Arvicanthis niloticus (African grass rat): 117711606
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Entry
117711606 CDS
T08817
Name
(RefSeq) ATP-binding cassette sub-family A member 9 isoform X1
KO
K05651
ATP-binding cassette, subfamily A (ABC1), member 9
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
117711606
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
anu02000
]
117711606
Transporters [BR:
anu02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
117711606
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
ACT_13
R1_ABCA1
RsgA_GTPase
AAA_29
AAA_22
SMC_N
MMR_HSR1
cobW
Motif
Other DBs
NCBI-GeneID:
117711606
NCBI-ProteinID:
XP_034363275
LinkDB
All DBs
Position
6:12253145..12315547
Genome browser
AA seq
1654 aa
AA seq
DB search
MAKAFCINSTYHRTGKWTFTSTSLMSFKKNKQVKMRKRRLRLGQQTWALLCKNWLRKFRM
RRETLLEWLFSFLLILFVYQLSSNLHQIHDAPVMNLGRVDNFNDSNYIIVFAPESETTHE
IMNKVASAPFMKGRTIVACPDEKSMNELDLNYSIDAVRVIFKDTFSYHLKFSWGQRIPKT
KEHKDHSAPCELLNNKMICENSVFWEKGFVAFQAAINAGIIEMTTNHSVMEELMSVIGSN
MKMPPFIAQGGVATDFLIFFCVISFSSLIYYLSVNITQERQYITTLMVMMGLRESAFWLS
WGLMYAGFILVVATLMSLIVKSAQVVVLTGFMVVFLLFFLYGLSLITLSFLMSVLLKKPF
LTGLAVFLLTVFWGSLGFTALYKHLPAFMEWTLCFLSPFAFTTGMAQLIHLDYDVNSNVN
LNSPSNSYLVVATLFMLVLDVLLYLALALYFDKITLSKYGHQRSPLFFLKSSYWFQHRGA
NHVVLENEIDSDPSLNDSLEPVSPEFQGKEAIRIKNLKKEYPGKHGKVEALRGLGFDIYE
GQITALLGHSGAGKTTLINTLSGLSPPTTGSVTIYNQTVSEMEDSDAVIKLTGVCPQSNV
QFGFLTVRENLRLFAKIKGILPHEVEQEVQQVLRDLEMENIQDILAQNLSGGQKRKLTFG
IAILGDPQVLLLDEPTAGLDPLSRHRIWNLLKERRLDRVIVFSTQFMDEADILADRKVFI
SNGRLRCAGSSLFLKKKWGIGYHLSLHLNETCDPESITSLVRKHIPDAKLTAQNEERLVY
ILPLERTNKFPDLYWDLDRCSNQGIEDYGVSMTTLNEVFLKLEGKTMADESDVGICGRLQ
SDGAKDVESLVELERVLSLDLSGSSVSGMALWRQQLCAIAKVRFLKLKNERKSLMTVLLL
FGLSFIPQLLEHLVYKVDHKDYSWGLSPSMYFLSPGQPPQDPLTHLLVINKTGLSIDNFV
HSLRQQGIALDMDALGTRNGTEEALYNGAITVLGDEKGLRFSVACNARRLNCFPVLMDII
SNGLLGIFNSSERIRTDRSTVFEEHMLYEYGFMSNAFFWIPVAASLTPYIAMGSISDHKK
KVLSQLWTSGLSPSAYWCGQALLDIPIYFLILLLMQIMDSVFSSEEIMSVIESLLIQIPC
SIGYASSLIFLTYVISFIFRNGRKNSGLWSFFFLIVTIFFIIATDINEYGFLELLFCTLL
VPPFTLIGSLLIFSEVSYDSVDYLGASQSQLVFLALLIPYLHFLLFFFVLRCLERYLRKK
SLRVDPVFRISPRSCRAFPNPEEPGEEDEDVQMERVRTTGAMATLQTDEKPVIIASCLRK
EYTGKTKWCFSKTKKKIAIRNISFCVKKGEVLGLLGHNGAGKSTTISMITGDTIPTAGQV
FLKGSVGGAALGFLGYCPQENVLWPILTVKEHLELYAAVKGLKKKDAVVTITRLVNALKL
QDHLKALVKTLPEGVKRKLCFLLSILGNPSVVLLDEPSTGMDPEGQQQMWQAIRATFTNT
ERGALLTTHYMAEAEAVCDRVAIMVSGRLRCIGSIQHLKSRFGKDYLLEMKVKSPAQVES
LNTEIMRLFPQAARQERYSSLMVYKLPVEEVRPLSEAFFKLERLKENFDLEEYSLSQSTL
EQVFLELSKEQELDDFDEEANSSVKWKLLPQEEA
NT seq
4965 nt
NT seq
+upstream
nt +downstream
nt
atggctaaagcattttgcataaacagcacatatcacagaacaggcaagtggactttcaca
