Arvicanthis niloticus (African grass rat): 117711603
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Entry
117711603 CDS
T08817
Symbol
Rai1
Name
(RefSeq) retinoic acid-induced protein 1
KO
K19749
retinoic acid-induced protein 1
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
anu03000
]
117711603 (Rai1)
Transcription factors [BR:
anu03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
117711603 (Rai1)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-HC5HC2H
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
117711603
NCBI-ProteinID:
XP_034363272
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All DBs
Position
6:complement(61246369..61280387)
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AA seq
1888 aa
AA seq
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MQSFRERCGFHGKQQNYPQTSQETSRLENYRQPGQAGLSCDRQRLLAKDYYSPQPYTGYE
GGTGTPSGTVATAAADKYHRGSKSLQGRPAFPSYVQDSSPYPGRYSGEEGLQAWGGPQPP
PPQPQPLPGPVSKYEENLMKKTVVPPNRQYPEQGPQLPFRTHSLHVPPPQPQQPLAYPKL
QRQKPQNDLASPLPFPQGSHFPQHSQSFPTSSTYAPTVQGGGQGAHSYKSCTAPSAQPHD
RPMSANASLAPGQRVQNLHAYQPGRLGYEQQQQALQGRHHTQETLHYQNLAKYQHYGQQG
QGYCPPDTAVRTPEQYYQTFSPSSSHSPARSVGRSPSYSSTPSPLMPNLENFPYSQQPLS
TGAFPTGITDHSHFMPLLNPSPTDAAGSVEPQVSNCKPLPKEKLPDSLLSDLSLQSLTAL
TSQVENISNTVQQLLLSKAAMPQKKGVKNLVSRTPEQHKSQHCSPEGSGYSAEPAGTPLS
EPPSSTPQSTHAEPQDADYLSGSEDPLERSFLYCSQARGSPARVNSNSKAKPESVSTCSV
TSPDDMSTKSDDSFQSLHSTLPLDSFSKFVAGERDCPRLLLSALAQEDLASEILGLQEAI
VEKADKAWAEASSLPKDSGKPPFSLENHSTCLDTVAKTSWSQPGEPETLPEPLQLDKGGS
TKDFSPGLFEDPSVAFATTDPKKTTSPLSFGTKPLLGTATPDPTAAAFDCFPDTTTASSV
DGANPFAWPEENLGDACPRWGLHPGELTKGLEQGAKASDSVGKADAHETSTCMGFQEEHA
IGKPAAALSGEFKQQEADGVKEEVGGLLQCPEVGKADQWLEDSRHCCPSTDFGDLPLLPP
SGRKEDLEAEEEYSSLCELLGSPEQRPSLQDPLSPKAPLICTKEEAEEVLDTKAGWVSPC
HLSGEPAVLLGPSVGAESKVQSWFESSLSHMKPGEEGPEMERAPGSSSTSQGSLAPKPNK
PAVPEGPIAKKEPVPRGKSLRSRRVHRGLPEAEDSPCRVPALPKDLLLPESCTGPPQGQA
EGAGAPGRGLSEGIPRMCTRSLTALSEPQTPGPPGLTTTPTPPDKLGGKQRAAFKSGKRV
GKPSPKAASSPSNPAALPVASDSSPMGSKTKEPDSPSMPGKDQRSMVLRSRTKPQQVFHA
KRRRPSESRIPDCRATKKLPANNHLPTAFKVSSGPQKEGRVSQRVKVPKPGTGSKLSDRP
LHTLKRKSAFMAPVPTKKRSLILRSNNGSGADGREERAESSPGLLRRMASPQRARPRGSG
EPPPPPPLEPPTSCMGLATQSSLPSAVRTKVLPPRKGRGLKLEAIVQKITSPGLKKLACR
VAGAPPGTPRSPALPEKRSGGSPAGAEEGLGGMGAGQMLPAASGADPLCRNPASRSLKGK
LLNSKKLSSAADCPKAEAFMSPETLPSLGTARAPKKRSRKGRTGALGPSKGPLEKRPCPG
QALILAPHDRASSTQGGGEDNSSGGGKKPKTEELGLASQPPEGRPCQPQTRAQKQPGQAS
YSSYSKRKRLSRGRGKATHASPCKGRATRRRQQQVLPLDPAEPEIRLKYISSCKRLRADS
RTPAFSPFVRVEKRDAYTTICTVVNSPGDEPKPHWKPSSSVASSTSSSFDPAGASLTTFP
GGSVLQPRPSLPLTSTMHLGPVVSKALSTSCLVCCLCQNPANFKDLGDLCGPYYPEHCLP
KKKPKLKEKVRLEGTSEEASLPAKRTLKGLECAGSTTSATPTTTTITTTTTLGRLSRPDG
PADPAKQGSLRTSARGLSRRLQSCYCCDGQGDGGEEVAPADKSRKHECSKEAPAEPGGDT
QEHWVHEACAVWTSGVYLVAGKLFGLQEAMKVAVDMPCTSCHEAGATISCSYKGCIHTYH
YPCANDTGCTFIEENFTLKCPKHKRLPL
NT seq
5667 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcttttcgagaaaggtgtggtttccatggcaaacagcaaaactacccacaaacc
