Arvicanthis niloticus (African grass rat): 117711713
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Entry
117711713 CDS
T08817
Name
(RefSeq) VPS10 domain-containing receptor SorCS1 isoform X1
KO
K27081
VPS10 domain-containing receptor SorCS1
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
anu04131
]
117711713
Membrane trafficking [BR:
anu04131
]
Protein recycling
Others
Others
117711713
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
Motif
Other DBs
NCBI-GeneID:
117711713
NCBI-ProteinID:
XP_034363423
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Position
1:complement(156419007..156922562)
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AA seq
1192 aa
AA seq
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MGKVGAGDGSSAGLSALLAGAGLLMLLAPGVCGSLSCCPPQHPSSTPRWTHTPRGFPHSG
PLGRAPATPPPLFMRPLFTVAPGDRALFLERAGGSRVSVATAARSGRRKRSGADPEKTEP
GEGASRSRRDMLRDGGQQGPGTGARDPDKATRFRMEELRLTSTTFALTGDSAHNQAMVHW
SGHNSSVILILTKLYDYNLGSITESSLWRSTDYGTTYEKLNDKVGLKTILSYLYVCPTNK
RKIMLLTDPEIESSLLISSDEGATYQKYRLNFYIQSLLFHPRQEDWILAYSQDQKLYSSA
EFGRRWQLIQESVVPNRFYWSVMGSSKEPDLVHLEARTVDGHSIYLTCRMQNCTEANRNK
PFPGNIDPDSLIVQDDYVFVQLTSGGRPHYYVSYRRSPFAQMKLPKYALPKDMHVISTDE
NQVFAAVQEWNQNDTYNLYISDTRGVYFTLALENVQSSRGPEGNVMIDLYEVAGIKGMFL
ANKKIDNQVKTFITYNKGRDWRLLQAPDADLRGDPVHCLLPYCSLHLHLKVSENPYTSGI
IASRDTAPSIIVASGNIGSELSDSDISMFVSSDAGNTWRQIFEEEHSILYLDQGGVLVAM
KHTSLPIRHLWLSFDEGRSWSKYSFTSIPLFVDGVLGEPGEETLIMTVFGHFSHRSEWQL
VKVDYKSIFDRRCAEEDYRPWQLHSQGEACIMGAKRIYKKRKSERKCMQGKYAGAMESEP
CVCTEADFDCDYGYERHSNGQCLPAFWFNPSSLSKDCSLGQSYLNSTGYRKVVSNNCTDG
VREQYTAKPQKCPGKAPRGLRIVTADGKLTAEQGHNVTLMVQLEEGDVQRTLIQVDFGDG
IAVSYVNLSSMEDGIKHVYQNVGIFRVTVQVDNSLGSDSAVLYLHVTCPLEHVHLSLPFV
TTKNKEVNATAVLWPSQVGTLTYVWWYGNNTEPLITLEGSISFKFTSEGMNTITVQVSAG
NAILQDTKTIAVYEEFRSLRLAFSPNLDDYNPDIPEWRRDISRVIKKSLVEATGIPSQHI
LVAVLPGLPTAAELFVLPYQDGTRENKRSPEDLEQISEVLIHKLNQNLVHFELKPGVQVL
VHAAHLTAAPLVDLTPTHSGSAMLMLLSVVFVGLAVFVIYKFKRGWRDRSAVKNIGCSCR
GPGFNSQHQQGGSQASVTSVPRDPTPSSGLHGHQEHTWCTDIHPGKTPIHIK
NT seq
3579 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaagttggcgccggggacggctcctcggccgggctgagcgcgctcctagcggga
gcggggcttttgatgctcttagcccccggcgtctgcggcagcctctcttgctgccctccg
cagcaccctagctctaccccacgctggacccataccccaagaggctttcctcactcggga
ccgctgggtcgggctcctgccacgcccccgcccctcttcatgagacccctgttcacagtg
gcccccggggaccgggcgctctttctggagcgagctgggggcagcagggtgtcagtggcc
accgctgcacgttctggccgtaggaaacggagtggagctgatcccgagaagactgaaccc
ggagagggtgcgagtcggagccgccgggacatgctaagggatggagggcagcaggggcct
gggactggcgcgcgggacccggacaaagccacccgcttccggatggaagagctgagactg
accagcaccacatttgcgctgacgggagactcggcacacaaccaagctatggtccactgg
tctggccacaacagcagcgtgattctcattttgacaaagctctatgactataacctgggg
agcatcacggagagctcactttggaggtcaaccgattatgggacaacttatgaaaagctc
aatgataaagtggggttgaagacaattttgagctatctgtatgtatgtccaaccaacaag
cgtaagattatgttactcacagacccggagattgagagcagtttgttgatcagctcggat
gaaggggcaacctatcaaaagtaccggctcaacttttacatccagagtttgcttttccat
