Arvicanthis niloticus (African grass rat): 117711682
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Entry
117711682 CDS
T08817
Symbol
Tob1
Name
(RefSeq) protein Tob1
KO
K14443
protein Tob/BTG
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117711682 (Tob1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
anu03019
]
117711682 (Tob1)
Messenger RNA biogenesis [BR:
anu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117711682 (Tob1)
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
117711682 (Tob1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTG
PAM2
TFIIA
CCDC53
YjbH
VPS13_N
CDC27
TERB2
CobT
Motif
Other DBs
NCBI-GeneID:
117711682
NCBI-ProteinID:
XP_034363386
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All DBs
Position
6:complement(28201773..28205191)
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AA seq
366 aa
AA seq
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MQLEIQVALNFIISYLYNKLPRRRVNIFGEELERLLKKKYEGHWYPEKPYRGSGFRCIHV
GEKVDPVIEQASKESGLDIDDVRGNLPQDLSVWIDPFEVSYQIGEKGPVKVLYVDDSNEN
GCELDKEIKNSFNPEAQVFMPISDPASSVSSSPSPPFGHSAAVSPTFMPRSTQPLTFTTA
TFAATKFGSTKMKNSGRSSKVARTSPINLGLNVNVNDLLKQKAISSSMHSLYGLGLGSQQ
PPPPPQQQQQQQQQPPSQPPPPPPPPQQQQQQQQQQQQQQQQQQTSALSPNAKEFIFPNM
QGQGSSTNGMFPGDSPLNLSPLQYSNAFDVFAAYGGLNEKSFVDGLNFSLNNMQYSNQQF
QPVMAN
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgcagctggaaatccaagtagcactaaattttatcatttcctacttgtacaataagctt
cccaggagacgtgtcaacatttttggtgaagagcttgaaagacttcttaagaagaaatat
gaagggcactggtatcctgaaaagccataccgaggctcagggtttagatgtatacacgta
ggggagaaagtggacccagtgattgagcaagcatccaaagagagcggtttggacattgac
gacgttcgcggcaacctgcctcaggatctgagcgtttggatcgacccgtttgaggtttcc
taccaaattggtgaaaagggaccagtgaaggtgctgtacgtggatgacagtaatgaaaac
ggatgcgagctggataaggagatcaaaaacagctttaacccggaggcccaggttttcatg
cctataagtgacccagcctcctctgtgtccagctctccctcgccgcccttcggccactct
gctgctgtcagccccaccttcatgccccggtccactcagcctttaacctttaccactgcc
acttttgctgccaccaagtttggctccaccaaaatgaagaacagtggccgtagcagcaag
gtagcacgcacgtctcccatcaacctgggcctgaatgtgaatgtgaacgacctcctgaag
cagaaagccatctcttcctcaatgcactctctgtatgggctgggcctgggcagccagcag
ccgcctccaccgccacaacagcagcagcagcagcagcagcagccgccgtcccagccaccg
cctccacctccacctccacagcagcagcagcagcagcagcagcagcagcagcagcagcag
cagcagcagcaaacctctgctctctctcccaatgccaaggagtttatttttcctaacatg
cagggtcaaggtagtagtaccaatggaatgttcccgggtgacagcccccttaacctcagc
cccctccagtacagtaatgcctttgatgtgtttgcggcctatggcggcctcaacgagaag
tctttcgtagacggcttgaattttagcttaaataacatgcagtattctaaccagcaattc
cagcctgttatggctaactaa
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