tcacaggagacgtcgcgcctggagaactacaggcagccgggtcaggctgggctaagctgt
gatcggcagcggctgctggccaaggactattatagccctcagccctatacagggtatgag
ggtggcactggtacaccttctggcacagtggccacggcagctgcagacaagtaccaccga
ggcagcaaatccctgcaggggaggccagctttccccagctatgttcaagacagcagcccc
tacccagggcgctactctggcgaggagggtcttcaggcctgggggggcccacagccacca
cctcctcagccacagcctctgccagggccagtgagcaagtatgaggagaacttgatgaag
aagacagtggtgcctccaaacaggcagtaccctgagcagggcccccagcttcccttccgg
actcacagcctgcatgtcccaccaccacagcctcagcagcccctggcttaccccaaactc
caaaggcagaaaccacagaatgaccttgcctcccctctgcccttcccccagggcagccac
tttccccagcattcccagtccttccctacctcctctacttatgccccaacagtgcagggt
ggtgggcagggggcccactcatacaagagctgcacagcaccatctgcccagcctcatgac
aggccgatgagtgccaatgcgagcctggctccagggcaacgggtccagaatcttcacgct
taccagccgggccgccttggctacgagcagcagcagcaagcacttcaaggccggcaccac
acccaggaaacactccactaccagaacctcgccaagtaccaacactatggacagcaaggc
cagggctactgtccaccggacacagctgtcaggactccagaacagtattaccagaccttc
agcccgagctccagccactcccctgcacggtctgtcggtcgctccccttcctatagctcc
accccatcaccactgatgcccaatctagagaacttcccctacagccagcagccgcttagt
actggagccttccccacaggcatcacggaccacagccactttatgcccctgctcaaccca
tccccaacagatgctgccggttctgtggagccccaggtcagcaactgcaagcccctgcca
aaagagaagcttcctgacagcctgctgtccgatctcagcctgcagagtctcacggcactc
acctcacaggtggagaacatctccaacactgtgcagcagctcctgctgtccaaagctgcc
atgccacagaagaaaggggtcaagaaccttgtgtctaggactccagagcagcacaaaagc
cagcactgtagccctgagggcagtggctactcagcggagccagcaggcacgccactgtct
gagccgccaagcagcacaccacaatccactcatgctgagccacaagacgctgactacctg
agtggctctgaggacccgctagagcgcagcttcctctactgcagccaggcccggggcagt
cctgccagggtcaatagcaactccaaggccaagcctgagtctgtgtccacctgttctgtc
acctcaccagatgacatgtccaccaagtctgatgactctttccagagcctgcacagtact
ctgccactggacagtttctccaaatttgtggcaggcgagagggactgcccgcggctgctg
ctcagtgccctggcacaggaagatctggcctctgagatcttgggactgcaggaagccatt
gttgagaaggctgacaaggcctgggctgaggcttccagcctgcccaaggacagcggcaag
ccacccttctcactggagaaccacagcacctgcctggacactgtggccaagacttcatgg
tcacagccaggggagccagagaccctacctgagcccttgcagctggacaagggtggcagc
accaaggacttcagcccggggctgtttgaagacccttctgtggcctttgccaccactgac
ccgaagaaaacaactagccccctgtcattcggcaccaagcctttgctcgggactgccact
cctgaccctaccgctgcagcgtttgactgcttcccagatacgaccactgccagctcagtg
gatggtgccaacccttttgcttggccagaggagaacctgggggatgcttgtcctcgttgg
ggcctccatcctggtgagcttaccaagggcttggagcagggtgcaaaagcctcagacagt
gtgggcaaggcagatgcacacgagacctctacctgcatgggtttccaggaagagcatgcc
attgggaagccagcagctgcactgtctggggaattcaagcagcaggaggcagatggggta
aaagaggaagtgggtgggttgctgcagtgccctgaggtgggcaaagctgaccagtggcta
gaggacagtcgccattgctgtccctccactgactttggggacctgccactgttgccgccc
tctggcaggaaggaggacctggaagctgaagaggaatactcttctctgtgtgaactgctg
gggagccctgagcagagacccagcctgcaggacccattgtcccccaaggcgcccctgatc
tgcaccaaggaggaagcagaggaggtgctggataccaaggctggctgggtctctccatgt
cacctctctggggagcctgctgtcctactgggcccttctgtgggtgccgaatcaaaggtc
cagagctggtttgaatcttctctgtcacatatgaagccaggagaagaagggccagagatg
gagagagctccaggtagttctagcacttcacaaggctccttggccccaaagcctaacaag
