Arvicanthis niloticus (African grass rat): 117711604
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Entry
117711604 CDS
T08817
Symbol
Srebf1
Name
(RefSeq) sterol regulatory element-binding protein 1 isoform X1
KO
K07197
sterol regulatory element-binding transcription factor 1
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04152
AMPK signaling pathway
anu04910
Insulin signaling pathway
anu04931
Insulin resistance
anu04932
Non-alcoholic fatty liver disease
anu04936
Alcoholic liver disease
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04152 AMPK signaling pathway
117711604 (Srebf1)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
117711604 (Srebf1)
09160 Human Diseases
09167 Endocrine and metabolic disease
04936 Alcoholic liver disease
117711604 (Srebf1)
04932 Non-alcoholic fatty liver disease
117711604 (Srebf1)
04931 Insulin resistance
117711604 (Srebf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
anu03000
]
117711604 (Srebf1)
04131 Membrane trafficking [BR:
anu04131
]
117711604 (Srebf1)
Transcription factors [BR:
anu03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
117711604 (Srebf1)
Membrane trafficking [BR:
anu04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
117711604 (Srebf1)
Autophagy
Mitophagy
Other mitophagy associated proteins
117711604 (Srebf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HLH
Motif
Other DBs
NCBI-GeneID:
117711604
NCBI-ProteinID:
XP_034363273
EnsemblRapid:
ENSANLG00005011165
LinkDB
All DBs
Position
6:61224910..61246471
Genome browser
AA seq
1133 aa
AA seq
DB search
MDELPCIEAALEQELAELCELETEVFTDIEDMLQLINNQDSDFPGLFDTPYAGGETGDTG
PSSPSASSPDSFSSPASLGSSLEAFLGGPKVTPAPLSPPPSAPAALKMYPPVPPFSPGPG
IKEEPVPLTILQPPAPQPSPGTLLPPSFPSAPVQLSPAPVLGYSSLPAGFSGTLPGNTQQ
PPSSLPLAPAPGVSPTPLHTQVQSLASQQPLPTSGTPRTSTVASQIQQVPVVLQPHFIKA
DSLLLTAVKTDAGATVKTAGISTLAPGTAVQAGPLQTLVSGGTILATVPLVVDTDKLPIH
RLAAGSKALGSAQSRGEKRTAHNAIEKRYRSSINDKIVELKDLVVGTEAKLNKSAVLRKA
IDYIRFLQHSNQKLKQENLTLRSAHKSKSLKDLVSACGSAGGTDMSVEGMKPEVVETLTP
PPSDAGSPSQSSPLSFGSRGSSSGGSDSEPDSPAFEDSQVKAQRLPSHSRGMLDRSRLAL
CALVFLCLTCNPLASLFGWSIRTPSDATGTHRSSGRNVLEAEGRDGSNWTQWLLPPLVWL
ANGLLVLACLALLFVYGEPVTRPHSGPAVHFWRHRKQADLDLARGDFAQAAQQLWLALQA
LGRPLPTSNLDLACSLLWNLIRHLLQRLWVGRWLAGQAGGLQRDCGLRRDARTSARDAAV
VYHKLHQLHAVGKYTGGHLAASNLALSALNLAECAGDAISMATLAEIYVAAALRVKTSLP
RALHFLTRFFLSSARQACLAQSGSVPLAMQWLCHPVGHRFFVDGDWAVHGAPQESLYSVA
GNPVDPLAQVTRLFCEHLLERALNCIAQPSPGAADGDREFSDALGYLQLLNRCSDAVGTP
ACSFSVSSSMASTTGKDPVAKWWAALTAVVIHWLRRDEEAAERLYPLVEHIPQVLQETER
PLPRAALYSFKAARALLDHRKVESSPASLAICEKASGYLRDSLASTPTGSSIDKAMQLLL
CDLLLVARTSLWQRQQSPASAQVAHGTSNGPQASALELRGFQHDLSSLRRLAQSFRPAMR
RVFLHEATARLMAGASPARTHQLLDRSLRRRAGSSGKGTAAELEPRPTWREHTEALLLAS
CYLPPAFLSAPGQRVSMLAEAARTVEKLGDHRLLLDCQQMLLRLGGGTTVTSS
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atggacgaactgccctgcattgaggcggctctggagcaggaactggccgagctgtgtgaa
ctggagacggaggtttttaccgacatcgaagacatgcttcagctcatcaacaaccaagac
agtgacttccctggcctatttgacaccccctatgctgggggcgagacaggagacacaggc
cccagcagccccagcgccagctctcctgacagcttctcttctcctgcttctctgggatcc
tctttggaagccttcctgggaggacccaaggtgacacctgcgcccctgtcccctccacca
tcggcccctgctgcgttaaagatgtacccacctgtgccccccttctcccctgggcctgga
