Arvicanthis niloticus (African grass rat): 117711738
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Entry
117711738 CDS
T08817
Symbol
Brip1
Name
(RefSeq) Fanconi anemia group J protein
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu03440
Homologous recombination
anu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
117711738 (Brip1)
03460 Fanconi anemia pathway
117711738 (Brip1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
anu03400
]
117711738 (Brip1)
Enzymes [BR:
anu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
117711738 (Brip1)
DNA repair and recombination proteins [BR:
anu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
117711738 (Brip1)
FA (Fanconi anemia) pathway
Downstream FA components
117711738 (Brip1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
DEAD
ARCH_RTEL1
HBB
DUF1866
Motif
Other DBs
NCBI-GeneID:
117711738
NCBI-ProteinID:
XP_034363472
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All DBs
Position
6:35916320..36036461
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AA seq
1167 aa
AA seq
DB search
MSSVSSEYTIGGVKIHFPCKAYPAQLAMMNSIVRGLNSSQHCLLESPTGSGKSLALLCSA
LAWQQSLSGKPVNEGLNKKPETPSSCCCACHSKNFTYSDTNLDTSPHFSPSKPSSEGNGV
SSPCRDSPGKNTLAAKLSARKQASVHRDEDDDFQVEKKRIRPLETAQQIRKRHCLEKDVH
HLDARLASEKRVKPESPVRKTSSSFQNPDGLCSRCHCSTKQGDNEESANTVKKDHGGQSK
RPKIYFGTRTHKQIAQITRELRKTAYSGVPMTILSSRDHTCVHPEVVGNFNRNEKCMELL
DGKHGKSCYFYHGVHKISNQQTLQYFPGMSKAWDIEELVSLGRKLKACPYYTARELIDDA
DIIFCPYNYLLDPQIRESMDIKLKEQVVILDEAHNIEECARESASYSVTEVQLRFARDEL
DSLINSNIRKKNHEPLRDVCYNLINWLETNSEHLVERSYESSCKIWSGNEMLLNLYRMGI
TAATFSGLQRHLIAVLQKEEKATSIYGKEESIQIPIISASTQIMLKGLFMVLDYLFRENS
RFADDYKVAIQQTYSWTNQIAIFDKSAVLAVPKNKKHSRQKIGVNVLNFWCLNPAVAFSD
INDKVRTIVLTSGTLSPLKSFSSELGVTFNIQLEANHVISNSQVWVGTVGSGPKGRNLCA
TFQHTETFEFQDEVGMLLLSVCQTVSQGILCFLPSYKLLEKLKERWIFTGLWHSLESVKT
VIAEPQGGEKTDFDELLQVYYDAIKFKGEKDGALLIAVCRGKVSEGLDFSDDNARAVITV
GIPFPNVKDLQVELKRQYNDHHSQLKGLLPGRQWYEIQAYRALNQALGRCIRHKNDWGAL
ILVDDRFNNNPKRYISGLSKWVRQQVQHHSTFASALESLTEFSRRHQKVTNRSKKDEKCI
RDNEPTLEVACLEDSTIPSVSEASHQSPENSTEETKVCVQELQYPQMAAKNPSVPSHGVS
RRKKSDPGLREESVQTIKTEKKEISRSSSPIFGKQTEPVNWPIFNSLRRHFTSKVKNCTP
GLKSSKNHASGSSTFNKTALPLTSKCVSSNETANTSLAPCPQSEVIISSVKVDTTPAENH
SKQMFFSGKDPHPDTELSLDTEETNCSSSSKADETEVDGDSVCFSPELFDPVDTDEENTE
LVETNGSRNNSDCSSAEEPFETGFGQK
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcagtgtcatctgaatacaccatcggtggggtgaagattcactttccctgtaaa
gcttatccagcacagcttgctatgatgaattctattgtcagaggactaaacagtagccaa
cattgtttgttggagagtcccacaggaagtggaaaaagtttagccttactttgttctgca
ttagcatggcaacaatctcttagtgggaagcccgtgaatgagggcctgaataaaaagcct
gagacgccatcttcatgttgttgtgcatgccattcaaagaattttacctacagtgacaca
aacttggatacttcacctcatttcagtccaagtaaaccatcttctgaaggaaatggagtc
tcatcaccctgtcgagactctcctggaaaaaatactctggctgcaaagttatctgccagg
aaacaggcatccgtacacagagatgaagatgatgactttcaggtagagaagaaacgaatc
cgacccttagaaactgcacagcagatcagaaaacgtcattgtttagaaaaggacgtccac
catttagatgcacgactagcttcggaaaagagagtaaagcctgagtctcctgtaagaaag
acaagctcttctttccaaaatcctgatggcctttgttccaggtgccattgttctactaaa
