Arvicanthis niloticus (African grass rat): 117711555
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Entry
117711555 CDS
T08817
Symbol
Abca6
Name
(RefSeq) ATP-binding cassette sub-family A member 6
KO
K05649
ATP-binding cassette, subfamily A (ABC1), member 6
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
117711555 (Abca6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
anu02000
]
117711555 (Abca6)
Transporters [BR:
anu02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
117711555 (Abca6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
RsgA_GTPase
AAA_29
nSTAND1
AAA_22
MMR_HSR1
AAA_23
UBD
Motif
Other DBs
NCBI-GeneID:
117711555
NCBI-ProteinID:
XP_034363183
LinkDB
All DBs
Position
6:12188354..12246628
Genome browser
AA seq
1621 aa
AA seq
DB search
MKELSVHQQTRALLHKNLLKKWRMKRESLLEWSIPIIIGLYMGLLSYFKENDRVPEVPPQ
NLGSIDEFNGSYIMVVYTPISNITQQIMNKTTFATTMKGTKIIGVPSKKELDEVFLENMP
HAIGVIFNDTFSYKLKIHQMYGNPFLKEDLSAHCWDAYTYVYCRLTKYWKGGFVALQTAI
NAAIIEVTTNHSVMKELMSVNAISMKTLPFITKDIFQYEIFILFCLLYFSSFVYFASRNV
TKERKHNKELMKVMGLQDSAFWLSWGLIYVGFIFIMSIFIAIIIKSNQIIVMTGFLVIFT
LFFLYGLSLIAVTFLMAVLLQKAVFTNLIVFLFTLFWGCVGLTVLHKELPSSLEWVLSAF
SPFAFTSGMAKIIFLDYNLNGVVFPDPSGESYVMIAVFSILAFDGLLYLVLALYFDKILL
YGAEHRYAPLFFLNSTSCFRKVTTRNKVIERDLDPELPSDEYFEPVHPEYQGKEAIRIRN
IKKEYKGKSGKVEALKGVFFDIYESQITAILGHSGAGKSSLLNILSGLCVPTAGSVTVYN
KDLSEMQDLKEIRKMIGVCPQHNVQFDALTVKENLTLFAKIKGILPQDVEQEVQQITLEL
DMQNIRDDLAEHLSEGQKRKLTFGIATLGDPRILLLDEPTVGLDPFSRQRIWGFLKERRA
DRVILFSTQFTDEADILADRKVIISNGTLKCTGSSVFLKRKWGLGYHLSLFMNETCDPEQ
LSSLIHHHIPDAKLKAKAKEKLVYVLPLDRTSKFPEFFSDLDKYSGQGLMNYEVSMSTLN
EVFVNLEGEPSTTRDFEKRETETDSGSLNEMEVVYSSLSQVQKTVGAMSRWRMQVCAVAK
LRILKLKRERKAFLIILLFLGIALLPLIMEIMANAWIEEKNDWEFTTDLYFLSPGQLPQG
LRTSLLVINNTESNIEDFVQSLRHQNIVLEVDDFENRNGTESISYNGAIIVSGRQKDYRF
SAVCNTKRLHCFPILMNVVSNGILHMFNHSQYIRIEEDIFSTDIVIVWFGILEAFLFVLF
VVCSLAPHIAMSSVSDYKKKADSQLWISGLYPSAYWCGQAVVDITLFSGILLTSYFTLYT
TKLMHIHLTSKIVLSIIFLAFGCAASLVFLTYVISFVFGKRKKNSGLWSICFFLVITIIF
DRVMIDLFREAVLISAMILVPSFSLNALLIVLELRAYQYYEEFGEVKYALSGVDLLICLI
PYVHTLLFIFVLRCLELKYGKNVVQKDPIFRISPRNLNVQPNPEEPIDEDEDVQAERLRT
SDALSTLNLNEKPVIIVSCLHKEYAGQKKRCCSKRTKKVAVRNISFCVNKGEILGLLGPD
GAGKSSSIRMIAGITKPTAGEVEVKGLSSAVGHQGQGTEFGYCPQENVLWPILTVKEHLE
LYAAVKGLRKEDAVIAISRLANAFKLHDQLNVQAQNLVAGVTRKLCFALSILGNSPVLIL
DEPSTGLDVSGKQQVWQTIQAAVRDNEKGVLLSTHDLAEAEALCDRAAIMVSGRLRCIGS
IQHLKRKFGKDYVLELRVKEISQEPLVHREILKLFPQAARQDRCFSLLTYKIPVTDVHPL
SQAFHKLEAVKHGFNLEDYSLSQCTLDRVFLELSKEQELGDVQEEADTTMRRRLLPPSDE
L
NT seq
4866 nt
NT seq
+upstream
nt +downstream
nt
