Arvicanthis niloticus (African grass rat): 117711639
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Entry
117711639 CDS
T08817
Symbol
Sox30
Name
(RefSeq) transcription factor SOX-30
KO
K09271
transcription factor SOX15/30
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
anu03000
]
117711639 (Sox30)
Transcription factors [BR:
anu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
117711639 (Sox30)
BRITE hierarchy
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
117711639
NCBI-ProteinID:
XP_034363328
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Position
6:complement(74665013..74696286)
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AA seq
773 aa
AA seq
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MERARPEPEPPTPRQPPRPTPPRPLRPAPPAQPVEAATFRAAAAERSQSPSAQAAAAIAA
VASSCGEAAAAGAQAGARRLLQVKPEQVLLLPPGPLLPQAPDEGAAAAAVAASSAQARLL
QLRPELLLLPPQSAADGGSCRPELRPMQPRTLLVKAEKQELGTGLDLSVGSRRTTEAGPR
ASRAAKLDGTGKALDGRRGDEKKAKLEAEEASRDALKGGEGRSLLAIGEGVIKTEEPDRL
RDDCRLGTEATSNGLVHSSKEAILAQPPSAFGPHQQDLRFPLTLHTVPPGARIQFQGPPP
SELIRLSKVPLTPVPIKMQSLLEPSVKIETKDVPLTVLPSDAGIPDTPFSKDRNGHVKRP
MNAFMVWARIHRPALAKANPAANNAEISVQLGLEWNKLSEEQKKPYYDEAQKIKEKHREE
FPGWVYQPRPGKRKRFPLSVSNVFSGTTQNIISTNPTTIYPYRSPTYSVVIPGLQNTITH
PAGEAPPAIQLPTPAVQRPSPITLFQPSVSSTGPVAVPPPSLTPRPSLPPQRFSGPSQTD
VHRLPSGTSRSVKRPTPVSLESTNRIPAGASTAHARFATSPIQPPKEYASVSSCPRSTPI
PPATPIPHSHVYQPPPLGHPATLFGTPPRFSFHHPYFLPGPHYFPSSTCPYSRPPFGYGN
FPSSMPECLGYYEDRYQKHEAIFSALNRDYPFRDYPDEHTHSEDSRGCESMDGPPYYNSH
GHSGEEYLSPMPPLDIGALENVFTAPASAPSGVQQVNVTDSDEEEEEKVLRNL
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atggagagagccaggccggagccggagccgccgacgccgcgccaaccgccgcggcccacc
cctccgcgcccgttgcgccccgctccgcccgcgcagcccgtcgaggccgccaccttccgg
gccgcggccgcagagcgctcccagtcgccgtcggctcaggccgcggccgccatcgccgcg
gtggcctcgtcgtgcggggaggccgcggcggcaggtgcgcaggctggggcgcgacgcctg
ctgcaagtgaagccggaacaggtgctgctgctgcctccgggaccgctgttacctcaggct
ccggacgagggcgccgccgccgccgccgtcgccgcctcgtccgcgcaggcgcgcctgctg
cagctgaggccggagctgctgctgttgccgccgcagtccgcggccgacgggggctcctgc
aggccggagctgcgccccatgcagccccggacgctgctcgtcaaggccgagaagcaggag
ctggggacgggcttggacctgtcggtgggatctcggaggaccaccgaggccggccctaga
gcctcgagggccgccaagttggatggtaccgggaaggccctcgacggccgccgaggagat
gagaagaaagccaagctggaggcagaggaggcctcgagggatgccctgaaaggcggggaa
ggcaggagcctgctggccatcggagaaggagtcatcaagaccgaggagccagacagactc
agggacgactgtaggctgggcacggaggccacgtccaatggcctggtccacagcagcaag
gaggccatcctggcccagcctcccagtgcttttgggccacaccaacaagacctaaggttc
cctttgactctccacaccgtccctcctggagcccgtatccaatttcaggggcctccacct
tctgagttgatacggttgtccaaggtccccctgacaccagtgcctattaaaatgcagtcc
ttgctggagccttctgtaaaaattgaaaccaaagatgtccccctcaccgtgcttccctca
gatgcaggaatacctgacactcccttcagtaaggacagaaatggtcatgtgaagcgaccc
atgaatgcatttatggtttgggcaagaatccaccgaccagcactagccaaagctaaccca
gccgccaacaatgcagaaatcagtgtccagctcgggttagagtggaacaaacttagtgaa
gaacaaaagaaaccttattatgatgaagcacaaaagattaaagagaagcacagagaggaa
tttcctggttgggtttatcagcctcgtccagggaagcgaaaacgcttccctctaagtgtt
tccaatgtgttttctggtaccacacagaatatcatctctacaaatccgacaacaatttat
ccttaccgctcacctacctactctgtggtaattcccggccttcagaacaccatcactcat
ccagctggtgaagccccgcctgccatccagctgcccacacctgcagtccagcgcccaagt
cccatcacattgttccagcccagcgtctccagcactggcccggtggccgtcccacctcca
agcctgacgccccgcccatcactcccacctcagcgcttttctgggccttcccaaactgac
gttcataggctcccttcgggaaccagtcgctctgtgaagagacccactccagtctctttg
gagagcaccaacaggattccagctggtgcaagtactgcccatgccagatttgcaacctcg
cctatccagcctcccaaggagtatgccagcgtttcctcttgtccccgaagcactccaata
cccccagctactcccattccacactcacacgtctatcagcccccgccccttggccatcca
gccacactgtttgggacaccacctcggttctcctttcatcacccttacttcctacctgga
cctcattacttcccgtcaagcacgtgcccttatagtcggcctccctttggctatggaaat
tttccaagttcaatgccagaatgtctcggttattatgaagacaggtaccaaaaacatgag
gctatattttcagctttaaatagagactatcccttcagagactatccagatgagcacaca
cacagtgaagactctcggggctgtgagagcatggatggacccccgtactacaacagccat
ggccacagtggggaagagtacttgagtcccatgcctccactggacattggagccttggag
aatgtcttcacagccccagcgtcagctccctctggtgtccagcaagtcaatgtcactgac
agcgacgaggaggaagaagaaaaagtgctcaggaatttatag
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