atcaaagaggagcccgtgccactcaccatcctgcagcccccagcgccacagccatcaccg
ggcaccctcctgcccccaagcttcccttcagcaccagtgcagctcagccctgctccagtg
ctggggtactcgagcctgccggcaggcttctcagggacccttcctggaaacacccaacag
ccaccatctagcctgccactggcccctgcgccaggagtctcgcccacccccttacacacc
caggtccagagcttggcttcccagcagccgctgccaacctcaggaactcctagaacaagc
actgtggcctcacagatccagcaggtcccagttgtactgcagccacacttcatcaaggca
gactcactgctgctgacagctgtaaagacagatgcaggagccacagtgaagactgcaggc
attagcaccctggctcccggcaccgccgtgcaggcgggccccttgcagaccctggtgagt
ggagggaccatcctggccacagtaccattggttgtggacacagacaagctgcccatccac
cgactagcagctggcagcaaggccctaggctcagctcagagccgtggagagaagcgcaca
gcccacaatgccattgagaagcgctaccgttcctctatcaatgacaagattgtggagctc
aaggacctggtggtgggcactgaggcaaagctgaataaatctgctgtcttgcgtaaggcc
atcgactacatccgcttcttacagcacagcaaccagaaactcaaacaggagaacctgacc
ctgcgaagcgctcacaagagcaaatcactgaaggacctggtgtcggcgtgtggcagtgca
ggaggcacagatatgtctgtggagggcatgaaacctgaagtggtggagacgctgacccct
ccgccctcagacgccggctccccgtcccagagtagccccttgtcctttggcagcagaggc
agcagcagtggcggtagtgactctgagcctgacagcccagcctttgaggatagccaggtg
aaagcccagcggctgccttcacatagccgaggcatgctggaccgctcccgcctggccctg
tgtgcactggtcttcctgtgtctgacctgcaaccctttggcctcactgtttggctggagc
atccgcactccctccgatgctacgggcacacaccgtagctccgggcgcaacgtgctggag
gcagagggcagggatggctctaattggacccagtggttgctgccacccctagtctggttg
gccaatggactactagtgttggcctgcttggctcttctctttgtctacggggaacctgtg
accaggccacactctggcccagctgtacacttctggagacatcgcaaacaagctgacctg
gatttggcccggggagattttgcccaggctgctcaacagctgtggctggccctgcaagca
ctgggccggcccctacccacctcaaacctggatctggcctgcagcctgctttggaacctc
atccgccacctgctacagcgtctctgggtgggccgctggctggcaggccaggctgggggc
ctgcagagggactgtgggctgaggagggatgctcgcaccagtgcccgagacgcggctgtt
gtctaccataaactgcaccagctgcacgccgtgggcaagtacacaggaggacatcttgct
gcttctaacctggcactaagtgctctcaacctggctgagtgtgcaggagatgctatatcc
atggcaacactggcagagatctatgtggcagctgccctgagggtcaaaaccagcctccca
agagccttgcacttcttgacacgtttcttcctgagtagtgcccgccaggcctgcctagca
cagagcggctcagtgcctcttgccatgcagtggctctgccaccctgtaggtcaccgtttc
ttcgtggatggggactgggctgtgcatggtgccccccaggagagtctgtacagcgtggct
gggaacccagtggatccactggctcaggtgacccgactattctgtgaacatctcctggag
cgagcattgaactgtatcgctcagcccagcccaggggcagctgatggagacagggagttc
tcagacgcccttggatatctgcagttgctaaatcgctgttctgatgctgttgggactcct
gcgtgcagcttctccgtcagctccagcatggctagcaccactggcaaagacccagtggcc
aagtggtgggccgcactgacagctgtggtgatccactggctgaggcgagatgaagaggca
gctgagcgcttatacccactggtagaacacatcccccaagtactgcaggagactgagaga
cccctgcccagggcagctctatactccttcaaggctgcccgggctctgctggaccacaga
aaggtggaatccagcccagccagcctggccatctgtgagaaggccagtgggtacctgcgg
gacagcttagcctccacaccgactggcagttccatcgacaaggccatgcagctgctcctg
tgtgatctacttcttgtggcccgcaccagtctgtggcagcgccagcagtcaccagcttca
gcccaggtagctcatggtactagcaatggaccccaggcctctgctctggagctgcgaggt
ttccaacacgacctgagcagcctgaggcgcttggcgcagagcttccggccggctatgagg
agggtattcctacatgaggccacagctcggctgatggcaggagcaagtcctgcccggaca
catcagctcctggaccgcagtctgcggaggcgggcaggttccagtggcaaaggcactgca
gctgagctggagcctcgacccacatggcgggagcacacagaggccttgctgttggcctcc
tgctatctgccgcctgccttcctgtcggcccctgggcagcgagtgagcatgctggctgag
gcagcacgcactgtagagaagcttggcgatcaccggctactgcttgactgtcagcagatg
ctcctgcgcctgggtggcgggaccactgtcacttccagctag
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