tctacttccttgatgtcctttaaaaaaaataaacaagtcaaaatgaggaagagacgcttg
agactgggtcagcaaacgtgggctcttctctgcaagaactggctcagaaagttcagaatg
agaagagagaccttgctggaatggcttttctcatttctcttaatattgtttgtatatcaa
ttatcctccaatttgcatcaaatacatgacgctcctgtgatgaacctgggacgtgttgat
aactttaatgattctaattatattattgtgtttgctcctgagtctgaaaccacccatgag
ataatgaacaaagtggcctcagctccattcatgaaaggaagaacgatcgtggcgtgtcct
gatgaaaaatccatgaacgaactagatttaaattattcaatagatgcagtgagagtcatc
ttcaaggatactttctcatatcatttgaaattttcttggggtcagcggatccctaaaacg
aaagaacacaaagaccattcagctccttgtgaactacttaacaacaaaatgatttgtgaa
aattcagtcttctgggaaaaaggctttgtagcctttcaagctgccatcaacgccgggatc
atagagatgacaacaaaccactctgtgatggaagagctgatgtcagttattggttcaaat
atgaagatgcctccttttatcgcccaaggaggcgttgcaactgattttttaattttcttc
tgtgttatttcattttcttcacttatatactatttatcggtcaacattacccaagaaaga
cagtacatcacaacactaatggtgatgatgggacttcgagagtcggctttctggctttcc
tggggtctgatgtatgctggctttatccttgtcgtggctactttgatgtctcttattgtg
aaatctgcccaagttgtcgtcttaactggtttcatggtggtgttccttctgtttttcctt
tatggcctgtctttgataactttatctttcctcatgagtgtgttgttaaagaaaccattt
cttactggcttggctgtcttcctccttaccgtcttctggggaagtctgggattcacagca
ttatacaaacatcttcccgcctttatggaatggactttgtgttttcttagcccctttgcc
tttaccactggaatggcccagcttatacacttggactacgatgtgaattctaatgtaaat
ttgaactctccaagcaactcgtacctggttgtggccaccctcttcatgttggttttggat
gttcttctctatttggcactagcattgtattttgacaaaattacactcagtaagtacgga
catcaaaggtctccactgtttttcctgaagtcgtcttactggtttcaacacagaggagct
aaccatgtggtccttgagaatgaaatagactctgacccttcactgaatgactcgttggaa
ccagtgtctccagaattccaggggaaagaagccatcaggatcaaaaatcttaaaaaagaa
tacccaggaaagcatggaaaagtcgaagccttaagaggtctgggatttgacatatatgaa
ggccagatcactgccctccttggtcatagtggagctgggaagaccaccctgataaataca
ctcagtggcctgtcaccccctactacaggttctgtcaccatttataaccagacagtttca
gagatggaggactctgatgctgtcatcaagctcacgggagtttgtccacaatccaatgta
cagtttgggtttctcaccgttcgagaaaacctcaggctttttgccaagataaagggaatt
ctgccacacgaagtggagcaagaggtacaacaagttttacgggacttagaaatggaaaat
attcaagacattcttgctcagaatttaagtggaggacaaaaaaggaagctgacttttggg
atcgccattttaggagacccccaggttttgctactggatgaaccaaccgctgggttggat
ccactctcgaggcatcgcatatggaacctactgaaagagaggagactagacagagtaatt
gtcttcagtactcagttcatggatgaggctgatatcctggctgacaggaaggtgtttata
tccaatgggagactgaggtgtgcaggctcttctctgttcctgaagaagaaatggggtatt
ggctatcacctaagtttgcatttgaatgaaacatgtgatccagagagtataacgtcattg
gtcagaaaacacatccctgatgccaagctgaccgcacaaaacgaagaacggcttgtctat
atcttgcccctggaaaggacaaacaagtttccagatctttactgggatcttgatagatgt
tctaaccaaggcattgaggattatggcgtttccatgacaaccctgaatgaggtgttcctg
aagttagaagggaagacaatggctgatgaatcggatgttggcatttgtgggcgcttacaa
