Arvicanthis niloticus (African grass rat): 117711641
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Entry
117711641 CDS
T08817
Symbol
Smyd4
Name
(RefSeq) SET and MYND domain-containing protein 4 isoform X1
KO
K24634
SET and MYND domain-containing protein 4 [EC:2.1.1.-]
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
anu04990
]
117711641 (Smyd4)
Domain-containing proteins not elsewhere classified [BR:
anu04990
]
Zinc finger domain-containing proteins
MYND-type zinc finger domain-containing proteins
117711641 (Smyd4)
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Gene cluster
GFIT
Motif
Pfam:
SET
zf-MYND
TPR_12
ANAPC3
TPR_NPHP3
TPR_BSK1_C
Motif
Other DBs
NCBI-GeneID:
117711641
NCBI-ProteinID:
XP_034363330
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Position
6:complement(46399839..46456495)
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AA seq
801 aa
AA seq
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MDLPVDEWKSYLLDKWALLPKSVQVTISTAETLSDIFLHSSSLLQPEDEVFLKQLSSSHL
VDKDYDAPLFYREEGNKKFQEKEYTGAAVLYSKGVSHSRPNTEDMSLCYANRSAALFHLG
QYEACLKDIVRADMHGYPERLRPKMMVRKTECLVNLGRLQEARQTISDLESSLAAKPTPV
LSSYQILQRNVQRLKMKIQEKEALPESFPAALTNAFEAMALGEENKQISGASHSVSLCTD
SLKGRHLVATKDILPGELLVKEDAFVSVLNPGEMPPSYHCLENKWDTRVTSGDLYCHRCL
KHTLATVPCGGCSYAKYCSQECMQQAWEHYHSMECSLGSLLLTLGVFCHVALRMTLLARF
EDVDRVVKILCDKAGSKDTCLPESKNLVKTFDYTNQGESKENSKVGEPPIPGCNVNGKYE
SNYNAVFSLLSHTEKHSPEHKFICAISVSALCRQLKAASLQAQTMGLKFPELKAVTPGLC
ADLTIWGVAMLRHMLQLQCNAQAITSICHTGSNESIVANSRQVRLATGVFPVVSLLNHSC
SPNTSVSFTSTVATIRAAQRIAKGQEILHCYGPHESRMGVTERRQRLSSQYFFDCSCPAC
HAETLKAAAAPKWEAFCCNTCRVLMQGNDVLSCSNESCTESVSRGCLVSRLQGLQQQVHV
AQKLLTNGKPEQAIQQLLRCREAAESFLSAEHTVLGEIEDGLAQAYATLGDWLKSAAHVQ
KSLQVVEARHGPSSIEIGHELFKLAQVLFNGLAVPEALSAIWKAEKILLVHCGPESDEVQ
ELREMRSCLLNPSFIPAGPVV
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atggatctacctgtagatgaatggaaatcctacctacttgacaagtgggctttactcccg
aagtctgtgcaggtcacaatttctacagcagagactttgagtgacatctttcttcattcc
tcttcccttcttcaacctgaggatgaggtgtttttgaagcaactttctagtagtcacctg
gtggacaaggactatgatgctccccttttctacagagaagaaggaaacaaaaaattccaa
gagaaggagtacacaggtgctgcagtgctgtactctaagggagtgtctcattcaaggcct
aacactgaggacatgtcactgtgctatgccaatcgctctgcagccctcttccacctgggc
cagtatgaagcatgtcttaaagacatagtgagagcagatatgcatgggtatcctgaaaga
ctgcggcccaagatgatggtgcgtaagacagaatgcctggtgaacctcgggagactccag
gaagcaagacagactatcagtgatcttgaaagcagcctcgctgccaagccaaccccggtg
ctttcctcttatcagattctgcagaggaatgtccagcgtctgaaaatgaaaatccaagaa
aaggaggctctcccagaatccttccctgccgctctcaccaatgcctttgaggctatggcc
ctgggggaagagaacaaacagatttctggggcatcccactctgtcagcttatgcacagac
tctttgaaaggccgccatctagttgccacaaaagacattctcccaggagaactcctggtg
aaggaagatgcttttgtaagtgtccttaacccaggagaaatgccaccatcgtatcattgc
ctagagaacaagtgggataccagagttaccagtggagacctctactgtcaccgatgtctg
aagcacactttggccacagtaccctgtggtggctgcagctatgccaagtattgcagccaa
gaatgtatgcagcaggcgtgggaacactaccatagcatggagtgttctctagggtcactg
ctcctcacactcggggtcttctgccatgttgccctgaggatgactcttttagccagattt
gaagatgttgacagagttgtaaagatactttgtgacaaggctggtagcaaagacacctgt
ttacctgaaagcaagaatctggtcaagacatttgattacacaaatcagggagagagtaaa
gagaacagcaaagtaggtgaacccccaattcctggatgcaatgtcaatgggaagtatgag
agtaattataatgctgtcttcagtcttttgtcccacactgaaaaacatagcccagaacac
aaattcatctgtgccatcagtgtctccgcactgtgcagacagctcaaagctgccagcttg
caggcccagaccatgggcttaaagttccctgagctgaaagcagtgactccagggctgtgt
gcagatttgactatttggggagtagccatgctgagacacatgctacaactgcagtgtaat
gcccaggcgataacttccatatgtcacacagggtctaacgagagcatcgttgccaacagc
agacaggtacgccttgccacaggcgtcttccctgttgtcagcctcctgaaccactcctgc
agccccaacaccagtgtgtccttcaccagcactgtcgccaccatccgggcagcacagagg
atcgcaaaaggacaagagattctgcactgctacgggcctcatgagagccggatgggtgtt
actgagaggcgccagaggctgagttctcagtacttctttgactgcagctgtccagcctgt
catgctgagacactgaaagcagctgcagcacccaagtgggaagccttctgttgtaacact
tgcagagtgctcatgcagggaaatgatgtgctgagctgtagcaacgaatcttgcacagaa
tctgtcagcagaggctgtctggtctctcgcctgcagggccttcagcaacaggttcacgtg
gcccagaagcttctcacaaatggtaaaccagagcaagctattcaacagttgttgcggtgc
cgggaggctgccgagagcttcttgtcagcagagcacaccgtgctgggagaaattgaagac
ggcctggcccaggcctatgctaccttaggagactggctaaagtctgctgcccatgtacag
aagagtctccaggtggttgaagctcgccatgggccatccagtattgaaattggccatgaa
ctcttcaaactggcccaagtcttgttcaatgggttggcagtgcctgaagctctgagtgcc
atatggaaggcagaaaagatcctgttggtgcattgtggccccgagagtgacgaggtccag
gagctccgggagatgaggtcctgcttactgaacccatcattcatccctgcggggcccgtg
gtgtag
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