atgaaggagctaagtgtgcaccagcagacccgagcgcttctgcacaagaatctgctcaag
aaatggcggatgaagagagagagcttattggaatggagcattccaattattataggactg
tatatgggtctgctttcctatttcaaagaaaatgatcgtgtccctgaagtccctcctcag
aatcttggaagtatagatgaatttaatggatcttatataatggttgtatatacaccgatc
tctaacataacccaacagataatgaataaaacaacatttgctacaactatgaaaggaaca
aaaatcattggggtaccaagtaaaaaagagttggatgaagtgtttctggagaatatgcca
catgctattggagttatatttaatgacacattctcttacaagttaaaaatacaccaaatg
tatggaaacccatttttgaaagaggacttatcagctcattgctgggatgcgtatacttac
gtttactgtagactgaccaaatactggaaaggagggtttgtggccttacaaactgccatt
aatgctgcaattatagaagtcaccacgaaccactccgtgatgaaggagttaatgtctgtt
aacgccatcagtatgaagacattaccttttattaccaaagacatttttcagtatgaaatt
tttatcttgttctgcttgctttacttctcctcatttgtctattttgcatcacgcaatgtc
actaaagagagaaaacacaataaggagctcatgaaagtcatggggctgcaagactctgca
ttctggctgtcctggggcctaatctatgttggcttcatctttatcatgtccatattcatt
gcaattatcataaagtctaaccagattatagtgatgactggtttcctggtcatctttaca
ctgtttttcttatatggattatctttgatagctgtaactttcctgatggctgttctgcta
cagaaggctgtcttcaccaacctaattgtatttctctttaccctcttttgggggtgtgtg
gggctcactgtactgcacaaagaactcccctcgtctctggaatgggttctgagcgcattc
agcccctttgccttcacgtctgggatggctaagattatcttcctggattataatttgaat
ggtgtcgtattccctgacccctcaggagaatcatatgtaatgatagcagtattttccata
ttggcttttgatggtcttctctacttggttttggccctgtattttgacaaaatcttgctc
tacggagccgagcacaggtatgctccactttttttcttgaattcaacatcttgttttcga
aaagtgactacgagaaacaaggtcattgagagagacctagaccccgagcttccctcggat
gaatattttgagccagtacatccagaataccaagggaaagaagccatcagaataagaaat
attaaaaaagaatataaaggaaagtctgggaaagtggaggccttgaaaggcgtgttcttt
gatatttatgagagtcaaatcacagcaattctgggccacagtggagcgggcaaatcttca
ttactcaacatcctcagtggattatgtgttccaactgcagggtcagtcacagtctacaat
aaagatctctctgaaatgcaagacttgaaggaaatcagaaagatgattggtgtttgtccc
caacataatgttcaatttgatgcactcactgtgaaggaaaatctcaccctctttgctaaa
ataaaagggattcttccacaggacgtagagcaagaggtgcaacaaatcacattggaatta
gacatgcagaatattcgggatgatcttgccgaacatttaagtgaaggacagaagagaaag
ctcacctttgggattgccactctaggagatcctcgaattttgctcttagacgaacctact
gtaggactcgatcccttttcgaggcagcggatatggggtttcctgaaggaacgcagggca
gaccgcgtgatcctcttcagcactcagttcacggatgaggcggacatccttgccgacagg
aaagtgatcatctccaacgggactctcaagtgcacagggtcttctgtctttctgaagaga
aaatggggtcttggatatcacttaagtttgtttatgaacgaaacatgtgacccggagcag
ttatcatccctcatccatcaccacatccccgatgctaaattaaaagcaaaagccaaagaa
aagcttgtgtacgttttgccactggacaggacaagcaagttcccagagttcttcagtgat
cttgataaatattctggccagggcttgatgaattatgaagtttccatgtcaactctgaat
gaagtctttgtgaacctggaaggagaaccaagtaccacacgggactttgagaaaagagaa
acagaaacagactcaggaagtttaaatgaaatggaggtggtttactcttctctctctcaa
gtacagaagacagtgggcgctatgagccgctggagaatgcaggtctgtgccgtagcaaag