agcgatggggcaaaagacgtggaaagccttgtagagctggagcgagtgttgtctctagat
ctgtcaggaagctcagtcagtggcatggcgctgtggaggcagcagctctgcgccattgcg
aaggttcgcttcctcaagctcaagaatgaacgaaaaagtctgatgaccgtgttattgctt
tttggccttagctttatccctcaacttttggagcatctagtctacaaggtagaccacaaa
gattactcatgggggctatctccgagtatgtatttcctttcaccaggacagccaccacag
gatcctctgacccacttactggtcatcaataaaacaggtttaagcattgataactttgta
cattcactaagacagcagggcatagcattagacatggatgccctggggaccagaaatggc
acagaagaggcgctgtacaatggtgctatcacggtgctgggtgatgaaaagggtctcaga
ttttccgtcgcgtgtaacgccagaagactaaactgctttccagtcctcatggatattatt
agcaatgggctgcttggaatctttaactcttcagaacgcattcggactgacagaagcaca
gtcttcgaagagcacatgctttatgagtatggattcatgagcaacgcatttttctggata
ccggtggctgccagcctcacgccttacattgcgatgggcagcatcagtgaccacaaaaaa
aaagttctttcccagctgtggacttcaggcctttccccatctgcttactggtgtggtcag
gctctgctggacatccccatatacttcctcatcctccttctcatgcaaataatggacagt
gttttcagttcagaagagattatgtctgtgattgagagcctgttgattcaaatcccatgt
agtattggatatgcatcatctctcatattcttgacttatgtgatttcattcatttttcgt
aatggcagaaaaaacagtggcctctggtcatttttcttcctaattgtcaccatcttcttc
atcattgctaccgacataaatgagtatggctttctagagctactgttctgtaccctttta
gtaccccccttcacactgattggctcgctattgattttttctgaggtttcttatgactct
gtggattacttaggagcgtcacaatctcaacttgtatttctggcattgttgataccttac
cttcattttcttcttttctttttcgttcttcgatgtctggagagatacctcaggaagaag
tcactgagagtggaccctgtgttcagaatttctccgagaagctgtcgtgcttttccaaac
ccagaagagcctggagaagaggatgaagatgttcagatggaaagagtgagaacaacaggt
gccatggctaccctacagacggatgagaaaccagtcatcattgcaagctgtctgcggaag
gaatatacaggcaaaacgaaatggtgcttttccaaaacgaagaaaaagattgccataagg
aacatctccttctgtgttaaaaaaggtgaagttctagggctcttaggacacaatggagct
ggcaaaagtacgacgattagtatgataacaggagacacaataccaaccgcagggcaggta
tttttgaaagggagtgttgggggtgctgccctggggttcttggggtactgtcctcaggag
aacgtgctgtggcccatcctgacggtgaaggaacatctggagttatatgctgctgtgaaa
ggactgaagaaaaaggatgctgtggtcaccatcacacggttggtgaatgccctcaaactg
caggatcatttgaaggctctcgtcaagaccctgccagagggagtgaagagaaagctttgt
ttcctgctgagcatcctgggaaacccttctgtggtgcttctggatgagccatcaactggg
atggatcctgaagggcagcagcaaatgtggcaggcgatccgggcaacttttacaaacaca
gagcggggcgccctcctgaccacccattacatggcagaggcagaggctgtatgtgaccgt
gtggccatcatggtgtctgggagactgaggtgtattggttctatccaacatctaaagagc
agatttggcaaagattacctgctggagatgaaggtgaagagcccggcacaggtggagtcc
ctgaacacggagatcatgaggctcttcccccaggctgctcggcaggaaaggtactcctct
ctgatggtctataagttgcctgttgaggaggtacgacctttatctgaggctttcttcaaa
ctggagagattgaaagagaactttgacctggaggagtacagcctctcacagtccactctg
gagcaggtctttctggagctctccaaggagcaggagctggacgattttgatgaggaagca
aattcctcagtgaagtggaagctcctcccacaggaagaagcttaa
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