ccaaggcaagaagactggatcctggcatacagtcaagaccaaaagttatacagctctgct
gagtttggcagaagatggcagcttatccaggaatcagtggtaccaaataggttctactgg
tctgtgatggggtcgagcaaagaaccagaccttgtgcatctagaggccaggaccgtggat
ggtcactcaatatacctaacttgtcgaatgcagaactgcactgaagccaacagaaacaag
cctttcccaggcaacatcgacccagactctttgattgttcaggatgactatgtgtttgtg
cagctgacgtcaggaggaagaccacattactacgtgtcctaccgaagaagcccatttgcg
caaatgaagcttccgaaatacgccttgcctaaggacatgcatgtcattagcacggatgag
aaccaagtgtttgcagccgtccaagaatggaaccagaacgacacctacaacctgtacatc
tctgacacacgtggggtctacttcacgctggccttggagaatgtgcagagcagcagaggc
cctgaaggcaatgtcatgattgatctttatgaggtagcagggataaagggaatgttcttg
gctaacaagaagattgacaaccaagtaaagactttcatcacatacaacaaaggcagagac
tggcgtttgctgcaggctccagatgcagatctaaggggggaccctgtgcactgtttactg
ccttactgctcactacaccttcatctgaaggtctctgagaatccctacacatctggaatc
attgccagcagagacacagccccaagtattatagtcgcatcaggtaacataggctctgag
ttgtcagacagtgacatcagcatgtttgtatcttcagatgcagggaacacttggaggcag
atttttgaagaagaacacagcattttgtaccttgatcaagggggagtcctggttgctatg
aaacacacatctctcccaattcgacatctttggttgagttttgatgaagggagatcttgg
agcaaatacagttttacatccattccactttttgtggatggagttctgggggagcctgga
gaagagacactaatcatgacagtgtttggacactttagtcaccgttccgaatggcagctg
gtcaaagtggattacaagtccatttttgatcgacgctgtgccgaagaagactacagaccc
tggcagctacatagccagggggaagcatgcatcatgggagccaagaggatatataagaag
cggaagtctgagcggaagtgtatgcagggaaagtatgcgggagcaatggagtctgagcct
tgtgtgtgtacagaggcagattttgactgtgactatggctatgagagacacagtaatgga
caatgcctgccagcattttggttcaacccatcctcactgtcaaaagactgcagcttggga
cagagttacctcaacagcactgggtataggaaggtggtctccaataactgtactgatgga
gtgagagagcagtacaccgccaagccacagaagtgtccagggaaggcccctcgtgggctg
cggattgtcactgcagatgggaaactgacagcagaacaggggcacaatgtcaccctcatg
gtgcagttggaagagggtgatgtgcagcggacactcatccaagtggacttcggagatggc
attgcagtgtcttatgtcaacctcagctctatggaggatggaatcaagcatgtatatcag
aatgtgggcattttccgagtgaccgtgcaggtggacaacagtctggggtctgacagcgcc
gtcctgtacttacatgtaacttgtcccctggagcatgtacacctgtcccttccttttgtc
acaacaaagaacaaagaggtcaacgcaacggcagtgctttggcccagccaagtgggcacg
ctcacttacgtgtggtggtatgggaacaacacagagcccctgatcaccttggaggggagc
atatcgtttaagtttacttctgaagggatgaatacgatcacagtacaggtctccgctggg
aatgccatactgcaagacacaaagaccattgcggtatatgaggaatttcggtctcttcgc
ttggctttttctccaaacttggatgactacaaccctgacatcccggagtggaggagggac
atcagccgagtaatcaaaaagtctctggtggaagccacagggattcccagccagcacatc
ctggtggcagtgttacctggcttacccactgctgctgagctctttgtgttgccctatcaa
gatggaaccagagaaaacaagagatcaccagaggacctggagcagatatctgaagttcta
atccacaaactcaaccaaaacttggtgcacttcgagctgaagcctggggtccaagttctt
gtccacgcagctcacctaacagcagccccactggtggacctcactcctacccacagcgga
tctgccatgctgatgttgctctcagtggtattcgtggggctggccgtattcgtcatctac
aagtttaaaagaggctggagagatcgctcagcagttaagaacattggctgttcttgcaga
ggacccgggttcaattctcagcaccaacaaggtggctcacaagcatctgtaacttcagtt
ccaagagatccgacaccctcttctggcctccatgggcaccaagaacacacgtggtgcaca
gatatacacccaggaaaaacacccatacacataaaataa
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