Arvicanthis niloticus (African grass rat): 117711606
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Entry
117711606 CDS
T08817
Symbol
Abca9
Name
(RefSeq) ATP-binding cassette sub-family A member 9
KO
K05651
ATP-binding cassette, subfamily A (ABC1), member 9
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
117711606 (Abca9)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
anu02000
]
117711606 (Abca9)
Transporters [BR:
anu02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
117711606 (Abca9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
RsgA_GTPase
AAA_29
SMC_N
MMR_HSR1
AAA_22
cobW
AAA_23
Motif
Other DBs
NCBI-GeneID:
117711606
NCBI-ProteinID:
XP_034363275
LinkDB
All DBs
Position
6:12257890..12314134
Genome browser
AA seq
1561 aa
AA seq
DB search
MNLGRVDNFNDSNYIIVFAPESETTHEIMNKVASAPFMKGRTIVACPDEKSMNELDLNYS
IDAVRVIFKDTFSYHLKFSWGQRIPKTKEHKDHSAPCELLNNKMICENSVFWEKGFVAFQ
AAINAGIIEMTTNHSVMEELMSVIGSNMKMPPFIAQGGVATDFLIFFCVISFSSLIYYLS
VNITQERQYITTLMVMMGLRESAFWLSWGLMYAGFILVVATLMSLIVKSAQVVVLTGFMV
VFLLFFLYGLSLITLSFLMSVLLKKPFLTGLAVFLLTVFWGSLGFTALYKHLPAFMEWTL
CFLSPFAFTTGMAQLIHLDYDVNSNVNLNSPSNSYLVVATLFMLVLDVLLYLALALYFDK
ITLSKYGHQRSPLFFLKSSYWFQHRGANHVVLENEIDSDPSLNDSLEPVSPEFQGKEAIR
IKNLKKEYPGKHGKVEALRGLGFDIYEGQITALLGHSGAGKTTLINTLSGLSPPTTGSVT
IYNQTVSEMEDSDAVIKLTGVCPQSNVQFGFLTVRENLRLFAKIKGILPHEVEQEVQQVL
RDLEMENIQDILAQNLSGGQKRKLTFGIAILGDPQVLLLDEPTAGLDPLSRHRIWNLLKE
RRLDRVIVFSTQFMDEADILADRKVFISNGRLRCAGSSLFLKKKWGIGYHLSLHLNETCD
PESITSLVRKHIPDAKLTAQNEERLVYILPLERTNKFPDLYWDLDRCSNQGIEDYGVSMT
TLNEVFLKLEGKTMADESDVGICGRLQSDGAKDVESLVELERVLSLDLSGSSVSGMALWR
QQLCAIAKVRFLKLKNERKSLMTVLLLFGLSFIPQLLEHLVYKVDHKDYSWGLSPSMYFL
SPGQPPQDPLTHLLVINKTGLSIDNFVHSLRQQGIALDMDALGTRNGTEEALYNGAITVL
GDEKGLRFSVACNARRLNCFPVLMDIISNGLLGIFNSSERIRTDRSTVFEEHMLYEYGFM
SNAFFWIPVAASLTPYIAMGSISDHKKKVLSQLWTSGLSPSAYWCGQALLDIPIYFLILL
LMQIMDSVFSSEEIMSVIESLLIQIPCSIGYASSLIFLTYVISFIFRNGRKNSGLWSFFF
LIVTIFFIIATDINEYGFLELLFCTLLVPPFTLIGSLLIFSEVSYDSVDYLGASQSQLVF
LALLIPYLHFLLFFFVLRCLERYLRKKSLRVDPVFRISPRSCRAFPNPEEPGEEDEDVQM
ERVRTTGAMATLQTDEKPVIIASCLRKEYTGKTKWCFSKTKKKIAIRNISFCVKKGEVLG
LLGHNGAGKSTTISMITGDTIPTAGQVFLKGSVGGAALGFLGYCPQENVLWPILTVKEHL
ELYAAVKGLKKKDAVVTITRLVNALKLQDHLKALVKTLPEGVKRKLCFLLSILGNPSVVL
LDEPSTGMDPEGQQQMWQAIRATFTNTERGALLTTHYMAEAEAVCDRVAIMVSGRLRCIG
SIQHLKSRFGKDYLLEMKVKSPAQVESLNTEIMRLFPQAARQERYSSLMVYKLPVEEVRP
LSEAFFKLERLKENFDLEEYSLSQSTLEQVFLELSKEQELDDFDEEANSSVKWKLLPQEE
A
NT seq
