgtggttactgtcgcaggagaaaacagggatgcccagatgttg
attgaggatgtgaagcgcatagtgcatgagctggaccaaggccaacagctttcttctatt
ggggtggagctggttgacaatgagttggccattctgtatatgaacagcaagaaatcagag
gcagagttccgggattatccaccagttttgagacaagctgtctctctagcccggcgcatc
caagaccctctgatagaatttgcccaggtgtgcagctctgatgaagacatcctgtgtctc
aagtttcatcccttgcaggagcatgttgtgaaagaggagctgctcaacgccttatactgt
gaattcatcaatcgggtcaatgaggtcggagttgatgtcaaccgtgccatcgcccatcct
tacagccaggccttgatccagtatgtctgtggcctgggacctcgaaaagggacccacctg
ctgaagatcttgaaacagaacaacactcgactcgagagccggactcagctggtcaccatg
tgtcatatgggtcccaaagtcttcatgaattgtgctggctttctcaagatcgacactgcc
tctctgggggacagcactgactcatacattgaagttcttgatggctctcgagtccaccct
gaaacttacgagtgggccaggaagatggcagtggatgccttggaatacgatgagtctgct
gaggatgccaatcctgcaggagcccttgaggaaatcttggaaaacccggagcgactgaag
gatttagaccttgatgcctttgcagaagaactagagagacagggctatggtgacaagcac
atcacactttatgatatccgagcagagctcagttgtaggtataaggacctccggacagcc
taccgctctcctaacacagaggagatcttcaatatgttaaccaaagagactccagagacc
ttctacattgggaagctcatcatctgtaatgttactggcattgctcacaggcgcccacag
ggtgagagctatgaccaggctatccgaaatgatgagacagggctgtggcagtgccccttc
tgtcaacaggacaacttccctgagctaagtgaggtctggaaccattttgacagtggatca
tgccctggccaggccattggtgtgaaaacacgcctagacaacggtgtcaccggctttatc
cctaccaaatttctcagtgacaaggtggtgaagaggccagaggagcgagtgaaggtgggg
atgactgttcactgccgtatcatgaagatcgatattgaaaagttcagtgcagacctgacc
tgccggacctcagacctcatggatagaaacaatgagtggaaactgcccaaggacacctac
tacgactttgatgctgaagctgcagaccacaaacaagaagaagacatgaaacgaaagcag
cagcggaccacatacatcaagcgagtgattgcgcacccgtccttccataacataaatttc
aagcaagcagaaaagatgatggagaccatggaccaaggggatgttatcatccggcccagc
agcaagggtgaaaaccacctgacagtgacctggaaagtcagcgacggcatctaccagcat
gtggatgtgcgcgaagagggcaaggagaatgccttcagcctgggagccactctgtggatc
aacagtgaggaatttgaagacttggatgagatcgttgcccgctatgtccagcccatggct
tcctttgctcgagaccttctgaaccacaagtattaccaggactgtagtggtggggaccga
aagaaattagaggagctgctcatcaaaactaagaaggagaagcccaccttcatcccttac
ttcatctgtgcctgcaaggaactgcccggcaagttcctcctgggataccagccccgaggg
aaacccaggatagaatatgtgacagtgactcctgaaggattccggtaccggggccagatc
ttcccaactgtgaatggactcttccggtggtttaaggatcactatcaggaccctgtgcca
ggcatcactcccagtagcagcagcagaacacggacccccgcttctatcaatgctacccca
gccaacatcaatcttgcggatctgacacgggctgtgaatgccttgcctcagaacatgact
tcacagatgttcagtgccattgctgctgtgacaggccaaggacagaaccccaatgctacc
ccagcccagtgggcatccagccagtatggctatggtggcagcggaggaggcagcagcgct
taccatgtgttcccaacgccagcccagcagccagtggccacaccactaatgaccccaagc
tactcctatacaaccccgagtcagcccattaccaccccacaataccaccagctccaggcc
agcactaccccacagtctacccaggcccagccccagccttcctccagctcccgacaacgg
caacagcagccaaagtccaacagccatgcagctatcgactggggcaagatggccgagcaa
tggctacaggaaaaggaggcagaacgacggaaacagaaacagcggctgaccccacgaccc
tctcccagccccatgatcgagagcacccccatgtccattgctggcgatgcgaccccactc
ctggacgagatggatcggtag
DBGET
integrated database retrieval system