cctgccgttcccgaggggcccattgctaagaaagagcctgtgccacggggtaaaagttta
cggagcaggcgagtacaccggggcctgcctgaagctgaagactctccatgcagggtgcca
gcactccccaaagacctcttgctcccagagtcctgcacgggtcccccacagggacaggca
gagggggctggagccccaggccgggggctgtcagaagggatccccagaatgtgtacccgc
tctcttacagctctgagtgagccccaaactcctggtcctccaggcctgactaccaccccc
acacctcctgacaaactgggaggtaaacagcgagctgctttcaagtctggcaagcgggta
ggaaaaccatcaccaaaggctgcctccagccccagcaaccctgctgccctgcctgttgcc
tcagacagcagccctatgggctccaaaaccaaggagccagactctcccagcatgcctggc
aaagaccaacgttccatggtcctccggtctcgcaccaaacctcagcaggtcttccatgcc
aaacggcggcggccctcagagagccggatcccagactgtcgtgccaccaagaagctccct
gctaacaaccacttacccactgcattcaaggtctccagtgggccccagaaggaaggtcgc
gtgagccagcgggtcaaagtacccaagcctggtacagggagcaagctttcagacaggcct
cttcacacactcaaaaggaagtcagctttcatggcacctgtccccaccaaaaagcggagc
ctcatcctgcgaagcaacaatggcagtggggcagatgggagggaggagagggctgagagc
tcccctggcctcttaaggaggatggcctcaccccagagggctagacccaggggcagtggg
gagccacccccacctccacccctggagccacccacttcatgcatggggttggctacacaa
tcatccctgcccagtgctgtgaggaccaaggtgctgccaccccgaaagggccgtggcctc
aagctagaggccatagtacagaagatcacctcacctggtctcaagaaacttgcatgcaga
gtggcaggggcccctcctgggacaccccggagcccagccctacctgagaaacgttcaggg
ggcagtccagctggggcagaagagggtttaggaggaatgggtgcagggcaaatgctacca
gcagcttcaggagctgacccattgtgcagaaacccagccagcaggtccctaaaaggtaaa
ctcttgaatagtaagaagctgtcctctgctgctgactgccccaaagctgaggccttcatg
tccccggagactctgccatccctagggactgcccgggcaccgaagaaaaggagccgaaaa
ggcaggactggggctttgggaccctccaaaggcccattggagaagcggccctgtcctggc
caagctctgatcctcgctccccatgacagggccagcagcactcagggtggaggtgaggac
aactccagtggaggaggcaagaagccaaagacagaggagctgggactagcctcccagccc
cctgaaggccggccctgccagccccagacaagggcacagaagcagccaggccaagccagc
tatagcagctattcaaagcggaagcgcctcagccgtggccgggggaaggccactcatgct
tcaccctgtaagggacgtgccactcggagaaggcagcagcaggtcctgcctctggatcct
gcagagcctgaaatccgactcaaatacatttcctcttgcaagaggctaagggcagacagc
cgcaccccagccttctcgccctttgtgcgggtggagaagcgagatgcatacaccaccata
tgcactgttgtcaactccccgggggatgagccgaagcctcactggaagccatcctcctct
gttgcctcctccacctcctcttccttcgacccagctggggcttctctgaccacattccct
ggaggctctgtgctgcagccaaggccctccctacccctcacctccaccatgcatctgggg
cctgtggtgtccaaggccctaagtacctcttgccttgtctgctgcctctgccaaaacccg
gccaatttcaaggaccttggggacctctgtggcccctactaccctgaacactgcctccca
aaaaagaagccaaaactgaaggagaaggtgcggctggagggcacctcagaggaggcctct
ctgcctgccaagaggacactcaaaggcctggaatgtgcaggcagcaccacgtctgccacc
cctaccacaaccaccatcactaccaccacgacactggggaggctgtccaggcctgatggc
ccagctgaccctgccaagcagggctccctgcgtaccagtgcccggggcctgtcacggcgg
ctgcagagttgctattgctgtgatggtcagggggacgggggtgaggaggtggccccagct
gacaagagccgcaaacatgaatgcagcaaagaggcccctgcagaacctggtggggacacc
caggaacactgggtacatgaggcctgtgccgtgtggaccagcggggtgtacctggtggcc
gggaagctctttgggctgcaggaggccatgaaggtagctgtggacatgccatgtaccagc
tgtcatgaagccggagcgaccatctcatgctcctataaaggatgcatccacacctaccac
tacccatgtgccaatgacacaggttgcacattcattgaggagaattttactttgaagtgc
cccaaacataagaggctgccgttgtaa
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