4686 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgggacgtgttgataactttaatgattctaattatattattgtgtttgctcct
gagtctgaaaccacccatgagataatgaacaaagtggcctcagctccattcatgaaagga
agaacgatcgtggcgtgtcctgatgaaaaatccatgaacgaactagatttaaattattca
atagatgcagtgagagtcatcttcaaggatactttctcatatcatttgaaattttcttgg
ggtcagcggatccctaaaacgaaagaacacaaagaccattcagctccttgtgaactactt
aacaacaaaatgatttgtgaaaattcagtcttctgggaaaaaggctttgtagcctttcaa
gctgccatcaacgccgggatcatagagatgacaacaaaccactctgtgatggaagagctg
atgtcagttattggttcaaatatgaagatgcctccttttatcgcccaaggaggcgttgca
actgattttttaattttcttctgtgttatttcattttcttcacttatatactatttatcg
gtcaacattacccaagaaagacagtacatcacaacactaatggtgatgatgggacttcga
gagtcggctttctggctttcctggggtctgatgtatgctggctttatccttgtcgtggct
actttgatgtctcttattgtgaaatctgcccaagttgtcgtcttaactggtttcatggtg
gtgttccttctgtttttcctttatggcctgtctttgataactttatctttcctcatgagt
gtgttgttaaagaaaccatttcttactggcttggctgtcttcctccttaccgtcttctgg
ggaagtctgggattcacagcattatacaaacatcttcccgcctttatggaatggactttg
tgttttcttagcccctttgcctttaccactggaatggcccagcttatacacttggactac
gatgtgaattctaatgtaaatttgaactctccaagcaactcgtacctggttgtggccacc
ctcttcatgttggttttggatgttcttctctatttggcactagcattgtattttgacaaa
attacactcagtaagtacggacatcaaaggtctccactgtttttcctgaagtcgtcttac
tggtttcaacacagaggagctaaccatgtggtccttgagaatgaaatagactctgaccct
tcactgaatgactcgttggaaccagtgtctccagaattccaggggaaagaagccatcagg
atcaaaaatcttaaaaaagaatacccaggaaagcatggaaaagtcgaagccttaagaggt
ctgggatttgacatatatgaaggccagatcactgccctccttggtcatagtggagctggg
aagaccaccctgataaatacactcagtggcctgtcaccccctactacaggttctgtcacc
atttataaccagacagtttcagagatggaggactctgatgctgtcatcaagctcacggga
gtttgtccacaatccaatgtacagtttgggtttctcaccgttcgagaaaacctcaggctt
tttgccaagataaagggaattctgccacacgaagtggagcaagaggtacaacaagtttta
cgggacttagaaatggaaaatattcaagacattcttgctcagaatttaagtggaggacaa
aaaaggaagctgacttttgggatcgccattttaggagacccccaggttttgctactggat
gaaccaaccgctgggttggatccactctcgaggcatcgcatatggaacctactgaaagag
aggagactagacagagtaattgtcttcagtactcagttcatggatgaggctgatatcctg
gctgacaggaaggtgtttatatccaatgggagactgaggtgtgcaggctcttctctgttc
ctgaagaagaaatggggtattggctatcacctaagtttgcatttgaatgaaacatgtgat
ccagagagtataacgtcattggtcagaaaacacatccctgatgccaagctgaccgcacaa
aacgaagaacggcttgtctatatcttgcccctggaaaggacaaacaagtttccagatctt
tactgggatcttgatagatgttctaaccaaggcattgaggattatggcgtttccatgaca
accctgaatgaggtgttcctgaagttagaagggaagacaatggctgatgaatcggatgtt
ggcatttgtgggcgcttacaaagcgatggggcaaaagacgtggaaagccttgtagagctg
gagcgagtgttgtctctagatctgtcaggaagctcagtcagtggcatggcgctgtggagg
cagcagctctgcgccattgcgaaggttcgcttcctcaagctcaagaatgaacgaaaaagt