cttcgcatcttaaaactaaaacgagagagaaaagcatttttgatcattctactgtttctt
ggaattgcactgctcccactgattatggaaatcatggctaatgcttggatagaggaaaaa
aacgactgggaatttacaacagacttgtatttcctgtctcccggacaactcccccagggt
ctgcgaaccagccttttggtcatcaataacacagaatcaaatattgaagattttgtacag
tcgctgaggcatcaaaacatagttttggaagtagatgactttgaaaacagaaatggtact
gaaagcatttcctacaatggagccattatagtttctggaagacagaaggattacagattt
tcagctgtgtgtaataccaagaggctacactgctttcctatactaatgaatgtcgtcagc
aatggaatccttcatatgttcaatcattcccagtacattagaattgaggaagatatattt
tcaacagacatcgtgatagtttggtttgggatactggaagctttcctgttcgtactgttt
gttgtctgcagcctcgcgccacatatcgccatgagcagcgtcagtgattataaaaaaaaa
gctgactcccaactgtggatttctggcctttacccttctgcctactggtgtgggcaggca
gtagtggacattaccctcttcagcgggattcttctcacaagctacttcacattatacacg
acaaaactgatgcacattcacttgacaagcaaaattgtgctatctatcatttttcttgca
tttggctgtgcagcttctcttgtcttcttgacatatgtgatatcatttgtttttggcaaa
aggaaaaaaaacagtggcctctggtcaatttgcttttttcttgtcataaccattatattt
gacagagttatgattgacctcttcagagaagcagtgcttatttctgccatgatattagtt
ccttccttttcgttgaatgcactcctgattgtcttggaactgagagcctaccagtactac
gaagaatttggagaagtcaaatatgctttatctggggttgatcttctgatatgcctgata
ccttacgttcatactttgctgttcatttttgtcctgagatgtctggaactgaaatacggg
aagaatgtggtacagaaggatcccatcttcaggatatctccacgaaatctaaatgttcag
ccaaatccagaggaaccaatagatgaagacgaagacgttcaagcagaaagactgaggaca
tctgatgctctgagcactctgaacttaaatgagaaaccggtcataatcgtcagctgtctg
cacaaagagtacgcaggtcagaagaaacgttgttgttcaaagaggacaaagaaagtggca
gtgaggaacatctctttttgtgttaataaaggggaaattttgggattgctaggacccgat
ggtgctggtaaaagttcctctatcaggatgatagctgggatcacaaagccaacagctgga
gaggtggaagtgaaaggtttaagttcagctgtgggtcaccagggccagggcacagagttt
ggatactgccctcaggagaacgtgctatggcccatcctcacggtgaaggagcacctggag
ttgtatgctgccgtgaaggggctgaggaaggaggatgctgtcattgccatttcaagatta
gcgaatgcttttaaactacacgaccagctgaatgtccaagcacagaacctagtggcagga
gtgactagaaagctatgctttgcgctgagcatcctgggaaattcacctgtcctgattctg
gatgaaccatctacaggcttagatgtgtccgggaaacaacaagtgtggcagacaatccag
gcagctgttagagacaatgagaagggtgtcctcttgtctacacatgacttggctgaggca
gaggctctgtgtgaccgagcggccatcatggtgtctggaaggctgagatgcatcggttca
atccaacatctgaagaggaaatttggcaaggattacgttctggaactcagagtgaaggaa
atttctcaagagccattagttcacagggagattctaaagctgtttcctcaggctgcacgc
caggacaggtgtttctccttgctgacctacaagatacccgtaacagatgttcaccctctg
tctcaggcctttcacaaactagaagcagtgaagcatggctttaacctggaagactacagc
ctctctcagtgcacactggacagagtatttttagagctttcaaaggagcaggagctggga
gatgttcaggaagaagctgatacaaccatgaggaggaggctcctccctccctcagatgaa
ctgtaa
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integrated database retrieval system