caaggagacaacgaagagtctgcaaacactgttaagaaagatcacgggggacaatccaag
agacctaaaatttattttgggacacgaacacacaagcagattgctcagattactagagag
ctccgtaagacagcttactcaggggtcccgatgactattctttccagcagggatcatacc
tgtgttcatcctgaagtagtgggaaacttcaacagaaatgaaaagtgcatggaattgctg
gatggaaaacatgggaagtcctgctatttctatcatggtgttcataaaattagtaatcag
cagacgttgcagtattttccggggatgtccaaagcctgggacatagaagaacttgtcagc
cttgggaggaaactgaaagcttgtccttactatacagctcgagaactgatagatgatgct
gacataattttttgtccctataactacctcttagacccacaaataagggaaagtatggat
ataaagctaaaagaacaagttgtcattttagatgaagctcataacattgaagagtgtgct
cgggaatcagcaagctacagtgtaacagaagttcagctaaggtttgctcgggatgagcta
gatagtttgatcaacagtaatataaggaagaaaaaccatgagcccctacgagatgtgtgc
tataacctcatcaattggttagaaacaaattctgagcatcttgtagaaaggagttatgaa
tcgtcttgtaaaatatggagtggaaatgagatgctcttaaacttatacagaatgggtatc
actgctgctactttttctggtttgcagagacatctcatagctgttcttcaaaaagaagaa
aaagccacatcaatctatggtaaagaggagtcaatacaaatacctattattagtgcgtca
actcaaatcatgcttaaaggtctttttatggtgcttgactatctctttagagagaatagc
agatttgcagatgattataaagttgctattcaacagacttactcctggacaaatcagatt
gctatttttgataaaagtgctgtcttggctgtaccaaaaaataagaaacattcacgacag
aaaattggagttaatgtgcttaacttttggtgcttaaatccagctgtggccttttcagat
attaatgacaaagtacggaccattgttctaacatcaggaacgctgtcacccctgaaatcc
ttttcatctgagcttggtgtcacatttaacattcaactggaggctaatcatgtcatcagt
aactcccaggtttgggttggtactgttggctcaggccctaagggtcggaatctctgcgct
accttccagcacactgaaacatttgagttccaggacgaagtgggaatgcttctgttatct
gtgtgccagactgtgagccaaggaattctgtgctttttgccatcttacaagctattagag
aaattaaaagaacgttggatttttactggcttatggcatagtttagagtcagtgaagaca
gtcatcgcagaaccccaaggaggagagaaaactgattttgatgagttgctgcaggtgtac
tatgatgccatcaagttcaaaggagagaaggatggagcccttctcatagcagtttgccgt
ggcaaggtgagcgagggtctggatttctcagatgataatgcccgtgctgtcataaccgta
gggattcctttcccaaatgtgaaggatcttcaggtggaactaaaacgacagtacaatgac
caccactcacaattgaaaggtcttctgcctggccgtcagtggtatgaaatccaagcatac
agagccttgaatcaggctctaggcaggtgtattcgacacaaaaatgactggggagctctt
attctagtggatgatcgtttcaataacaatccaaagcgctatatatcgggactttctaaa
tgggtgaggcagcaggttcagcaccactcaacctttgcaagtgccttggagtccctgact
gagttctctagaagacaccagaaagttactaatagatccaaaaaggacgaaaaatgtata
agagacaatgagcctactctggaagtggcctgtttggaggatagcactattccaagtgtg
tcagaagcaagtcatcagtcaccagaaaactctacagaagaaacaaaagtgtgtgtccag
gagctgcagtatcctcagatggctgctaaaaacccctcagtaccaagtcatggcgtttcc
aggaggaagaaaagtgatccaggactaagagaagagtctgttcagacaataaaaacagaa
aaaaaagagatttcccgatcttcaagcccaatttttggaaagcaaacagagccagtcaac
tggcctatctttaattctttgagacgacatttcactagtaaagtaaaaaattgcacacct
gggcttaagtcatcaaagaaccatgcctctggttcttccaccttcaataaaactgctttg
ccactcacaagtaaatgtgtgtcttcaaatgaaacagcaaacacatcattggcaccttgc
cctcagtcagaagtcatcatttcatcagtgaaggttgacactactcctgctgagaaccat
tccaaacagatgttcttctctgggaaagacccacacccagatactgaattgtctctggat
actgaagaaaccaactgctccagctcaagtaaagctgatgaaacagaagtggatggcgac
tctgtgtgtttctcacctgaactttttgatcctgtcgatacggacgaagaaaacactgag
ctagttgaaactaatggatcccgtaataattcagattgttcttcagctgaagagcctttt
gaaactggatttgggcagaagtga
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integrated database retrieval system