ctgatgaccgtgttattgctttttggccttagctttatccctcaacttttggagcatcta
gtctacaaggtagaccacaaagattactcatgggggctatctccgagtatgtatttcctt
tcaccaggacagccaccacaggatcctctgacccacttactggtcatcaataaaacaggt
ttaagcattgataactttgtacattcactaagacagcagggcatagcattagacatggat
gccctggggaccagaaatggcacagaagaggcgctgtacaatggtgctatcacggtgctg
ggtgatgaaaagggtctcagattttccgtcgcgtgtaacgccagaagactaaactgcttt
ccagtcctcatggatattattagcaatgggctgcttggaatctttaactcttcagaacgc
attcggactgacagaagcacagtcttcgaagagcacatgctttatgagtatggattcatg
agcaacgcatttttctggataccggtggctgccagcctcacgccttacattgcgatgggc
agcatcagtgaccacaaaaaaaaagttctttcccagctgtggacttcaggcctttcccca
tctgcttactggtgtggtcaggctctgctggacatccccatatacttcctcatcctcctt
ctcatgcaaataatggacagtgttttcagttcagaagagattatgtctgtgattgagagc
ctgttgattcaaatcccatgtagtattggatatgcatcatctctcatattcttgacttat
gtgatttcattcatttttcgtaatggcagaaaaaacagtggcctctggtcatttttcttc
ctaattgtcaccatcttcttcatcattgctaccgacataaatgagtatggctttctagag
ctactgttctgtacccttttagtaccccccttcacactgattggctcgctattgattttt
tctgaggtttcttatgactctgtggattacttaggagcgtcacaatctcaacttgtattt
ctggcattgttgataccttaccttcattttcttcttttctttttcgttcttcgatgtctg
gagagatacctcaggaagaagtcactgagagtggaccctgtgttcagaatttctccgaga
agctgtcgtgcttttccaaacccagaagagcctggagaagaggatgaagatgttcagatg
gaaagagtgagaacaacaggtgccatggctaccctacagacggatgagaaaccagtcatc
attgcaagctgtctgcggaaggaatatacaggcaaaacgaaatggtgcttttccaaaacg
aagaaaaagattgccataaggaacatctccttctgtgttaaaaaaggtgaagttctaggg
ctcttaggacacaatggagctggcaaaagtacgacgattagtatgataacaggagacaca
ataccaaccgcagggcaggtatttttgaaagggagtgttgggggtgctgccctggggttc
ttggggtactgtcctcaggagaacgtgctgtggcccatcctgacggtgaaggaacatctg
gagttatatgctgctgtgaaaggactgaagaaaaaggatgctgtggtcaccatcacacgg
ttggtgaatgccctcaaactgcaggatcatttgaaggctctcgtcaagaccctgccagag
ggagtgaagagaaagctttgtttcctgctgagcatcctgggaaacccttctgtggtgctt
ctggatgagccatcaactgggatggatcctgaagggcagcagcaaatgtggcaggcgatc
cgggcaacttttacaaacacagagcggggcgccctcctgaccacccattacatggcagag
gcagaggctgtatgtgaccgtgtggccatcatggtgtctgggagactgaggtgtattggt
tctatccaacatctaaagagcagatttggcaaagattacctgctggagatgaaggtgaag
agcccggcacaggtggagtccctgaacacggagatcatgaggctcttcccccaggctgct
cggcaggaaaggtactcctctctgatggtctataagttgcctgttgaggaggtacgacct
ttatctgaggctttcttcaaactggagagattgaaagagaactttgacctggaggagtac
agcctctcacagtccactctggagcaggtctttctggagctctccaaggagcaggagctg
gacgattttgatgaggaagcaaattcctcagtgaagtggaagctcctcccacaggaagaa
gcttaa
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integrated database retrieval system
